FFCP PHASE1:Hg19::chr8:69765397..69765409,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-399bp_to_ENST00000522354_5end | |association_with_transcript=-399bp_to_ENST00000522354_5end | ||
|cluster_id=chr8:69765397..69765409,- | |||
|description=CAGE_peak_2_at_ENST00000522354_5end | |description=CAGE_peak_2_at_ENST00000522354_5end | ||
|id=chr8:69765397..69765409,- | |id=chr8:69765397..69765409,- | ||
|ontology_enrichment_celltype=CL:0000197!3.81e-16!6;CL:0000098!3.81e-16!6;CL:0002167!3.81e-16!6;CL:0002589!1.67e-12!2;CL:0002569!4.39e-09!6;CL:0002564!3.25e-08!3;CL:0000342!5.69e-07!1;CL:0002565!5.69e-07!1 | |ontology_enrichment_celltype=CL:0000197!3.81e-16!6;CL:0000098!3.81e-16!6;CL:0002167!3.81e-16!6;CL:0002589!1.67e-12!2;CL:0002569!4.39e-09!6;CL:0002564!3.25e-08!3;CL:0000342!5.69e-07!1;CL:0002565!5.69e-07!1 | ||
|ontology_enrichment_celltype_v019=CL:0000197;7.46e-34;6!CL:0000098;7.46e-34;6!CL:0002167;7.46e-34;6!CL:0000222;1.42e-13;1!CL:0002595;6.79e-11;5!CL:0000710;2.24e-10;20!CL:0002569;2.72e-09;6!CL:0000075;9.74e-08;27!CL:0002589;1.16e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000197,5.80e-34,6;CL:0000098,5.80e-34,6;CL:0002167,5.80e-34,6;CL:0002595,6.15e-11,5;CL:0000710,2.08e-10,20;CL:0002569,3.02e-09,6;CL:0000075,9.24e-08,27;CL:0002589,1.20e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:5093!9.78e-14!4;DOID:1612!9.78e-14!4;DOID:3112!4.01e-07!1 | |ontology_enrichment_disease=DOID:5093!9.78e-14!4;DOID:1612!9.78e-14!4;DOID:3112!4.01e-07!1 | ||
|ontology_enrichment_disease_v019=DOID:5093;1.99e-28;4!DOID:1612;1.99e-28;4!DOID:3112;1.42e-13;1!DOID:299;3.62e-08;25 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,2.18e-28,4;DOID:1612,2.18e-28,4;DOID:3112,1.25e-13,1;DOID:299,3.62e-08,25 | |||
|ontology_enrichment_uberon=UBERON:0001529!1.67e-12!2;UBERON:0007204!1.67e-12!2;UBERON:0003422!4.39e-09!6;UBERON:0002242!3.25e-08!3;UBERON:0003068!3.25e-08!3;UBERON:0002328!3.25e-08!3;UBERON:0004880!3.25e-08!3;UBERON:0004573!1.53e-07!33;UBERON:0004571!1.53e-07!33;UBERON:0002506!5.69e-07!1;UBERON:0001769!5.69e-07!1 | |ontology_enrichment_uberon=UBERON:0001529!1.67e-12!2;UBERON:0007204!1.67e-12!2;UBERON:0003422!4.39e-09!6;UBERON:0002242!3.25e-08!3;UBERON:0003068!3.25e-08!3;UBERON:0002328!3.25e-08!3;UBERON:0004880!3.25e-08!3;UBERON:0004573!1.53e-07!33;UBERON:0004571!1.53e-07!33;UBERON:0002506!5.69e-07!1;UBERON:0001769!5.69e-07!1 | ||
|ontology_enrichment_uberon_v019=UBERON:0000310;9.07e-12;10!UBERON:0003834;6.79e-11;5!UBERON:0001533;6.79e-11;5!UBERON:0001443;9.44e-11;11!UBERON:0003422;2.72e-09;6!UBERON:0003104;4.35e-08;7!UBERON:0009142;4.35e-08;7!UBERON:0003513;4.92e-08;7!UBERON:0001529;1.16e-07;2!UBERON:0007204;1.16e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000310,9.41e-12,10;UBERON:0003834,6.15e-11,5;UBERON:0001533,6.15e-11,5;UBERON:0001443,9.76e-11,11;UBERON:0003422,3.02e-09,6;UBERON:0003513,4.58e-08,7;UBERON:0001529,1.20e-07,2;UBERON:0007204,1.20e-07,2 | |||
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|short_description=p2@ENST00000522354 | |short_description=p2@ENST00000522354 | ||
}} | }} |
Latest revision as of 19:39, 31 July 2015
Short description: | p2@ENST00000522354 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ENST00000522354_5end |
Coexpression cluster: | NA |
Association with transcript: | -399bp_to_ENST00000522354_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
receptor cell | 5.80e-34 | 6 |
sensory epithelial cell | 5.80e-34 | 6 |
olfactory epithelial cell | 5.80e-34 | 6 |
smooth muscle cell of the subclavian artery | 6.15e-11 | 5 |
neurecto-epithelial cell | 2.08e-10 | 20 |
mesenchymal stem cell of umbilical cord | 3.02e-09 | 6 |
columnar/cuboidal epithelial cell | 9.24e-08 | 27 |
smooth muscle cell of the brachiocephalic vasculature | 1.20e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
breast | 9.41e-12 | 10 |
thoracic segment blood vessel | 6.15e-11 | 5 |
subclavian artery | 6.15e-11 | 5 |
chest | 9.76e-11 | 11 |
mesenchyme of umbilical cord | 3.02e-09 | 6 |
trunk blood vessel | 4.58e-08 | 7 |
brachiocephalic artery | 1.20e-07 | 2 |
brachiocephalic vasculature | 1.20e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 2.18e-28 | 4 |
breast cancer | 2.18e-28 | 4 |
papillary adenocarcinoma | 1.25e-13 | 1 |
adenocarcinoma | 3.62e-08 | 25 |