FFCP PHASE1:Hg19::chr11:66035836..66035852,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=81876 | |EntrezGene=81876 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18370 | |HGNC=18370 | ||
|TSSclassifier=strong | |||
|UniProt=Q92928,Q9H0U4 | |UniProt=Q92928,Q9H0U4 | ||
|association_with_transcript=-151bp_to_ENST00000311481_5end | |association_with_transcript=-151bp_to_ENST00000311481_5end | ||
|cluster_id=chr11:66035836..66035852,+ | |||
|coexpression_cluster_id=C104 | |||
|description=CAGE_peak_5_at_RAB1B_5end | |description=CAGE_peak_5_at_RAB1B_5end | ||
|id=chr11:66035836..66035852,+ | |id=chr11:66035836..66035852,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002592;8.00e-18;3!CL:0000307;1.03e-17;3!CL:0000097;2.66e-11;5!CL:0000163;7.48e-07;9!CL:0002202;8.61e-07;9!CL:0002632;8.61e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002592,8.00e-18,3;CL:0000068,1.12e-17,3;CL:0000069,1.12e-17,3;CL:0000307,1.12e-17,3;CL:0000377,1.12e-17,3;CL:0000097,2.66e-11,5;CL:0002028,2.66e-11,5;CL:0000163,7.48e-07,9;CL:0002202,8.85e-07,9;CL:0002632,8.85e-07,9 | |||
|ontology_enrichment_development_v019=CL:0000377;1.03e-17;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0003498;8.00e-18;3!UBERON:0005985;8.00e-18;3!UBERON:0001621;8.00e-18;3!UBERON:0003126;2.26e-08;7!UBERON:0001005;2.26e-08;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001621,8.00e-18,3;UBERON:0003498,2.94e-11,5;UBERON:0005985,2.94e-11,5;UBERON:0003126,2.35e-08,7;UBERON:0001005,2.35e-08,7 | |||
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| ||
|short_description=p5@RAB1B | |short_description=p5@RAB1B | ||
}} | }} |
Latest revision as of 13:25, 19 September 2015
Short description: | p5@RAB1B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_RAB1B_5end |
Coexpression cluster: | C104_Mast_Basophils_immature_CD14_CD34_eye_Natural |
Association with transcript: | -151bp_to_ENST00000311481_5end |
EntrezGene: | RAB1B |
HGNC: | 18370 |
UniProt: | Q92928Q9H0U4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the coronary artery | 8.00e-18 | 3 |
duct epithelial cell | 1.12e-17 | 3 |
branched duct epithelial cell | 1.12e-17 | 3 |
tracheal epithelial cell | 1.12e-17 | 3 |
tracheoblast | 1.12e-17 | 3 |
mast cell | 2.66e-11 | 5 |
basophil mast progenitor cell | 2.66e-11 | 5 |
endocrine cell | 7.48e-07 | 9 |
epithelial cell of tracheobronchial tree | 8.85e-07 | 9 |
epithelial cell of lower respiratory tract | 8.85e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
coronary artery | 8.00e-18 | 3 |
heart blood vessel | 2.94e-11 | 5 |
coronary vessel | 2.94e-11 | 5 |
trachea | 2.35e-08 | 7 |
respiratory airway | 2.35e-08 | 7 |