FFCP PHASE1:Hg19::chr11:65265127..65265140,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=378938 | |EntrezGene=378938 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=29665 | |HGNC=29665 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-92bp_to_ENST00000534336,NR_002819,uc010roh.1_5end | |association_with_transcript=-92bp_to_ENST00000534336,NR_002819,uc010roh.1_5end | ||
|cluster_id=chr11:65265127..65265140,+ | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_10_at_MALAT1_5end | |description=CAGE_peak_10_at_MALAT1_5end | ||
|id=chr11:65265127..65265140,+ | |id=chr11:65265127..65265140,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0009117;2.49e-14;10!UBERON:0005564;2.49e-14;10 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.38e-12!115;UBERON:0001049!2.64e-07!57;UBERON:0005068!2.64e-07!57;UBERON:0006241!2.64e-07!57;UBERON:0007135!2.64e-07!57 | |ontology_enrichment_uberon=UBERON:0007023!2.38e-12!115;UBERON:0001049!2.64e-07!57;UBERON:0005068!2.64e-07!57;UBERON:0006241!2.64e-07!57;UBERON:0007135!2.64e-07!57 | ||
|ontology_enrichment_uberon_v019=UBERON:0000473;1.22e-17;8!UBERON:0003135;4.00e-13;11!UBERON:0002346;1.57e-09;4!UBERON:0000923;1.57e-09;4!UBERON:0010316;1.57e-09;4!UBERON:0005291;1.57e-09;4!UBERON:0002050;7.01e-08;5!UBERON:0005423;7.01e-08;5!UBERON:0000991;2.44e-07;21!UBERON:0003101;4.79e-07;22!UBERON:0000079;4.79e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,1.22e-17,8;UBERON:0003135,4.00e-13,11;UBERON:0000991,2.44e-07,21;UBERON:0009196,2.44e-07,21;UBERON:0009117,2.44e-07,21;UBERON:0005564,2.44e-07,21;UBERON:0004176,4.79e-07,22;UBERON:0003101,4.79e-07,22;UBERON:0000079,4.79e-07,22 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,0,0.631719873426831,0,0,0,0,0,0,0.331397375727916,0,0,0,0,0,0.204000691244253,0,0,0,0.125542639594803,0.152826811495903,0.246301768349837,0.393553906568396,0,0,0.154816123316076,0,0,0,0.154934401160603,0.142169232487422,0.293600439334847,0,0,0,0,0,0,0.145398238779565,0,0,0,0,0.309706370895104,0.575384784644301,0.256160706529101,0.236482229888585,0.344745680736619,0,0,0,0,0,0,0,0,0,0,0,0,0.56738522469114,0,0.251248665256743,0.521482918420201,0,0,0,0,0,0,0,0,0.150176892841506,0,0,0,0,0,0,0,0,0.400395987036012,0,0,0,0,0,0,0,1.12101712596307,0,0,0.393010762749165,0.205601498999509,0.167186495390678,0,0,0,0.111410456885174,0,0.221533894583621,0,0.128091319725675,0.260118695119756,0.164437904603676,0,0,0.14828656316206,0,0,0.113309342697566,0,0.68725489096526,0,0,0,0,0,0.383959833463255,0,0,0,0,0,0.144824403882799,0,0,0,0,0,0,0,0,0.189069634328136,0.221729397462564,0.087834785693126,2.94702919869853,0,0,0,0.174129737299267,0,0,0,0,0,0,0,0,0,0,0,0.258416759169329,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0,0,0,0.132409180813219,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0.168776332241266,0.0974370051611986,0,0.0920498986422993,0,0,0,0,0,0,0,0,0,0.232387885739037,0.10366105501537,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0,0,0,0,0,0,0,0,0,0,0,0.858486162094873,0,0,0,0,0,0,0,0,0,0,0.088048434013226,0.414656231081544,0.576479813667846,0.6312121671319,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0.414415513436035,0,0,0.542530047399471,0.207970861530807,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0.519254429183621,0,0.120859449591622,0,0.184161977871793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261435451024901,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255225424989168,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.507447609232169,0.764637207142375,0.569647187174163,0,0,0,0,0,0,0,0.245040215981032,0,0,0.213425530045242,0.159426272728822,0,0.383010740264733,0,0,0,0,0,0,0,0.1605880751037,0,0,0,0,0,0,0,0.556812347790485,0,0,0.33307196799782,0,0.18714054040822,0,0.242721043499027,1.11443384277478,0,0,0,0,0,0,0,0,0.422250816255987,0.19924798825107,0.552567831062295,0.503865495708552,0,0,0,0,0,0.511572370226872,0,0,0,0,0,0,0.520855522170466,0.262379999988587,0,0,0,0.236387681767936,0,0,0.173624994933292,0,0.482385754501632,0,0.110579259931225,0.591095237907095,0,0,0.139423744278603,0,0,0.23056390438806,0.0897576444097721,0,0,0,0.533034776018635,0,0,0.166211681900156,0.225595660617181,0.19606253431774,0.503464760927528,0,0,0.421996129056054,0,0,0.432777279484182,0,0.265372693510018,0,0,0,0.104421949505455,0.067401132980677,0,0,0,0.391329237864179,0,0.394584402849391,0,0,0.189559738885464,0,0,0,0,0,0,0.284609546029793,0.277349346026277,0,0.293977192243133,0.261177619741208,0.698906672968121,0,0.0967563312890851,0.0730893170861856,0,0.0969890164884194,0.0882561266915003,0,0,0.19871461170299,0.126621591911757,0,0.320635281006135,0,0,0,0,0.343189995723929,0.432164393964449,0.124252535565433,0,0.135904206073614,0,0,0,0.600420288709789,0.136905378891993,0,0.429765441419957,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0.0846733320657845,0,0.272406812223151,0,0,0,0,0,0.121499113316049,0,0.0788057072991982,0.104909176269996,0,0,0,0,0,0.25426853765475,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0,0,0,0,0,0.365377795142688,0,0,0,0,0,0.314108192500469,0.886068179966986,0,0.1251909307065,0,0.221858103073705,0.0620964029413835,0.276697269872462,0.124980407962107,0,0.285465333544967,0,0,0.28984205722165,0,0,0,0,0,0,0.228840068396924,0,0,0,0,0,0.155262956876259,0,0,0.521745061811734,0,0,0,0,0,0,0,0,0,0,0,0.192619830407303,0,0,0,0,0,0,0,0,0.176689145945881,0,0.168942440653073,0,0,0,0,0.389720617678777,0,0.490696182767533,0,0,0,0,0,0,0,0.184105950251841,0,0,0.255788742607303,0,0.157265941855896,0.218419276384028,0,1.06287460050841,0.123935764259002,0,0,0.394308725006267,0.80057074828547,0,0,0.256916900385838,0,0.319267718114302,0,0,0.138314504928436,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0.163771917510097,0,0,0,0.206686796501184,0.0634158101939068,0,0.548257766857182,0,0,0,0.535701835878287,0.336283722218824,0.606965604236632,0.455324382702595,0.0887023701626388,0.460935950223117,0,0.0679697329768317,0,0,0,0.235479278551542,0.157115589916002,0,0,0,0,0.428859265059938,0,0.116241425368125,0,0,0,0.17071847709395,0,0,0,0,0,0,0,0,0,0.294450700845729,0.243835849964539,0,0.205325613712494,0,0,0,0,0.356760272332706,0.5647304101948,0.439762066981716,0.150962843566674,0.0771741581079447,0,0,0,0,0.196308467114945,0.297046400327086,0,0,0,0,0.199882311849858,0,0,0.481448200135009,0,0.458729283404541,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0.101988829741982,0,0.0918948995348449,0,3.25848402338429,12.3263499871842,0,0.41373198344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| |phase1_expression=0.181678379270557,0,0,0,0,0,0,0.631719873426831,0,0,0,0,0,0,0.331397375727916,0,0,0,0,0,0.204000691244253,0,0,0,0.125542639594803,0.152826811495903,0.246301768349837,0.393553906568396,0,0,0.154816123316076,0,0,0,0.154934401160603,0.142169232487422,0.293600439334847,0,0,0,0,0,0,0.145398238779565,0,0,0,0,0.309706370895104,0.575384784644301,0.256160706529101,0.236482229888585,0.344745680736619,0,0,0,0,0,0,0,0,0,0,0,0,0.56738522469114,0,0.251248665256743,0.521482918420201,0,0,0,0,0,0,0,0,0.150176892841506,0,0,0,0,0,0,0,0,0.400395987036012,0,0,0,0,0,0,0,1.12101712596307,0,0,0.393010762749165,0.205601498999509,0.167186495390678,0,0,0,0.111410456885174,0,0.221533894583621,0,0.128091319725675,0.260118695119756,0.164437904603676,0,0,0.14828656316206,0,0,0.113309342697566,0,0.68725489096526,0,0,0,0,0,0.383959833463255,0,0,0,0,0,0.144824403882799,0,0,0,0,0,0,0,0,0.189069634328136,0.221729397462564,0.087834785693126,2.94702919869853,0,0,0,0.174129737299267,0,0,0,0,0,0,0,0,0,0,0,0.258416759169329,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0,0,0,0.132409180813219,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0.168776332241266,0.0974370051611986,0,0.0920498986422993,0,0,0,0,0,0,0,0,0,0.232387885739037,0.10366105501537,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0,0,0,0,0,0,0,0,0,0,0,0.858486162094873,0,0,0,0,0,0,0,0,0,0,0.088048434013226,0.414656231081544,0.576479813667846,0.6312121671319,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0.414415513436035,0,0,0.542530047399471,0.207970861530807,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0.519254429183621,0,0.120859449591622,0,0.184161977871793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261435451024901,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255225424989168,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.507447609232169,0.764637207142375,0.569647187174163,0,0,0,0,0,0,0,0.245040215981032,0,0,0.213425530045242,0.159426272728822,0,0.383010740264733,0,0,0,0,0,0,0,0.1605880751037,0,0,0,0,0,0,0,0.556812347790485,0,0,0.33307196799782,0,0.18714054040822,0,0.242721043499027,1.11443384277478,0,0,0,0,0,0,0,0,0.422250816255987,0.19924798825107,0.552567831062295,0.503865495708552,0,0,0,0,0,0.511572370226872,0,0,0,0,0,0,0.520855522170466,0.262379999988587,0,0,0,0.236387681767936,0,0,0.173624994933292,0,0.482385754501632,0,0.110579259931225,0.591095237907095,0,0,0.139423744278603,0,0,0.23056390438806,0.0897576444097721,0,0,0,0.533034776018635,0,0,0.166211681900156,0.225595660617181,0.19606253431774,0.503464760927528,0,0,0.421996129056054,0,0,0.432777279484182,0,0.265372693510018,0,0,0,0.104421949505455,0.067401132980677,0,0,0,0.391329237864179,0,0.394584402849391,0,0,0.189559738885464,0,0,0,0,0,0,0.284609546029793,0.277349346026277,0,0.293977192243133,0.261177619741208,0.698906672968121,0,0.0967563312890851,0.0730893170861856,0,0.0969890164884194,0.0882561266915003,0,0,0.19871461170299,0.126621591911757,0,0.320635281006135,0,0,0,0,0.343189995723929,0.432164393964449,0.124252535565433,0,0.135904206073614,0,0,0,0.600420288709789,0.136905378891993,0,0.429765441419957,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0.0846733320657845,0,0.272406812223151,0,0,0,0,0,0.121499113316049,0,0.0788057072991982,0.104909176269996,0,0,0,0,0,0.25426853765475,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0,0,0,0,0,0.365377795142688,0,0,0,0,0,0.314108192500469,0.886068179966986,0,0.1251909307065,0,0.221858103073705,0.0620964029413835,0.276697269872462,0.124980407962107,0,0.285465333544967,0,0,0.28984205722165,0,0,0,0,0,0,0.228840068396924,0,0,0,0,0,0.155262956876259,0,0,0.521745061811734,0,0,0,0,0,0,0,0,0,0,0,0.192619830407303,0,0,0,0,0,0,0,0,0.176689145945881,0,0.168942440653073,0,0,0,0,0.389720617678777,0,0.490696182767533,0,0,0,0,0,0,0,0.184105950251841,0,0,0.255788742607303,0,0.157265941855896,0.218419276384028,0,1.06287460050841,0.123935764259002,0,0,0.394308725006267,0.80057074828547,0,0,0.256916900385838,0,0.319267718114302,0,0,0.138314504928436,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0.163771917510097,0,0,0,0.206686796501184,0.0634158101939068,0,0.548257766857182,0,0,0,0.535701835878287,0.336283722218824,0.606965604236632,0.455324382702595,0.0887023701626388,0.460935950223117,0,0.0679697329768317,0,0,0,0.235479278551542,0.157115589916002,0,0,0,0,0.428859265059938,0,0.116241425368125,0,0,0,0.17071847709395,0,0,0,0,0,0,0,0,0,0.294450700845729,0.243835849964539,0,0.205325613712494,0,0,0,0,0.356760272332706,0.5647304101948,0.439762066981716,0.150962843566674,0.0771741581079447,0,0,0,0,0.196308467114945,0.297046400327086,0,0,0,0,0.199882311849858,0,0,0.481448200135009,0,0.458729283404541,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0.101988829741982,0,0.0918948995348449,0,3.25848402338429,12.3263499871842,0,0.41373198344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| ||
|short_description=p10@MALAT1 | |short_description=p10@MALAT1 | ||
}} | }} |
Latest revision as of 08:57, 19 September 2015
Short description: | p10@MALAT1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_MALAT1_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | -92bp_to_ENST00000534336, NR_002819, uc010roh.1_5end |
EntrezGene: | MALAT1 |
HGNC: | 29665 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
testis | 1.22e-17 | 8 |
male reproductive organ | 4.00e-13 | 11 |
gonad | 2.44e-07 | 21 |
indifferent external genitalia | 2.44e-07 | 21 |
indifferent gonad | 2.44e-07 | 21 |
gonad primordium | 2.44e-07 | 21 |
external genitalia | 4.79e-07 | 22 |
male organism | 4.79e-07 | 22 |
male reproductive system | 4.79e-07 | 22 |