FFCP PHASE1:Hg19::chr11:60780935..60780941,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:60780935..60780941,+ | |||
|coexpression_cluster_id=C1132 | |||
|description=CAGE_peak_at_chr11:60780935..60780941,+ | |description=CAGE_peak_at_chr11:60780935..60780941,+ | ||
|id=chr11:60780935..60780941,+ | |id=chr11:60780935..60780941,+ | ||
|ontology_enrichment_celltype=CL:0000084!7.48e-27!25;CL:0000827!7.48e-27!25;CL:0000791!1.89e-26!18;CL:0000789!1.89e-26!18;CL:0002420!1.89e-26!18;CL:0002419!1.89e-26!18;CL:0000790!1.89e-26!18;CL:0000838!1.25e-18!52;CL:0000542!3.66e-18!53;CL:0000051!3.66e-18!53;CL:0000624!4.53e-16!6;CL:0000625!1.29e-14!11;CL:0002087!2.71e-11!119;CL:0000738!2.93e-09!140;CL:0000898!1.01e-08!3;CL:0000842!1.15e-08!3;CL:0000623!1.73e-08!3;CL:0000825!1.73e-08!3;CL:0002031!6.85e-08!124 | |ontology_enrichment_celltype=CL:0000084!7.48e-27!25;CL:0000827!7.48e-27!25;CL:0000791!1.89e-26!18;CL:0000789!1.89e-26!18;CL:0002420!1.89e-26!18;CL:0002419!1.89e-26!18;CL:0000790!1.89e-26!18;CL:0000838!1.25e-18!52;CL:0000542!3.66e-18!53;CL:0000051!3.66e-18!53;CL:0000624!4.53e-16!6;CL:0000625!1.29e-14!11;CL:0002087!2.71e-11!119;CL:0000738!2.93e-09!140;CL:0000898!1.01e-08!3;CL:0000842!1.15e-08!3;CL:0000623!1.73e-08!3;CL:0000825!1.73e-08!3;CL:0002031!6.85e-08!124 | ||
|ontology_enrichment_celltype_v019=CL:0000791;2.19e-19;18!CL:0000789;2.19e-19;18!CL:0002419;2.19e-19;18!CL:0000084;7.73e-18;25!CL:0000624;5.98e-12;6!CL:0000625;7.60e-11;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,1.54e-19,18;CL:0000789,1.54e-19,18;CL:0002420,1.54e-19,18;CL:0002419,1.54e-19,18;CL:0000790,1.54e-19,18;CL:0000084,7.08e-18,25;CL:0000827,7.08e-18,25;CL:0000624,5.46e-12,6;CL:0000625,5.87e-11,11;CL:0000838,3.27e-10,52;CL:0000542,5.42e-10,53;CL:0000051,5.42e-10,53 | |||
|ontology_enrichment_development_v019=CL:0000790;2.19e-19;18 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!6.79e-13!15;UBERON:0000179!6.79e-13!15;UBERON:0000463!6.79e-13!15;UBERON:0001042!1.55e-08!10;UBERON:0009145!1.55e-08!10;UBERON:0006562!1.08e-07!11 | |ontology_enrichment_uberon=UBERON:0000178!6.79e-13!15;UBERON:0000179!6.79e-13!15;UBERON:0000463!6.79e-13!15;UBERON:0001042!1.55e-08!10;UBERON:0009145!1.55e-08!10;UBERON:0006562!1.08e-07!11 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;3.55e-12;15!UBERON:0000179;3.55e-12;15!UBERON:0000463;3.55e-12;15!UBERON:0000029;1.17e-08;1!UBERON:0002390;2.04e-07;32!UBERON:0002193;3.61e-07;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,4.01e-12,15;UBERON:0000179,4.01e-12,15;UBERON:0000463,4.01e-12,15;UBERON:0000029,7.75e-09,1 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787107813136792,0,0,0.154816123316076,0,0,0,0,0,0,0,0.401088894940283,0,0,0,0,0.145398238779565,0,0,0,0,0,0,0,0,0.344745680736619,0,0,0,0,0,0.306083892370903,0,0,0,0,0,0,0,0,0,0,0,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426730222566507,0,0,0,0,0,0,0,0,0,0,0.393419540227666,2.75107533924415,2.87842098599313,0.167186495390678,0.977766799900771,0.473447805734733,0,3.56513462032555,1.17842362989935,0.443067789167242,0.812411591295047,3.33037431286755,1.30059347559878,0.328875809207352,1.10540007114339,2.02862160014537,2.07601188426885,1.07016331235885,2.09071047609954,1.35971211237079,0.766440987203842,1.37450978193052,1.51811815211702,1.59282707162048,0.651083453856419,0,0.903450714466637,0.895906278080929,0,1.4206635122641,0,0.604820229674197,1.33720097891754,1.15859523106239,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,2.15627574859517,0.641715181398742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,1.50999940573032,0.853820462427555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.507447609232169,0,1.13929437434833,0,0.411362273086194,1.29694662238543,1.08006287447623,2.37937552888281,0,0,0,0,0,0.213425530045242,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153900517007594,0,0,0,0,0.31900115973192,0,0,1.02193298195737,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171594997861965,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0.157611414598396,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0.157204305099666,0,1.48849806543585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.79994958341972,0,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,0,0,0,0.0679697329768317,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218559560503957,0,0,0,0,0,0,0,0.0939839179798536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0.23806443146374,1.35636710655613,0.434523000071005,0,0,0,0.653150243690884,0.342233301085281,0.0673520530145875,0.0717222053926763,0,0,0,0,0,0,0,0,0,0.805095174364105,0 | ||
|short_description=p@chr11:60780935..60780941,+ | |short_description=p@chr11:60780935..60780941,+ | ||
}} | }} |
Latest revision as of 23:20, 23 July 2015
Short description: | p@chr11:60780935..60780941, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:60780935..60780941, + |
Coexpression cluster: | C1132_thymus_CD4_CD8_Natural_chronic_acute_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 1.54e-19 | 18 |
alpha-beta T cell | 1.54e-19 | 18 |
immature T cell | 1.54e-19 | 18 |
mature T cell | 1.54e-19 | 18 |
immature alpha-beta T cell | 1.54e-19 | 18 |
T cell | 7.08e-18 | 25 |
pro-T cell | 7.08e-18 | 25 |
CD4-positive, alpha-beta T cell | 5.46e-12 | 6 |
CD8-positive, alpha-beta T cell | 5.87e-11 | 11 |
lymphoid lineage restricted progenitor cell | 3.27e-10 | 52 |
lymphocyte | 5.42e-10 | 53 |
common lymphoid progenitor | 5.42e-10 | 53 |
Ontology term | p-value | n |
---|---|---|
blood | 4.01e-12 | 15 |
haemolymphatic fluid | 4.01e-12 | 15 |
organism substance | 4.01e-12 | 15 |
lymph node | 7.75e-09 | 1 |