FFCP PHASE1:Hg19::chr16:84328429..84328455,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr16:84328429..84328455,+
|short_description=p4@WFDC1
|description=CAGE_peak_4_at_WFDC1_5end
|association_with_transcript=28bp_to_NM_021197,uc002fhv.2,uc002fhw...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=58189 | |EntrezGene=58189 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15466 | |HGNC=15466 | ||
|TSSclassifier=strong | |||
|UniProt=Q9HC57 | |UniProt=Q9HC57 | ||
|association_with_transcript=28bp_to_NM_021197,uc002fhv.2,uc002fhw.2_5end | |||
|cluster_id=chr16:84328429..84328455,+ | |||
|coexpression_cluster_id=C418 | |||
|description=CAGE_peak_4_at_WFDC1_5end | |||
|id=chr16:84328429..84328455,+ | |||
|ontology_enrichment_celltype=CL:0000148!3.29e-07!10;CL:0000541!3.29e-07!10 | |||
|ontology_enrichment_celltype_v019=CL:0000148;7.80e-11;10!CL:0002567;6.27e-08;3!CL:0000147;2.51e-07;14 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,7.86e-11,10;CL:0000541,7.86e-11,10;CL:0002567,6.30e-08,3;CL:0000147,2.52e-07,14 | |||
|ontology_enrichment_development_v019=UBERON:0008947;9.39e-10;29 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.70e-34!115;UBERON:0000062!2.76e-12!511;UBERON:0001737!2.02e-11!9;UBERON:0000064!1.00e-09!219;UBERON:0000475!1.66e-09!365;UBERON:0003075!4.80e-09!86;UBERON:0007284!4.80e-09!86;UBERON:0000153!5.42e-09!129;UBERON:0007811!5.42e-09!129;UBERON:0001557!8.27e-09!19;UBERON:0000481!1.93e-08!347;UBERON:0000033!2.79e-08!123;UBERON:0002346!3.98e-08!90;UBERON:0003056!8.77e-08!61;UBERON:0001049!1.14e-07!57;UBERON:0005068!1.14e-07!57;UBERON:0006241!1.14e-07!57;UBERON:0007135!1.14e-07!57;UBERON:0004121!1.64e-07!169;UBERON:0003080!2.02e-07!42;UBERON:0001007!4.00e-07!155;UBERON:0001555!4.00e-07!155;UBERON:0007026!4.00e-07!155;UBERON:0003102!4.28e-07!95;UBERON:0005743!4.93e-07!86;UBERON:0000924!5.64e-07!173;UBERON:0006601!5.64e-07!173;UBERON:0002780!6.65e-07!41;UBERON:0001890!6.65e-07!41;UBERON:0006240!6.65e-07!41;UBERON:0000468!7.59e-07!659 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;1.09e-19;9!UBERON:0001557;1.09e-19;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,1.10e-19,9;UBERON:0001557,6.04e-12,19;UBERON:0007023,8.85e-10,114;UBERON:0004921,4.37e-09,118;UBERON:0001007,1.35e-08,145;UBERON:0001555,1.35e-08,145;UBERON:0007026,1.35e-08,145;UBERON:0004119,1.28e-07,160;UBERON:0000925,1.28e-07,160;UBERON:0006595,1.28e-07,160 | |||
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| ||
|short_description=p4@WFDC1 | |||
}} | }} |
Latest revision as of 03:35, 18 September 2015
Short description: | p4@WFDC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_WFDC1_5end |
Coexpression cluster: | C418_normal_Melanocyte_Hep2_cervical_umbilical_osteosarcoma_gall |
Association with transcript: | 28bp_to_NM_021197, uc002fhv.2, uc002fhw.2_5end |
EntrezGene: | WFDC1 |
HGNC: | 15466 |
UniProt: | Q9HC57 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 7.86e-11 | 10 |
melanoblast | 7.86e-11 | 10 |
light melanocyte | 6.30e-08 | 3 |
pigment cell | 2.52e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
larynx | 1.10e-19 | 9 |
upper respiratory tract | 6.04e-12 | 19 |
adult organism | 8.85e-10 | 114 |
subdivision of digestive tract | 4.37e-09 | 118 |
digestive system | 1.35e-08 | 145 |
digestive tract | 1.35e-08 | 145 |
primitive gut | 1.35e-08 | 145 |
endoderm-derived structure | 1.28e-07 | 160 |
endoderm | 1.28e-07 | 160 |
presumptive endoderm | 1.28e-07 | 160 |