FFCP PHASE1:Hg19::chr8:42044977..42044996,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr8:42044977..42044996,- | |||
|coexpression_cluster_id=C471 | |||
|description=CAGE_peak_at_chr8:42044977..42044996,- | |description=CAGE_peak_at_chr8:42044977..42044996,- | ||
|id=chr8:42044977..42044996,- | |id=chr8:42044977..42044996,- | ||
|ontology_enrichment_celltype=CL:0000183!2.14e-17!59;CL:0000680!9.73e-17!57;CL:0000056!9.73e-17!57;CL:0000355!9.73e-17!57;CL:0000192!1.04e-16!42;CL:0000514!1.04e-16!42;CL:0000187!1.61e-15!54;CL:0000359!4.99e-15!32;CL:0000393!4.62e-13!60;CL:0000211!4.62e-13!60;CL:0000222!2.77e-11!119;CL:0000055!6.36e-09!180;CL:0002494!2.26e-07!16 | |ontology_enrichment_celltype=CL:0000183!2.14e-17!59;CL:0000680!9.73e-17!57;CL:0000056!9.73e-17!57;CL:0000355!9.73e-17!57;CL:0000192!1.04e-16!42;CL:0000514!1.04e-16!42;CL:0000187!1.61e-15!54;CL:0000359!4.99e-15!32;CL:0000393!4.62e-13!60;CL:0000211!4.62e-13!60;CL:0000222!2.77e-11!119;CL:0000055!6.36e-09!180;CL:0002494!2.26e-07!16 | ||
|ontology_enrichment_celltype_v019=CL:0002595;4.07e-25;5!CL:0000359;6.35e-19;32!CL:0002593;7.89e-17;2!CL:0000650;5.13e-16;2!CL:1000500;5.13e-16;2!CL:1000618;5.13e-16;2!CL:1001318;5.13e-16;2!CL:0002173;5.13e-16;2!CL:0000192;4.61e-12;43!CL:0002591;1.74e-09;1!CL:0002379;7.26e-09;1!CL:1000306;1.14e-08;4!CL:0002547;1.14e-08;4!CL:0000669;1.83e-08;4!CL:1000507;2.56e-07;10!CL:1000494;2.56e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0002595,3.95e-25,5;CL:0000359,1.93e-18,32;CL:0002593,7.30e-17,2;CL:0000650,9.48e-16,2;CL:1000500,9.48e-16,2;CL:1000618,9.48e-16,2;CL:1001318,9.48e-16,2;CL:0002173,9.48e-16,2;CL:0000192,2.23e-13,43;CL:0000514,2.23e-13,43;CL:0000187,3.68e-10,55;CL:0000680,1.45e-09,58;CL:0000056,1.45e-09,58;CL:0000355,1.45e-09,58;CL:0002591,1.74e-09,1;CL:0000393,5.00e-09,61;CL:0000211,5.00e-09,61;CL:0002379,6.72e-09,1;CL:1000306,1.35e-08,4;CL:0002547,1.35e-08,4;CL:0000669,2.48e-08,4;CL:1000507,2.74e-07,10;CL:1000494,2.74e-07,10 | |||
|ontology_enrichment_development_v019=CL:0000514;4.61e-12;43!UBERON:0005795;8.58e-08;10 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:0060084;9.06e-25;3!DOID:127;9.06e-25;3!DOID:0060072;9.84e-19;4!DOID:3620;7.26e-09;1!DOID:3565;7.26e-09;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,8.73e-25,3;DOID:127,8.73e-25,3;DOID:0060072,9.57e-19,4;DOID:3620,6.72e-09,1;DOID:3565,6.72e-09,1 | |||
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|ontology_enrichment_uberon_v019=UBERON:0003834;4.07e-25;5!UBERON:0001533;4.07e-25;5!UBERON:0004573;1.22e-19;33!UBERON:0004571;1.22e-19;33!UBERON:0003513;5.10e-18;7!UBERON:0002456;7.89e-17;2!UBERON:0003567;5.13e-16;2!UBERON:0003838;5.13e-16;2!UBERON:0003586;5.13e-16;2!UBERON:0005169;5.13e-16;2!UBERON:0002321;5.13e-16;2!UBERON:0005215;5.13e-16;2!UBERON:0002303;5.13e-16;2!UBERON:0002319;5.13e-16;2!UBERON:0001637;5.12e-15;42!UBERON:0003509;5.12e-15;42!UBERON:0004572;5.12e-15;42!UBERON:0003914;3.68e-10;74!UBERON:0004797;1.14e-08;4!UBERON:0000415;1.14e-08;4!UBERON:0007240;1.14e-08;4!UBERON:0005742;1.14e-08;4!UBERON:0005734;1.14e-08;4!UBERON:0004664;1.14e-08;4!UBERON:0004663;1.14e-08;4!UBERON:0003891;1.83e-08;4!UBERON:0007500;2.61e-08;56!UBERON:0001981;2.61e-08;56!UBERON:0004537;2.61e-08;56!UBERON:0004211;2.56e-07;10!UBERON:0009773;2.56e-07;10!UBERON:0001231;2.56e-07;10!UBERON:0004810;2.56e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003834,3.95e-25,5;UBERON:0001533,3.95e-25,5;UBERON:0004573,7.31e-22,33;UBERON:0004571,7.31e-22,33;UBERON:0001637,1.57e-20,42;UBERON:0003509,1.57e-20,42;UBERON:0004572,1.57e-20,42;UBERON:0003513,5.00e-18,7;UBERON:0002456,7.30e-17,2;UBERON:0003567,9.48e-16,2;UBERON:0003838,9.48e-16,2;UBERON:0003586,9.48e-16,2;UBERON:0005169,9.48e-16,2;UBERON:0002321,9.48e-16,2;UBERON:0005215,9.48e-16,2;UBERON:0002303,9.48e-16,2;UBERON:0002319,9.48e-16,2;UBERON:0007500,4.46e-14,59;UBERON:0001981,4.46e-14,59;UBERON:0004537,4.46e-14,59;UBERON:0006965,4.46e-14,59;UBERON:0003914,5.17e-12,117;UBERON:0000055,5.76e-12,68;UBERON:0004872,2.57e-11,83;UBERON:0002049,3.43e-10,78;UBERON:0007798,3.43e-10,78;UBERON:0007503,4.02e-10,78;UBERON:0001134,7.35e-09,62;UBERON:0002036,7.35e-09,62;UBERON:0003082,7.35e-09,62;UBERON:0000415,1.35e-08,4;UBERON:0007240,1.35e-08,4;UBERON:0005742,1.35e-08,4;UBERON:0005734,1.35e-08,4;UBERON:0004664,1.35e-08,4;UBERON:0004663,1.35e-08,4;UBERON:0002385,1.53e-08,64;UBERON:0001015,1.53e-08,64;UBERON:0000383,1.53e-08,64;UBERON:0003891,2.48e-08,4;UBERON:0004535,4.07e-08,109;UBERON:0001009,7.64e-08,112;UBERON:0002329,1.45e-07,71;UBERON:0003059,1.45e-07,71;UBERON:0007282,1.45e-07,71;UBERON:0004290,1.45e-07,71;UBERON:0009618,1.45e-07,71;UBERON:0003077,1.93e-07,72;UBERON:0007285,1.93e-07,72;UBERON:0003498,2.17e-07,5;UBERON:0005985,2.17e-07,5;UBERON:0007524,2.55e-07,73;UBERON:0004810,2.74e-07,10 | |||
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|short_description=p@chr8:42044977..42044996,- | |short_description=p@chr8:42044977..42044996,- | ||
}} | }} |
Latest revision as of 18:30, 31 July 2015
Short description: | p@chr8:42044977..42044996, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr8:42044977..42044996, - |
Coexpression cluster: | C471_Smooth_Fibroblast_leiomyoma_mesenchymal_Mesothelial_meningioma_Prostate |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the subclavian artery | 3.95e-25 | 5 |
vascular associated smooth muscle cell | 1.93e-18 | 32 |
smooth muscle cell of the internal thoracic artery | 7.30e-17 | 2 |
mesangial cell | 9.48e-16 | 2 |
kidney interstitial cell | 9.48e-16 | 2 |
juxtaglomerular complex cell | 9.48e-16 | 2 |
renal interstitial pericyte | 9.48e-16 | 2 |
extraglomerular mesangial cell | 9.48e-16 | 2 |
smooth muscle cell | 2.23e-13 | 43 |
smooth muscle myoblast | 2.23e-13 | 43 |
muscle cell | 3.68e-10 | 55 |
muscle precursor cell | 1.45e-09 | 58 |
myoblast | 1.45e-09 | 58 |
multi-potent skeletal muscle stem cell | 1.45e-09 | 58 |
smooth muscle cell of the pulmonary artery | 1.74e-09 | 1 |
electrically responsive cell | 5.00e-09 | 61 |
electrically active cell | 5.00e-09 | 61 |
meningothelial cell | 6.72e-09 | 1 |
fibroblast of tunica adventitia of artery | 1.35e-08 | 4 |
fibroblast of the aortic adventitia | 1.35e-08 | 4 |
pericyte cell | 2.48e-08 | 4 |
kidney tubule cell | 2.74e-07 | 10 |
nephron tubule epithelial cell | 2.74e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 8.73e-25 | 3 |
leiomyoma | 8.73e-25 | 3 |
benign neoplasm | 9.57e-19 | 4 |
central nervous system cancer | 6.72e-09 | 1 |
meningioma | 6.72e-09 | 1 |