FFCP PHASE1:Hg19::chr8:38008485..38008499,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6770 | |EntrezGene=6770 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11359 | |HGNC=11359 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=10bp_to_ENST00000520114_5end | |association_with_transcript=10bp_to_ENST00000520114_5end | ||
|cluster_id=chr8:38008485..38008499,- | |||
|description=CAGE_peak_3_at_STAR_5end | |description=CAGE_peak_3_at_STAR_5end | ||
|id=chr8:38008485..38008499,- | |id=chr8:38008485..38008499,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002600;7.49e-13;2!CL:0000746;3.82e-09;3!CL:0000594;1.00e-08;3!CL:0000511;1.18e-07;1!CL:0002625;1.18e-07;1!CL:0000216;1.18e-07;1!CL:0002174;1.77e-07;1!CL:0000501;1.77e-07;1!CL:0000342;3.73e-07;1!CL:0002565;3.73e-07;1!CL:0002591;3.73e-07;1!CL:0000737;4.63e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002600,5.88e-13,2;CL:0000746,3.98e-09,3;CL:0000513,3.98e-09,3;CL:0000594,1.18e-08,3;CL:0000511,1.18e-07,1;CL:0002625,1.18e-07,1;CL:0000216,1.18e-07,1;CL:0002174,1.72e-07,1;CL:0000501,1.72e-07,1;CL:0000342,3.40e-07,1;CL:0002565,3.40e-07,1;CL:0002591,4.34e-07,1;CL:0000737,4.77e-07,4 | |||
|ontology_enrichment_development_v019=CL:0000513;3.82e-09;3 | |||
|ontology_enrichment_disease=DOID:2394!1.70e-13!14;DOID:8692!3.47e-09!31;DOID:193!1.15e-07!29;DOID:120!5.70e-07!27 | |ontology_enrichment_disease=DOID:2394!1.70e-13!14;DOID:8692!3.47e-09!31;DOID:193!1.15e-07!29;DOID:120!5.70e-07!27 | ||
|ontology_enrichment_disease_v019=DOID:2394;1.92e-27;14!DOID:193;5.96e-16;29!DOID:120;1.16e-13;27!DOID:1036;7.12e-13;8!DOID:8692;1.86e-09;31 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,1.86e-27,14;DOID:193,5.80e-16,29;DOID:120,1.14e-13,27;DOID:1036,7.68e-13,8;DOID:8692,4.22e-09,31;DOID:0050686,2.82e-08,137;DOID:1240,4.75e-07,39 | |||
|ontology_enrichment_uberon=UBERON:0001049!4.92e-21!57;UBERON:0005068!4.92e-21!57;UBERON:0006241!4.92e-21!57;UBERON:0007135!4.92e-21!57;UBERON:0002616!5.55e-20!59;UBERON:0001893!4.54e-19!34;UBERON:0002020!5.71e-19!34;UBERON:0003528!5.71e-19!34;UBERON:0001869!1.09e-18!32;UBERON:0000955!2.67e-18!69;UBERON:0006238!2.67e-18!69;UBERON:0002780!3.55e-18!41;UBERON:0001890!3.55e-18!41;UBERON:0006240!3.55e-18!41;UBERON:0002791!6.91e-18!33;UBERON:0001017!1.27e-17!82;UBERON:0003080!1.36e-17!42;UBERON:0005743!2.32e-16!86;UBERON:0003075!1.49e-15!86;UBERON:0007284!1.49e-15!86;UBERON:0000992!2.94e-15!13;UBERON:0000073!5.59e-15!94;UBERON:0001016!5.59e-15!94;UBERON:0000991!9.60e-15!21;UBERON:0009196!9.60e-15!21;UBERON:0009117!9.60e-15!21;UBERON:0005564!9.60e-15!21;UBERON:0002346!1.90e-14!90;UBERON:0004176!6.70e-14!22;UBERON:0007023!2.88e-13!115;UBERON:0002619!3.48e-12!22;UBERON:0001950!1.48e-11!20;UBERON:0002308!1.57e-11!9;UBERON:0000125!1.57e-11!9;UBERON:0003056!2.15e-11!61;UBERON:0002118!3.17e-11!5;UBERON:0004532!3.17e-11!5;UBERON:0000956!2.26e-10!25;UBERON:0000203!2.26e-10!25;UBERON:0000033!1.35e-09!123;UBERON:0000153!2.25e-09!129;UBERON:0007811!2.25e-09!129;UBERON:0002420!2.98e-09!9;UBERON:0007245!2.98e-09!9;UBERON:0010009!2.98e-09!9;UBERON:0010011!2.98e-09!9;UBERON:0000454!2.98e-09!9;UBERON:0002119!3.85e-09!4;UBERON:0004531!3.85e-09!4;UBERON:0009663!4.72e-09!7;UBERON:0000369!5.91e-08!4;UBERON:0002435!5.91e-08!4;UBERON:0000204!5.91e-08!4;UBERON:0010082!5.91e-08!4;UBERON:0000200!1.21e-07!6;UBERON:0002298!2.28e-07!8;UBERON:0000025!4.05e-07!194;UBERON:0000483!8.99e-07!309 | |ontology_enrichment_uberon=UBERON:0001049!4.92e-21!57;UBERON:0005068!4.92e-21!57;UBERON:0006241!4.92e-21!57;UBERON:0007135!4.92e-21!57;UBERON:0002616!5.55e-20!59;UBERON:0001893!4.54e-19!34;UBERON:0002020!5.71e-19!34;UBERON:0003528!5.71e-19!34;UBERON:0001869!1.09e-18!32;UBERON:0000955!2.67e-18!69;UBERON:0006238!2.67e-18!69;UBERON:0002780!3.55e-18!41;UBERON:0001890!3.55e-18!41;UBERON:0006240!3.55e-18!41;UBERON:0002791!6.91e-18!33;UBERON:0001017!1.27e-17!82;UBERON:0003080!1.36e-17!42;UBERON:0005743!2.32e-16!86;UBERON:0003075!1.49e-15!86;UBERON:0007284!1.49e-15!86;UBERON:0000992!2.94e-15!13;UBERON:0000073!5.59e-15!94;UBERON:0001016!5.59e-15!94;UBERON:0000991!9.60e-15!21;UBERON:0009196!9.60e-15!21;UBERON:0009117!9.60e-15!21;UBERON:0005564!9.60e-15!21;UBERON:0002346!1.90e-14!90;UBERON:0004176!6.70e-14!22;UBERON:0007023!2.88e-13!115;UBERON:0002619!3.48e-12!22;UBERON:0001950!1.48e-11!20;UBERON:0002308!1.57e-11!9;UBERON:0000125!1.57e-11!9;UBERON:0003056!2.15e-11!61;UBERON:0002118!3.17e-11!5;UBERON:0004532!3.17e-11!5;UBERON:0000956!2.26e-10!25;UBERON:0000203!2.26e-10!25;UBERON:0000033!1.35e-09!123;UBERON:0000153!2.25e-09!129;UBERON:0007811!2.25e-09!129;UBERON:0002420!2.98e-09!9;UBERON:0007245!2.98e-09!9;UBERON:0010009!2.98e-09!9;UBERON:0010011!2.98e-09!9;UBERON:0000454!2.98e-09!9;UBERON:0002119!3.85e-09!4;UBERON:0004531!3.85e-09!4;UBERON:0009663!4.72e-09!7;UBERON:0000369!5.91e-08!4;UBERON:0002435!5.91e-08!4;UBERON:0000204!5.91e-08!4;UBERON:0010082!5.91e-08!4;UBERON:0000200!1.21e-07!6;UBERON:0002298!2.28e-07!8;UBERON:0000025!4.05e-07!194;UBERON:0000483!8.99e-07!309 | ||
|ontology_enrichment_uberon_v019=UBERON:0000991;2.98e-40;21!UBERON:0000992;1.18e-37;13!UBERON:0002118;3.57e-31;5!UBERON:0002119;9.99e-15;4!UBERON:0003133;5.17e-12;44!UBERON:0003134;9.62e-12;33!UBERON:0002323;1.80e-10;45!UBERON:0004458;1.52e-09;48!UBERON:0003100;2.23e-09;41!UBERON:0002553;3.02e-09;52!UBERON:0000474;2.79e-08;37!UBERON:0001136;1.18e-07;1!UBERON:0001343;1.18e-07;1!UBERON:0004910;1.18e-07;1!UBERON:0004813;1.18e-07;1!UBERON:0000473;2.35e-07;8!UBERON:0003112;3.73e-07;1!UBERON:0011158;3.73e-07;1!UBERON:0002506;3.73e-07;1!UBERON:0003128;3.73e-07;1!UBERON:0001769;3.73e-07;1!UBERON:0001703;3.73e-07;1!UBERON:0002241;3.73e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000991,2.34e-40,21;UBERON:0009196,2.34e-40,21;UBERON:0009117,2.34e-40,21;UBERON:0005564,2.34e-40,21;UBERON:0004176,2.03e-38,22;UBERON:0000992,1.13e-37,13;UBERON:0002118,3.80e-31,5;UBERON:0002323,3.72e-17,46;UBERON:0003133,2.41e-16,48;UBERON:0004458,5.81e-16,49;UBERON:0002119,9.11e-15,4;UBERON:0003886,2.87e-14,54;UBERON:0005156,7.32e-13,59;UBERON:0000990,7.32e-13,59;UBERON:0002553,2.30e-12,61;UBERON:0003134,2.83e-12,37;UBERON:0000474,2.83e-12,37;UBERON:0003100,6.25e-11,41;UBERON:0001048,1.15e-08,160;UBERON:0001136,1.18e-07,1;UBERON:0001343,1.18e-07,1;UBERON:0004910,1.18e-07,1;UBERON:0005154,1.18e-07,1;UBERON:0005295,1.18e-07,1;UBERON:0004813,1.18e-07,1;UBERON:0005297,1.18e-07,1;UBERON:0005294,1.18e-07,1;UBERON:0010141,1.18e-07,1;UBERON:0005891,1.18e-07,1;UBERON:0000473,2.06e-07,8;UBERON:0002506,3.40e-07,1;UBERON:0001769,3.40e-07,1;UBERON:0003112,3.84e-07,1;UBERON:0011158,3.84e-07,1;UBERON:0003128,3.84e-07,1;UBERON:0001703,3.84e-07,1;UBERON:0002241,3.84e-07,1;UBERON:0004761,3.84e-07,1;UBERON:0009617,3.84e-07,1 | |||
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| ||
|short_description=p3@STAR | |short_description=p3@STAR | ||
}} | }} |
Latest revision as of 02:58, 18 September 2015
Short description: | p3@STAR |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_STAR_5end |
Coexpression cluster: | NA |
Association with transcript: | 10bp_to_ENST00000520114_5end |
EntrezGene: | STAR |
HGNC: | 11359 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of trachea | 5.88e-13 | 2 |
cardiac muscle cell | 3.98e-09 | 3 |
cardiac muscle myoblast | 3.98e-09 | 3 |
skeletal muscle satellite cell | 1.18e-08 | 3 |
androgen binding protein secreting cell | 1.18e-07 | 1 |
seminiferous tubule epithelial cell | 1.18e-07 | 1 |
Sertoli cell | 1.18e-07 | 1 |
follicular cell of ovary | 1.72e-07 | 1 |
granulosa cell | 1.72e-07 | 1 |
pigment cell (sensu Vertebrata) | 3.40e-07 | 1 |
iris pigment epithelial cell | 3.40e-07 | 1 |
smooth muscle cell of the pulmonary artery | 4.34e-07 | 1 |
striated muscle cell | 4.77e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 1.86e-27 | 14 |
reproductive organ cancer | 5.80e-16 | 29 |
female reproductive organ cancer | 1.14e-13 | 27 |
chronic leukemia | 7.68e-13 | 8 |
myeloid leukemia | 4.22e-09 | 31 |
organ system cancer | 2.82e-08 | 137 |
leukemia | 4.75e-07 | 39 |