FFCP PHASE1:Hg19::chr10:91596826..91596839,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:91596826..91596839,+ | |||
|coexpression_cluster_id=C44 | |||
|description=CAGE_peak_at_chr10:91596826..91596839,+ | |description=CAGE_peak_at_chr10:91596826..91596839,+ | ||
|id=chr10:91596826..91596839,+ | |id=chr10:91596826..91596839,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000784;1.20e-22;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000784,1.20e-22,3 | |||
|ontology_enrichment_development_v019=UBERON:0005754;4.56e-08;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!5.16e-34!115;UBERON:0001049!1.29e-27!57;UBERON:0005068!1.29e-27!57;UBERON:0006241!1.29e-27!57;UBERON:0007135!1.29e-27!57;UBERON:0001869!3.87e-24!32;UBERON:0002616!4.01e-24!59;UBERON:0001893!5.51e-24!34;UBERON:0002020!6.84e-24!34;UBERON:0003528!6.84e-24!34;UBERON:0002791!7.24e-23!33;UBERON:0002619!7.29e-23!22;UBERON:0001017!2.04e-22!82;UBERON:0005743!6.43e-22!86;UBERON:0002780!1.72e-21!41;UBERON:0001890!1.72e-21!41;UBERON:0006240!1.72e-21!41;UBERON:0000956!4.66e-21!25;UBERON:0000203!4.66e-21!25;UBERON:0000955!4.97e-21!69;UBERON:0006238!4.97e-21!69;UBERON:0003080!9.53e-21!42;UBERON:0001950!2.12e-20!20;UBERON:0000073!1.88e-19!94;UBERON:0001016!1.88e-19!94;UBERON:0003075!6.91e-19!86;UBERON:0007284!6.91e-19!86;UBERON:0002346!2.05e-17!90;UBERON:0003056!1.31e-15!61;UBERON:0000153!8.03e-15!129;UBERON:0007811!8.03e-15!129;UBERON:0000033!5.92e-14!123;UBERON:0004121!2.47e-11!169;UBERON:0000924!1.06e-10!173;UBERON:0006601!1.06e-10!173;UBERON:0003076!5.16e-08!15;UBERON:0003057!5.16e-08!15;UBERON:0000200!7.01e-08!6;UBERON:0001871!1.69e-07!7;UBERON:0000064!2.24e-07!219;UBERON:0001872!3.94e-07!5;UBERON:0000475!5.12e-07!365 | |ontology_enrichment_uberon=UBERON:0007023!5.16e-34!115;UBERON:0001049!1.29e-27!57;UBERON:0005068!1.29e-27!57;UBERON:0006241!1.29e-27!57;UBERON:0007135!1.29e-27!57;UBERON:0001869!3.87e-24!32;UBERON:0002616!4.01e-24!59;UBERON:0001893!5.51e-24!34;UBERON:0002020!6.84e-24!34;UBERON:0003528!6.84e-24!34;UBERON:0002791!7.24e-23!33;UBERON:0002619!7.29e-23!22;UBERON:0001017!2.04e-22!82;UBERON:0005743!6.43e-22!86;UBERON:0002780!1.72e-21!41;UBERON:0001890!1.72e-21!41;UBERON:0006240!1.72e-21!41;UBERON:0000956!4.66e-21!25;UBERON:0000203!4.66e-21!25;UBERON:0000955!4.97e-21!69;UBERON:0006238!4.97e-21!69;UBERON:0003080!9.53e-21!42;UBERON:0001950!2.12e-20!20;UBERON:0000073!1.88e-19!94;UBERON:0001016!1.88e-19!94;UBERON:0003075!6.91e-19!86;UBERON:0007284!6.91e-19!86;UBERON:0002346!2.05e-17!90;UBERON:0003056!1.31e-15!61;UBERON:0000153!8.03e-15!129;UBERON:0007811!8.03e-15!129;UBERON:0000033!5.92e-14!123;UBERON:0004121!2.47e-11!169;UBERON:0000924!1.06e-10!173;UBERON:0006601!1.06e-10!173;UBERON:0003076!5.16e-08!15;UBERON:0003057!5.16e-08!15;UBERON:0000200!7.01e-08!6;UBERON:0001871!1.69e-07!7;UBERON:0000064!2.24e-07!219;UBERON:0001872!3.94e-07!5;UBERON:0000475!5.12e-07!365 | ||
|ontology_enrichment_uberon_v019=UBERON:0002619;3.17e-18;22!UBERON:0003528;1.22e-16;34!UBERON:0002020;1.22e-16;34!UBERON:0000956;5.38e-16;25!UBERON:0000203;5.38e-16;25!UBERON:0001950;2.37e-15;20!UBERON:0001869;3.23e-15;32!UBERON:0002791;1.91e-14;32!UBERON:0001893;4.45e-14;34!UBERON:0002780;5.60e-11;41!UBERON:0001890;5.60e-11;41!UBERON:0001871;2.37e-09;6!UBERON:0000073;4.36e-08;53!UBERON:0002616;4.36e-08;53!UBERON:0000998;4.56e-08;1!UBERON:0006868;4.56e-08;1!UBERON:0000955;9.06e-08;68!UBERON:0001017;5.37e-07;75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002619,2.66e-18,22;UBERON:0003528,3.80e-18,34;UBERON:0002020,3.80e-18,34;UBERON:0000956,4.62e-16,25;UBERON:0000203,4.62e-16,25;UBERON:0002791,1.15e-15,32;UBERON:0001869,1.15e-15,32;UBERON:0001950,2.05e-15,20;UBERON:0001049,2.84e-15,56;UBERON:0005068,2.84e-15,56;UBERON:0006241,2.84e-15,56;UBERON:0007135,2.84e-15,56;UBERON:0002780,7.30e-15,41;UBERON:0001890,7.30e-15,41;UBERON:0003080,7.30e-15,41;UBERON:0006240,7.30e-15,41;UBERON:0001893,1.09e-14,34;UBERON:0000073,1.35e-13,53;UBERON:0002616,1.35e-13,53;UBERON:0001017,1.18e-11,81;UBERON:0001016,2.81e-10,89;UBERON:0000955,4.80e-10,68;UBERON:0006238,4.80e-10,68;UBERON:0003075,8.38e-10,82;UBERON:0007284,8.38e-10,82;UBERON:0003056,1.58e-09,61;UBERON:0001871,1.77e-09,6;UBERON:0002346,2.98e-09,86;UBERON:0010371,1.07e-08,104;UBERON:0000998,4.72e-08,1;UBERON:0006868,4.72e-08,1 | |||
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| ||
|short_description=p@chr10:91596826..91596839,+ | |short_description=p@chr10:91596826..91596839,+ | ||
}} | }} |
Latest revision as of 16:40, 23 July 2015
Short description: | p@chr10:91596826..91596839, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:91596826..91596839, + |
Coexpression cluster: | C44_Dendritic_CD19_CD133_granulocyte_acute_thymus_immature |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
plasmacytoid dendritic cell | 1.20e-22 | 3 |
Ontology term | p-value | n |
---|---|---|
regional part of cerebral cortex | 2.66e-18 | 22 |
brain grey matter | 3.80e-18 | 34 |
gray matter | 3.80e-18 | 34 |
cerebral cortex | 4.62e-16 | 25 |
pallium | 4.62e-16 | 25 |
regional part of telencephalon | 1.15e-15 | 32 |
cerebral hemisphere | 1.15e-15 | 32 |
neocortex | 2.05e-15 | 20 |
neural tube | 2.84e-15 | 56 |
neural rod | 2.84e-15 | 56 |
future spinal cord | 2.84e-15 | 56 |
neural keel | 2.84e-15 | 56 |
regional part of forebrain | 7.30e-15 | 41 |
forebrain | 7.30e-15 | 41 |
anterior neural tube | 7.30e-15 | 41 |
future forebrain | 7.30e-15 | 41 |
telencephalon | 1.09e-14 | 34 |
regional part of nervous system | 1.35e-13 | 53 |
regional part of brain | 1.35e-13 | 53 |
central nervous system | 1.18e-11 | 81 |
nervous system | 2.81e-10 | 89 |
brain | 4.80e-10 | 68 |
future brain | 4.80e-10 | 68 |
neural plate | 8.38e-10 | 82 |
presumptive neural plate | 8.38e-10 | 82 |
pre-chordal neural plate | 1.58e-09 | 61 |
temporal lobe | 1.77e-09 | 6 |
neurectoderm | 2.98e-09 | 86 |
ecto-epithelium | 1.07e-08 | 104 |
seminal vesicle | 4.72e-08 | 1 |
seminal fluid secreting gland | 4.72e-08 | 1 |