FFCP PHASE1:Hg19::chr8:29526932..29526947,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr8:29526932..29526947,- | |||
|coexpression_cluster_id=C1021 | |||
|description=CAGE_peak_at_chr8:29526932..29526947,- | |description=CAGE_peak_at_chr8:29526932..29526947,- | ||
|id=chr8:29526932..29526947,- | |id=chr8:29526932..29526947,- | ||
|ontology_enrichment_celltype=CL:0000066!6.30e-27!254;CL:0002076!3.53e-24!43;CL:0000223!6.41e-21!59;CL:0002368!1.66e-18!13;CL:0002202!1.49e-13!9;CL:0002632!1.49e-13!9;CL:0000076!1.15e-12!62;CL:0002159!1.69e-11!13;CL:0000068!5.44e-09!3;CL:0000069!5.44e-09!3;CL:0000307!5.44e-09!3;CL:0000377!5.44e-09!3;CL:0000082!8.77e-09!19;CL:0002328!1.05e-08!3;CL:0002166!1.26e-08!3;CL:0002621!2.12e-08!3;CL:0000220!3.24e-08!246;CL:0002321!4.58e-08!248;CL:0002251!1.85e-07!21;CL:0000063!5.57e-07!578;CL:0000240!9.36e-07!6;CL:0000311!9.36e-07!6;CL:0000079!9.36e-07!6;CL:0000237!9.36e-07!6;CL:0000036!9.36e-07!6;CL:0000357!9.36e-07!6;CL:0000114!9.36e-07!6 | |ontology_enrichment_celltype=CL:0000066!6.30e-27!254;CL:0002076!3.53e-24!43;CL:0000223!6.41e-21!59;CL:0002368!1.66e-18!13;CL:0002202!1.49e-13!9;CL:0002632!1.49e-13!9;CL:0000076!1.15e-12!62;CL:0002159!1.69e-11!13;CL:0000068!5.44e-09!3;CL:0000069!5.44e-09!3;CL:0000307!5.44e-09!3;CL:0000377!5.44e-09!3;CL:0000082!8.77e-09!19;CL:0002328!1.05e-08!3;CL:0002166!1.26e-08!3;CL:0002621!2.12e-08!3;CL:0000220!3.24e-08!246;CL:0002321!4.58e-08!248;CL:0002251!1.85e-07!21;CL:0000063!5.57e-07!578;CL:0000240!9.36e-07!6;CL:0000311!9.36e-07!6;CL:0000079!9.36e-07!6;CL:0000237!9.36e-07!6;CL:0000036!9.36e-07!6;CL:0000357!9.36e-07!6;CL:0000114!9.36e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0002368;5.08e-28;13!CL:0000307;1.24e-23;3!CL:0002202;4.71e-21;9!CL:0002632;4.71e-21;9!CL:0002159;3.76e-13;14!CL:0002076;5.41e-12;42!CL:0002328;4.65e-11;3!CL:0002166;6.77e-11;3!CL:0000312;6.08e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002368,5.64e-28,13;CL:0000068,1.82e-23,3;CL:0000069,1.82e-23,3;CL:0000307,1.82e-23,3;CL:0000377,1.82e-23,3;CL:0002202,5.35e-21,9;CL:0002632,5.35e-21,9;CL:0002076,2.98e-16,42;CL:0000066,3.28e-14,253;CL:0002159,3.53e-13,14;CL:0000223,2.58e-11,58;CL:0002328,4.21e-11,3;CL:0002166,6.61e-11,3;CL:0000312,6.85e-07,5 | |||
|ontology_enrichment_development_v019=CL:0000377;1.24e-23;3 | |||
|ontology_enrichment_disease=DOID:305!6.14e-15!106;DOID:1749!1.21e-11!14;DOID:0050687!1.78e-10!143 | |ontology_enrichment_disease=DOID:305!6.14e-15!106;DOID:1749!1.21e-11!14;DOID:0050687!1.78e-10!143 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!1.37e-14!169;UBERON:0000925!1.37e-14!169;UBERON:0006595!1.37e-14!169;UBERON:0001007!1.19e-12!155;UBERON:0001555!1.19e-12!155;UBERON:0007026!1.19e-12!155;UBERON:0005153!3.46e-11!37;UBERON:0001004!9.92e-11!72;UBERON:0005911!1.59e-10!82;UBERON:0004807!5.05e-10!28;UBERON:0005157!1.40e-09!51;UBERON:0004921!2.52e-09!129;UBERON:0004185!2.52e-09!129;UBERON:0000065!2.62e-09!53;UBERON:0004802!8.77e-09!19;UBERON:0000115!8.77e-09!19;UBERON:0004815!1.05e-08!3;UBERON:0002031!1.05e-08!3;UBERON:0000077!1.32e-08!130;UBERON:0001949!2.12e-08!3;UBERON:0007196!2.93e-08!14;UBERON:0001558!2.93e-08!14;UBERON:0005178!6.16e-08!34;UBERON:0002224!6.16e-08!34;UBERON:0001041!6.56e-08!98;UBERON:0005181!1.24e-07!35;UBERON:0002048!2.42e-07!22;UBERON:0000117!2.42e-07!22;UBERON:0000171!2.42e-07!22;UBERON:0000170!2.42e-07!22;UBERON:0005597!2.42e-07!22;UBERON:0000118!2.42e-07!22;UBERON:0003729!2.67e-07!5;UBERON:0000072!3.29e-07!46;UBERON:0000161!4.37e-07!35;UBERON:0008947!8.08e-07!38;UBERON:0003258!8.08e-07!38 | |ontology_enrichment_uberon=UBERON:0004119!1.37e-14!169;UBERON:0000925!1.37e-14!169;UBERON:0006595!1.37e-14!169;UBERON:0001007!1.19e-12!155;UBERON:0001555!1.19e-12!155;UBERON:0007026!1.19e-12!155;UBERON:0005153!3.46e-11!37;UBERON:0001004!9.92e-11!72;UBERON:0005911!1.59e-10!82;UBERON:0004807!5.05e-10!28;UBERON:0005157!1.40e-09!51;UBERON:0004921!2.52e-09!129;UBERON:0004185!2.52e-09!129;UBERON:0000065!2.62e-09!53;UBERON:0004802!8.77e-09!19;UBERON:0000115!8.77e-09!19;UBERON:0004815!1.05e-08!3;UBERON:0002031!1.05e-08!3;UBERON:0000077!1.32e-08!130;UBERON:0001949!2.12e-08!3;UBERON:0007196!2.93e-08!14;UBERON:0001558!2.93e-08!14;UBERON:0005178!6.16e-08!34;UBERON:0002224!6.16e-08!34;UBERON:0001041!6.56e-08!98;UBERON:0005181!1.24e-07!35;UBERON:0002048!2.42e-07!22;UBERON:0000117!2.42e-07!22;UBERON:0000171!2.42e-07!22;UBERON:0000170!2.42e-07!22;UBERON:0005597!2.42e-07!22;UBERON:0000118!2.42e-07!22;UBERON:0003729!2.67e-07!5;UBERON:0000072!3.29e-07!46;UBERON:0000161!4.37e-07!35;UBERON:0008947!8.08e-07!38;UBERON:0003258!8.08e-07!38 | ||
|ontology_enrichment_uberon_v019=UBERON:0007196;1.42e-12;15!UBERON:0001558;1.42e-12;15!UBERON:0004815;4.65e-11;3!UBERON:0002031;4.65e-11;3!UBERON:0003126;1.91e-10;7!UBERON:0001005;1.91e-10;7!UBERON:0005178;2.64e-09;34!UBERON:0002224;2.64e-09;34!UBERON:0000065;6.75e-09;44!UBERON:0005181;1.09e-08;35!UBERON:0000072;2.01e-08;37!UBERON:0001708;2.18e-08;4!UBERON:0008895;2.18e-08;4!UBERON:0004807;2.58e-08;22!UBERON:0002185;5.73e-07;5!UBERON:0011159;7.15e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007196,1.53e-12,15;UBERON:0001558,1.53e-12,15;UBERON:0004815,4.21e-11,3;UBERON:0002031,4.21e-11,3;UBERON:0003126,2.24e-10,7;UBERON:0001005,2.24e-10,7;UBERON:0005178,4.51e-10,34;UBERON:0002224,4.51e-10,34;UBERON:0000065,5.63e-10,54;UBERON:0005181,9.23e-10,35;UBERON:0005153,4.90e-09,37;UBERON:0005157,5.16e-09,47;UBERON:0008947,6.32e-09,38;UBERON:0003258,6.32e-09,38;UBERON:0001004,1.51e-08,74;UBERON:0001708,2.15e-08,4;UBERON:0008895,2.15e-08,4;UBERON:0000915,4.09e-08,52;UBERON:0004119,1.13e-07,160;UBERON:0000925,1.13e-07,160;UBERON:0006595,1.13e-07,160;UBERON:0000072,4.65e-07,47;UBERON:0002185,5.40e-07,5;UBERON:0011159,7.05e-07,5 | |||
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| ||
|short_description=p@chr8:29526932..29526947,- | |short_description=p@chr8:29526932..29526947,- | ||
}} | }} |
Latest revision as of 17:47, 31 July 2015
Short description: | p@chr8:29526932..29526947, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr8:29526932..29526947, - |
Coexpression cluster: | C1021_Small_Bronchial_Tracheal_Mallassezderived_Gingival_Sebocyte_squamous |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
respiratory epithelial cell | 5.64e-28 | 13 |
duct epithelial cell | 1.82e-23 | 3 |
branched duct epithelial cell | 1.82e-23 | 3 |
tracheal epithelial cell | 1.82e-23 | 3 |
tracheoblast | 1.82e-23 | 3 |
epithelial cell of tracheobronchial tree | 5.35e-21 | 9 |
epithelial cell of lower respiratory tract | 5.35e-21 | 9 |
endo-epithelial cell | 2.98e-16 | 42 |
epithelial cell | 3.28e-14 | 253 |
general ecto-epithelial cell | 3.53e-13 | 14 |
endodermal cell | 2.58e-11 | 58 |
bronchial epithelial cell | 4.21e-11 | 3 |
epithelial cell of Malassez | 6.61e-11 | 3 |
keratinocyte | 6.85e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
tracheobronchial tree | 1.53e-12 | 15 |
lower respiratory tract | 1.53e-12 | 15 |
lower respiratory tract epithelium | 4.21e-11 | 3 |
epithelium of bronchus | 4.21e-11 | 3 |
trachea | 2.24e-10 | 7 |
respiratory airway | 2.24e-10 | 7 |
thoracic cavity element | 4.51e-10 | 34 |
thoracic cavity | 4.51e-10 | 34 |
respiratory tract | 5.63e-10 | 54 |
thoracic segment organ | 9.23e-10 | 35 |
epithelial bud | 4.90e-09 | 37 |
epithelial fold | 5.16e-09 | 47 |
respiratory primordium | 6.32e-09 | 38 |
endoderm of foregut | 6.32e-09 | 38 |
respiratory system | 1.51e-08 | 74 |
jaw skeleton | 2.15e-08 | 4 |
splanchnocranium | 2.15e-08 | 4 |
thoracic segment of trunk | 4.09e-08 | 52 |
endoderm-derived structure | 1.13e-07 | 160 |
endoderm | 1.13e-07 | 160 |
presumptive endoderm | 1.13e-07 | 160 |
segment of respiratory tract | 4.65e-07 | 47 |
bronchus | 5.40e-07 | 5 |
primary subdivision of cranial skeletal system | 7.05e-07 | 5 |