FFCP PHASE1:Hg19::chr10:70360260..70360271,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:70360260..70360271,+ | |||
|description=CAGE_peak_at_chr10:70360260..70360271,+ | |description=CAGE_peak_at_chr10:70360260..70360271,+ | ||
|id=chr10:70360260..70360271,+ | |id=chr10:70360260..70360271,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000333;5.72e-13;5!CL:0002553;3.20e-08;1!CL:0002321;1.62e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0002553,2.17e-08,1 | |||
|ontology_enrichment_development_v019=UBERON:0006215;1.82e-10;3!UBERON:0006241;3.92e-10;3!UBERON:0003057;3.92e-10;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:171;3.28e-11;10!DOID:169;6.77e-11;6 | |||
|ontology_enrichment_disease_v019_2=DOID:171,5.77e-11,10;DOID:169,1.04e-10,6 | |||
|ontology_enrichment_uberon=UBERON:0001049!4.63e-26!57;UBERON:0005068!4.63e-26!57;UBERON:0006241!4.63e-26!57;UBERON:0007135!4.63e-26!57;UBERON:0001017!5.99e-26!82;UBERON:0000073!3.95e-25!94;UBERON:0001016!3.95e-25!94;UBERON:0005743!2.13e-24!86;UBERON:0002616!7.73e-24!59;UBERON:0000955!5.03e-21!69;UBERON:0006238!5.03e-21!69;UBERON:0002346!7.74e-19!90;UBERON:0003075!9.10e-18!86;UBERON:0007284!9.10e-18!86;UBERON:0002780!2.84e-17!41;UBERON:0001890!2.84e-17!41;UBERON:0006240!2.84e-17!41;UBERON:0003080!1.59e-16!42;UBERON:0002020!1.07e-14!34;UBERON:0003528!1.07e-14!34;UBERON:0001893!2.08e-14!34;UBERON:0002791!6.20e-14!33;UBERON:0000153!2.44e-13!129;UBERON:0007811!2.44e-13!129;UBERON:0001869!2.84e-13!32;UBERON:0000033!1.23e-12!123;UBERON:0000924!1.48e-12!173;UBERON:0006601!1.48e-12!173;UBERON:0000956!2.97e-12!25;UBERON:0000203!2.97e-12!25;UBERON:0007023!9.79e-12!115;UBERON:0004121!1.07e-11!169;UBERON:0002619!1.48e-11!22;UBERON:0003056!2.38e-11!61;UBERON:0003076!3.61e-11!15;UBERON:0003057!3.61e-11!15;UBERON:0001950!2.92e-10!20;UBERON:0004733!7.82e-09!12;UBERON:0002028!7.82e-09!12;UBERON:0007277!7.82e-09!12;UBERON:0004732!8.22e-08!13;UBERON:0002680!5.99e-07!9;UBERON:0001895!5.99e-07!9;UBERON:0010092!5.99e-07!9 | |ontology_enrichment_uberon=UBERON:0001049!4.63e-26!57;UBERON:0005068!4.63e-26!57;UBERON:0006241!4.63e-26!57;UBERON:0007135!4.63e-26!57;UBERON:0001017!5.99e-26!82;UBERON:0000073!3.95e-25!94;UBERON:0001016!3.95e-25!94;UBERON:0005743!2.13e-24!86;UBERON:0002616!7.73e-24!59;UBERON:0000955!5.03e-21!69;UBERON:0006238!5.03e-21!69;UBERON:0002346!7.74e-19!90;UBERON:0003075!9.10e-18!86;UBERON:0007284!9.10e-18!86;UBERON:0002780!2.84e-17!41;UBERON:0001890!2.84e-17!41;UBERON:0006240!2.84e-17!41;UBERON:0003080!1.59e-16!42;UBERON:0002020!1.07e-14!34;UBERON:0003528!1.07e-14!34;UBERON:0001893!2.08e-14!34;UBERON:0002791!6.20e-14!33;UBERON:0000153!2.44e-13!129;UBERON:0007811!2.44e-13!129;UBERON:0001869!2.84e-13!32;UBERON:0000033!1.23e-12!123;UBERON:0000924!1.48e-12!173;UBERON:0006601!1.48e-12!173;UBERON:0000956!2.97e-12!25;UBERON:0000203!2.97e-12!25;UBERON:0007023!9.79e-12!115;UBERON:0004121!1.07e-11!169;UBERON:0002619!1.48e-11!22;UBERON:0003056!2.38e-11!61;UBERON:0003076!3.61e-11!15;UBERON:0003057!3.61e-11!15;UBERON:0001950!2.92e-10!20;UBERON:0004733!7.82e-09!12;UBERON:0002028!7.82e-09!12;UBERON:0007277!7.82e-09!12;UBERON:0004732!8.22e-08!13;UBERON:0002680!5.99e-07!9;UBERON:0001895!5.99e-07!9;UBERON:0010092!5.99e-07!9 | ||
|ontology_enrichment_uberon_v019=UBERON:0002370;3.72e-15;2!UBERON:0005058;3.72e-15;2!UBERON:0009113;3.72e-15;2!UBERON:0000013;5.72e-13;5!UBERON:0002410;5.72e-13;5!UBERON:0002240;3.92e-10;3!UBERON:0005174;3.92e-10;3!UBERON:0001137;3.92e-10;3!UBERON:0000922;1.29e-09;49!UBERON:0002784;5.15e-08;4!UBERON:0000010;2.02e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,3.96e-14,89;UBERON:0000013,9.59e-13,5;UBERON:0002410,9.59e-13,5;UBERON:0003076,1.24e-11,15;UBERON:0003057,1.24e-11,15;UBERON:0001049,9.72e-11,56;UBERON:0005068,9.72e-11,56;UBERON:0006241,9.72e-11,56;UBERON:0007135,9.72e-11,56;UBERON:0002240,4.31e-10,3;UBERON:0005174,4.31e-10,3;UBERON:0001137,4.31e-10,3;UBERON:0001017,5.42e-10,81;UBERON:0011216,1.99e-08,223;UBERON:0004121,3.51e-08,171;UBERON:0000924,3.51e-08,171;UBERON:0006601,3.51e-08,171;UBERON:0002370,3.84e-08,4;UBERON:0005058,3.84e-08,4;UBERON:0009113,3.84e-08,4;UBERON:0003295,3.84e-08,4;UBERON:0005562,3.84e-08,4;UBERON:0002784,4.26e-08,4;UBERON:0002346,7.77e-08,86;UBERON:0000073,2.35e-07,53;UBERON:0002616,2.35e-07,53;UBERON:0000010,2.67e-07,8;UBERON:0000974,7.13e-07,10;UBERON:0003075,7.56e-07,82;UBERON:0007284,7.56e-07,82;UBERON:0001042,7.88e-07,10;UBERON:0009145,7.88e-07,10 | |||
|phase1_expression=0.181678379270557,0,0,0,0.446961094427288,0,0,0,0,0,0,0,0,0,0.331397375727916,0,0,0,0,0.246242116153576,0.204000691244253,0.313454721478088,0.286235987131057,0.273748850145768,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0.553995408531877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150176892841506,0,0,0,0,0,0,0,0.426730222566507,0.400395987036012,0.574752439954483,0,0.954053754535364,0.569212969109448,0,0,0,0,0.263384084775077,0.393419540227666,0.393010762749165,0.205601498999509,0.83593247695339,0,0,3.89653456815823,0.334231370655521,0,0.664601683750863,0.812411591295047,0.384273959177026,0.130059347559878,0.657751618414705,0.552700035571697,0.869409257205157,0.14828656316206,0,0,0.566546713487831,0,0,0.506039384039006,1.59282707162048,0,0,0.301150238155546,0.255973222308837,0,0.473554504088034,0,0.201606743224732,0,0.144824403882799,0,0.670700859703636,0,0,0,0.144846518960824,0,0,0.283604451492204,0,0.175669571386252,0,0,0,0,0.174129737299267,0,0,0,0,0,0,0,0,0,0.275118041940067,0.208994966536811,0,0,0,0,0,0,0,0,0.17859945656816,0,0.112611480483322,0,0,0,0,0,0,0,0,0.132409180813219,0.860509862246441,0,0,0,0,0,0.134710672069688,0,0.454072282934794,0.576175924479999,0,0,0,0,0.117434498643765,0,0.140450806702248,0,0.122834317311768,0,0,0,0,0,0,0.500474079487857,0,0,0,0,0.113432183160021,0.179389635688862,0,0.211931901159562,0,0,0,0,0.168776332241266,0.194874010322397,0,0.276149695926898,0.161646056818812,0,0.10075209822764,0.169560592310488,0,0,0,0,0.530119073285941,0.232387885739037,0.207322110030741,1.00928340350251,0.36497735907583,0,0,0,0,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.737930631258681,0,0,0,0,0.277765335475589,0,0,0,0.231860809950154,0.469634776943287,0,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0.264145302039678,0.207328115540772,0.288239906833923,0.37872730027914,0.063497894292169,0,0,0,0.102827492703324,0.300343057843917,0,0,0,0.36669142910475,0.129271715757778,0,0,0,0,0,0,0.266422179016099,0,0,0,0,0,0,0,0,0,0,0,0,0.239624855491583,0,0,0,0,0.716243852959582,0,0,0,0.385029108839245,0.254094624222463,1.30139853857622,0,0.502548796003046,1.27587750330633,0,0,0,0,0,0,0.415941723061614,0,0.473107245101804,0,0.300946099727719,0,0,0,0,0.0868836144680828,0.391602314925481,0,0.206768026122887,0,0.106727557803444,0,0,0,0.248107807818777,0,0.561320188866147,0.128139149255701,0.511707249066704,0.160853921143607,0,0,0,0,0,0,0.241718899183244,0,0,0,0,0,0,0,0,0,0,1.13733384070897,0,0,0,0.270946437543853,0,0.254876273045038,0,0,0,0,0,0,0,0,0.366277859273374,0.41254749960294,0,0,0,0.48335359146061,0,0.15350367472613,0,0.537101224341368,0,0.255679882248303,0.445160178233687,0,0,0,0,0,0,0,0,0,0,0,0,0.372158369359667,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0.282810863907425,0,0,0.66343897524122,0,0,0.655894752046633,0,0,0,0.286822704408103,0.0982490410131212,0,0,0,0,0.379473173765715,0,0,0,0,0,0,0,0,0,0.507447609232169,0,0.569647187174163,0,0.411362273086194,0.648473311192717,0,0,0,0.962479855263359,0,0.557409525377156,0,0.640276590135727,0.159426272728822,0.59873811429845,0,0.423347165447766,0.973865820823666,0.280797178113459,0,0.156679895773023,0,0.50787533340481,0,0,0,0.687010689511529,0,0.223676107892416,0,0.19538809540204,0,0,0.270455678475983,0,1.4098700508785,0,0,0.36408156524854,0.222886768554957,0,0,0,0,0.994147647766298,0.422008249231538,0,0,0.211125408127993,0,0.276283915531148,0.251932747854276,0.102268682502155,0,0,0.0898683511473268,0,0,0,0,0,0,0.371072392647405,0,0,0,0,0,0,0,0,0,0.173624994933292,0,0.60298219312704,6.10326945268333,1.76926815889959,0.591095237907095,0.219385397153973,0,0,0.230850775511391,0,0,0,0,0,0,0,0,0,0,0,0,0.167821586975843,0.189753732724185,0,0,0,0.141353071433941,0.649165919226273,0,0,0.611030144933625,0,0,0.104421949505455,0.606610196826093,0,0.468528891450678,0.547364367646998,0,0,0.394584402849391,0,1.53036380815245,0,0.60129367765797,0.311064574191741,0,0.330991955875499,0,0,0,0.138674673013139,0,0,0,0,0,0,0,0,0,0,0.677942222341597,0,0.596143835108969,0.379864775735272,0.391102765469606,0.0801588202515337,0.213452994739353,0,0.144090417154106,0.114536596165916,0.514784993585894,0,0,0,0.135904206073614,0.209205692624666,0.305994652908965,0,0,0.410716136675979,0,0,0,0.558564802544508,0,0,0,0,0,0.470284307407084,0,0,0.472699093843342,0.247247575143499,0.337017719270924,0.0984274815147488,0,0.795229689809303,0.544813624446302,0.160753148465019,0.825236619583403,0.415440338029185,0,0,0.242998226632099,0,0.0788057072991982,0.157363764404994,0,0,0,0,0,0.25426853765475,0,0,0,0,0,0.511164065356265,0.113312091520126,0,0,0.904980694530854,0.66116300871345,0,0,0,0.314408610199332,0,0,0.395223263795889,0.243585196761792,0,0,0.2506898940227,0,0,0.157054096250234,0.886068179966986,0.610131324509816,0.500763722825999,1.72022758707021,0.887432412294818,0.248385611765534,0,0,0,0,0,0,0.434763085832475,0.149254802886874,0.233713309847224,0,0,0,0,0,0,0.310874401165561,0,0,0,0,0.414706207840855,0,0,0,0,0.406870733204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| ||
|short_description=p@chr10:70360260..70360271,+ | |short_description=p@chr10:70360260..70360271,+ | ||
}} | }} |
Latest revision as of 14:58, 23 July 2015
Short description: | p@chr10:70360260..70360271, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:70360260..70360271, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lung fibroblast | 2.17e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
nervous system | 3.96e-14 | 89 |
sympathetic nervous system | 9.59e-13 | 5 |
autonomic nervous system | 9.59e-13 | 5 |
posterior neural tube | 1.24e-11 | 15 |
chordal neural plate | 1.24e-11 | 15 |
neural tube | 9.72e-11 | 56 |
neural rod | 9.72e-11 | 56 |
future spinal cord | 9.72e-11 | 56 |
neural keel | 9.72e-11 | 56 |
spinal cord | 4.31e-10 | 3 |
dorsal region element | 4.31e-10 | 3 |
dorsum | 4.31e-10 | 3 |
central nervous system | 5.42e-10 | 81 |
organ system subdivision | 1.99e-08 | 223 |
ectoderm-derived structure | 3.51e-08 | 171 |
ectoderm | 3.51e-08 | 171 |
presumptive ectoderm | 3.51e-08 | 171 |
thymus | 3.84e-08 | 4 |
hemolymphoid system gland | 3.84e-08 | 4 |
thymic region | 3.84e-08 | 4 |
pharyngeal gland | 3.84e-08 | 4 |
thymus primordium | 3.84e-08 | 4 |
regional part of diencephalon | 4.26e-08 | 4 |
neurectoderm | 7.77e-08 | 86 |
regional part of nervous system | 2.35e-07 | 53 |
regional part of brain | 2.35e-07 | 53 |
peripheral nervous system | 2.67e-07 | 8 |
neck | 7.13e-07 | 10 |
neural plate | 7.56e-07 | 82 |
presumptive neural plate | 7.56e-07 | 82 |
chordate pharynx | 7.88e-07 | 10 |
pharyngeal region of foregut | 7.88e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 5.77e-11 | 10 |
neuroendocrine tumor | 1.04e-10 | 6 |