FFCP PHASE1:Hg19::chr8:23155299..23155339,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr8:23155299..23155339,- | |||
|coexpression_cluster_id=C608 | |||
|description=CAGE_peak_at_chr8:23155299..23155339,- | |description=CAGE_peak_at_chr8:23155299..23155339,- | ||
|id=chr8:23155299..23155339,- | |id=chr8:23155299..23155339,- | ||
|ontology_enrichment_celltype=CL:0000055!1.61e-40!180;CL:0000222!1.75e-26!119;CL:0000057!1.17e-23!75;CL:0000183!1.24e-18!59;CL:0000144!3.38e-18!625;CL:0000680!8.78e-17!57;CL:0000056!8.78e-17!57;CL:0000355!8.78e-17!57;CL:0000187!1.11e-16!54;CL:0000548!2.45e-16!679;CL:0000004!2.45e-16!679;CL:0000255!2.45e-16!679;CL:0000012!9.51e-16!682;CL:0002371!4.51e-15!591;CL:0000393!1.93e-14!60;CL:0000211!1.93e-14!60;CL:0000192!1.38e-13!42;CL:0000514!1.38e-13!42;CL:0000220!1.82e-13!246;CL:0002321!2.91e-13!248;CL:0000359!1.57e-10!32;CL:0000048!1.16e-09!430;CL:0000003!1.43e-09!722;CL:0000213!1.73e-09!57;CL:0000215!1.73e-09!57;CL:0000723!5.18e-09!436;CL:0002620!7.80e-09!23;CL:0000034!3.26e-08!444;CL:0002334!3.25e-07!12 | |ontology_enrichment_celltype=CL:0000055!1.61e-40!180;CL:0000222!1.75e-26!119;CL:0000057!1.17e-23!75;CL:0000183!1.24e-18!59;CL:0000144!3.38e-18!625;CL:0000680!8.78e-17!57;CL:0000056!8.78e-17!57;CL:0000355!8.78e-17!57;CL:0000187!1.11e-16!54;CL:0000548!2.45e-16!679;CL:0000004!2.45e-16!679;CL:0000255!2.45e-16!679;CL:0000012!9.51e-16!682;CL:0002371!4.51e-15!591;CL:0000393!1.93e-14!60;CL:0000211!1.93e-14!60;CL:0000192!1.38e-13!42;CL:0000514!1.38e-13!42;CL:0000220!1.82e-13!246;CL:0002321!2.91e-13!248;CL:0000359!1.57e-10!32;CL:0000048!1.16e-09!430;CL:0000003!1.43e-09!722;CL:0000213!1.73e-09!57;CL:0000215!1.73e-09!57;CL:0000723!5.18e-09!436;CL:0002620!7.80e-09!23;CL:0000034!3.26e-08!444;CL:0002334!3.25e-07!12 | ||
|ontology_enrichment_celltype_v019=CL:0000359;9.92e-09;32!CL:0000134;2.70e-08;55!CL:0000499;9.26e-08;28!CL:0000187;9.46e-08;55!CL:0000048;1.54e-07;58!CL:0002320;2.33e-07;188!CL:0002334;3.36e-07;12!CL:0000327;4.37e-07;15!CL:0000192;5.46e-07;43!CL:0002494;5.73e-07;16!CL:0000723;5.95e-07;61!CL:0000057;6.83e-07;73!CL:0002620;8.39e-07;23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,4.63e-19,76;CL:0000222,1.04e-17,121;CL:0000048,6.30e-15,427;CL:0000723,3.88e-14,433;CL:0000034,3.95e-13,441;CL:0000187,1.35e-12,55;CL:0000680,4.67e-12,58;CL:0000056,4.67e-12,58;CL:0000355,4.67e-12,58;CL:0000393,4.13e-11,61;CL:0000211,4.13e-11,61;CL:0000192,2.73e-10,43;CL:0000514,2.73e-10,43;CL:0000359,8.39e-09,32;CL:0000499,5.67e-08,28;CL:0002334,1.70e-07,12;CL:0000327,3.26e-07,15;CL:0002620,7.92e-07,23;CL:0002320,9.79e-07,361 | |||
|ontology_enrichment_development_v019=CL:0000514;5.46e-07;43 | |||
|ontology_enrichment_disease=DOID:2394!3.34e-07!14 | |ontology_enrichment_disease=DOID:2394!3.34e-07!14 | ||
|ontology_enrichment_disease_v019=DOID:2394;2.51e-08;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,7.83e-09,14 | |||
|ontology_enrichment_uberon=UBERON:0004290!5.86e-18!70;UBERON:0000914!6.38e-18!83;UBERON:0002329!6.38e-18!83;UBERON:0003077!6.38e-18!83;UBERON:0003059!6.38e-18!83;UBERON:0007282!6.38e-18!83;UBERON:0009618!6.38e-18!83;UBERON:0007285!6.38e-18!83;UBERON:0002049!1.65e-17!79;UBERON:0007798!1.65e-17!79;UBERON:0001134!1.31e-15!61;UBERON:0002036!1.31e-15!61;UBERON:0003082!1.31e-15!61;UBERON:0000486!1.91e-15!82;UBERON:0005256!6.01e-15!143;UBERON:0002385!1.96e-14!63;UBERON:0001015!1.96e-14!63;UBERON:0000383!1.96e-14!63;UBERON:0004872!2.31e-14!84;UBERON:0000055!3.20e-14!69;UBERON:0004535!1.27e-13!110;UBERON:0001637!2.15e-13!42;UBERON:0003509!2.15e-13!42;UBERON:0004572!2.15e-13!42;UBERON:0001009!5.49e-13!113;UBERON:0001981!2.75e-12!60;UBERON:0007500!2.75e-12!60;UBERON:0004537!2.75e-12!60;UBERON:0006965!2.75e-12!60;UBERON:0003914!5.56e-12!118;UBERON:0000490!6.98e-12!138;UBERON:0004573!8.08e-10!33;UBERON:0004571!8.08e-10!33;UBERON:0002100!1.86e-09!216;UBERON:0002199!8.62e-07!45;UBERON:0002416!8.62e-07!45 | |ontology_enrichment_uberon=UBERON:0004290!5.86e-18!70;UBERON:0000914!6.38e-18!83;UBERON:0002329!6.38e-18!83;UBERON:0003077!6.38e-18!83;UBERON:0003059!6.38e-18!83;UBERON:0007282!6.38e-18!83;UBERON:0009618!6.38e-18!83;UBERON:0007285!6.38e-18!83;UBERON:0002049!1.65e-17!79;UBERON:0007798!1.65e-17!79;UBERON:0001134!1.31e-15!61;UBERON:0002036!1.31e-15!61;UBERON:0003082!1.31e-15!61;UBERON:0000486!1.91e-15!82;UBERON:0005256!6.01e-15!143;UBERON:0002385!1.96e-14!63;UBERON:0001015!1.96e-14!63;UBERON:0000383!1.96e-14!63;UBERON:0004872!2.31e-14!84;UBERON:0000055!3.20e-14!69;UBERON:0004535!1.27e-13!110;UBERON:0001637!2.15e-13!42;UBERON:0003509!2.15e-13!42;UBERON:0004572!2.15e-13!42;UBERON:0001009!5.49e-13!113;UBERON:0001981!2.75e-12!60;UBERON:0007500!2.75e-12!60;UBERON:0004537!2.75e-12!60;UBERON:0006965!2.75e-12!60;UBERON:0003914!5.56e-12!118;UBERON:0000490!6.98e-12!138;UBERON:0004573!8.08e-10!33;UBERON:0004571!8.08e-10!33;UBERON:0002100!1.86e-09!216;UBERON:0002199!8.62e-07!45;UBERON:0002416!8.62e-07!45 | ||
|ontology_enrichment_uberon_v019=UBERON:0001637;2.81e-08;42!UBERON:0003509;2.81e-08;42!UBERON:0004572;2.81e-08;42!UBERON:0004573;9.16e-08;33!UBERON:0004571;9.16e-08;33!UBERON:0007500;7.66e-07;56!UBERON:0001981;7.66e-07;56!UBERON:0004537;7.66e-07;56!UBERON:0000055;7.69e-07;65 | |||
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| ||
|short_description=p@chr8:23155299..23155339,- | |short_description=p@chr8:23155299..23155339,- | ||
}} | }} |
Latest revision as of 17:07, 31 July 2015
Short description: | p@chr8:23155299..23155339, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr8:23155299..23155339, - |
Coexpression cluster: | C608_Smooth_mesenchymal_hepatic_Olfactory_Ewing_basal_Fibroblast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 4.63e-19 | 76 |
mesodermal cell | 1.04e-17 | 121 |
multi fate stem cell | 6.30e-15 | 427 |
somatic stem cell | 3.88e-14 | 433 |
stem cell | 3.95e-13 | 441 |
muscle cell | 1.35e-12 | 55 |
muscle precursor cell | 4.67e-12 | 58 |
myoblast | 4.67e-12 | 58 |
multi-potent skeletal muscle stem cell | 4.67e-12 | 58 |
electrically responsive cell | 4.13e-11 | 61 |
electrically active cell | 4.13e-11 | 61 |
smooth muscle cell | 2.73e-10 | 43 |
smooth muscle myoblast | 2.73e-10 | 43 |
vascular associated smooth muscle cell | 8.39e-09 | 32 |
stromal cell | 5.67e-08 | 28 |
preadipocyte | 1.70e-07 | 12 |
extracellular matrix secreting cell | 3.26e-07 | 15 |
skin fibroblast | 7.92e-07 | 23 |
connective tissue cell | 9.79e-07 | 361 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 7.83e-09 | 14 |