FFCP PHASE1:Hg19::chr8:23145594..23145639,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=203069 | |EntrezGene=203069 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=27329 | |HGNC=27329 | ||
|TSSclassifier=strong | |||
|UniProt=E5RIK1,Q9Y3T6 | |UniProt=E5RIK1,Q9Y3T6 | ||
|association_with_transcript=0bp_to_ENST00000519952,NM_001136108,uc003xdf.2,uc011kzt.1_5end | |association_with_transcript=0bp_to_ENST00000519952,NM_001136108,uc003xdf.2,uc011kzt.1_5end | ||
|cluster_id=chr8:23145594..23145639,+ | |||
|description=CAGE_peak_1_at_R3HCC1_5end | |description=CAGE_peak_1_at_R3HCC1_5end | ||
|id=chr8:23145594..23145639,+ | |id=chr8:23145594..23145639,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000481!8.20e-14!347;UBERON:0000477!3.50e-13!286;UBERON:0000119!5.79e-13!312;UBERON:0000483!1.25e-12!309;UBERON:0000025!6.94e-12!194;UBERON:0004111!1.97e-11!241;UBERON:0000064!6.72e-10!219;UBERON:0000475!4.69e-09!365;UBERON:0000924!1.88e-08!173;UBERON:0006601!1.88e-08!173;UBERON:0002346!2.34e-08!90;UBERON:0003103!5.28e-08!69;UBERON:0004121!6.29e-08!169;UBERON:0003075!8.93e-08!86;UBERON:0007284!8.93e-08!86;UBERON:0003914!1.46e-07!118 | |ontology_enrichment_uberon=UBERON:0000481!8.20e-14!347;UBERON:0000477!3.50e-13!286;UBERON:0000119!5.79e-13!312;UBERON:0000483!1.25e-12!309;UBERON:0000025!6.94e-12!194;UBERON:0004111!1.97e-11!241;UBERON:0000064!6.72e-10!219;UBERON:0000475!4.69e-09!365;UBERON:0000924!1.88e-08!173;UBERON:0006601!1.88e-08!173;UBERON:0002346!2.34e-08!90;UBERON:0003103!5.28e-08!69;UBERON:0004121!6.29e-08!169;UBERON:0003075!8.93e-08!86;UBERON:0007284!8.93e-08!86;UBERON:0003914!1.46e-07!118 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000119,2.68e-13,309;UBERON:0000483,5.82e-13,306;UBERON:0000025,2.47e-11,192;UBERON:0004111,3.71e-11,240;UBERON:0010314,3.76e-10,132;UBERON:0002346,1.01e-08,86;UBERON:0004121,1.26e-08,171;UBERON:0000924,1.26e-08,171;UBERON:0006601,1.26e-08,171;UBERON:0011216,3.31e-08,223;UBERON:0003075,3.96e-08,82;UBERON:0007284,3.96e-08,82;UBERON:0003103,9.57e-08,68;UBERON:0010371,2.20e-07,104;UBERON:0003914,2.41e-07,117;UBERON:0003104,3.93e-07,160;UBERON:0009142,3.93e-07,160 | |||
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| ||
|short_description=p1@R3HCC1 | |short_description=p1@R3HCC1 | ||
}} | }} |
Latest revision as of 13:34, 17 September 2015
Short description: | p1@R3HCC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_R3HCC1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000519952, NM_001136108, uc003xdf.2, uc011kzt.1_5end |
EntrezGene: | R3HCC1 |
HGNC: | 27329 |
UniProt: | E5RIK1Q9Y3T6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cell layer | 2.68e-13 | 309 |
epithelium | 5.82e-13 | 306 |
tube | 2.47e-11 | 192 |
anatomical conduit | 3.71e-11 | 240 |
structure with developmental contribution from neural crest | 3.76e-10 | 132 |
neurectoderm | 1.01e-08 | 86 |
ectoderm-derived structure | 1.26e-08 | 171 |
ectoderm | 1.26e-08 | 171 |
presumptive ectoderm | 1.26e-08 | 171 |
organ system subdivision | 3.31e-08 | 223 |
neural plate | 3.96e-08 | 82 |
presumptive neural plate | 3.96e-08 | 82 |
compound organ | 9.57e-08 | 68 |
ecto-epithelium | 2.20e-07 | 104 |
epithelial tube | 2.41e-07 | 117 |
mesenchyme | 3.93e-07 | 160 |
entire embryonic mesenchyme | 3.93e-07 | 160 |