FFCP PHASE1:Hg19::chr8:22250306..22250322,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23516 | |EntrezGene=23516 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20858 | |HGNC=20858 | ||
|TSSclassifier=strong | |||
|UniProt=E5RFF5 | |UniProt=E5RFF5 | ||
|association_with_transcript=-20bp_to_ENST00000520832_5end | |association_with_transcript=-20bp_to_ENST00000520832_5end | ||
|cluster_id=chr8:22250306..22250322,+ | |||
|coexpression_cluster_id=C29 | |||
|description=CAGE_peak_18_at_SLC39A14_5end | |description=CAGE_peak_18_at_SLC39A14_5end | ||
|id=chr8:22250306..22250322,+ | |id=chr8:22250306..22250322,+ | ||
|ontology_enrichment_celltype=CL:0000569!3.06e-09!4;CL:0000011!3.06e-09!4;CL:0000359!1.34e-08!32;CL:0002595!1.23e-07!5;CL:0002494!4.37e-07!16 | |ontology_enrichment_celltype=CL:0000569!3.06e-09!4;CL:0000011!3.06e-09!4;CL:0000359!1.34e-08!32;CL:0002595!1.23e-07!5;CL:0002494!4.37e-07!16 | ||
|ontology_enrichment_celltype_v019=CL:0000136;5.15e-25;13!CL:0002593;3.89e-11;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,9.27e-22,15;CL:0002593,4.52e-11,2 | |||
|ontology_enrichment_development_v019=UBERON:0005425;6.98e-21;1!UBERON:0003056;7.50e-08;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001009!9.06e-13!113;UBERON:0007100!4.01e-12!27;UBERON:0004872!2.67e-11!84;UBERON:0004535!1.94e-10!110;UBERON:0000055!1.36e-09!69;UBERON:0003914!2.00e-08!118;UBERON:0000948!2.24e-08!24;UBERON:0005498!2.24e-08!24;UBERON:0004140!2.24e-08!24;UBERON:0009881!2.24e-08!24;UBERON:0004141!2.24e-08!24;UBERON:0003084!2.24e-08!24;UBERON:0007005!2.24e-08!24;UBERON:0004139!2.24e-08!24;UBERON:0004291!2.24e-08!24;UBERON:0004573!2.67e-08!33;UBERON:0004571!2.67e-08!33;UBERON:0004111!4.33e-08!241;UBERON:0001637!4.69e-08!42;UBERON:0003509!4.69e-08!42;UBERON:0004572!4.69e-08!42;UBERON:0002049!1.12e-07!79;UBERON:0007798!1.12e-07!79;UBERON:0003834!1.23e-07!5;UBERON:0001533!1.23e-07!5;UBERON:0000477!1.78e-07!286;UBERON:0001981!3.18e-07!60;UBERON:0007500!3.18e-07!60;UBERON:0004537!3.18e-07!60;UBERON:0006965!3.18e-07!60;UBERON:0000486!8.47e-07!82 | |ontology_enrichment_uberon=UBERON:0001009!9.06e-13!113;UBERON:0007100!4.01e-12!27;UBERON:0004872!2.67e-11!84;UBERON:0004535!1.94e-10!110;UBERON:0000055!1.36e-09!69;UBERON:0003914!2.00e-08!118;UBERON:0000948!2.24e-08!24;UBERON:0005498!2.24e-08!24;UBERON:0004140!2.24e-08!24;UBERON:0009881!2.24e-08!24;UBERON:0004141!2.24e-08!24;UBERON:0003084!2.24e-08!24;UBERON:0007005!2.24e-08!24;UBERON:0004139!2.24e-08!24;UBERON:0004291!2.24e-08!24;UBERON:0004573!2.67e-08!33;UBERON:0004571!2.67e-08!33;UBERON:0004111!4.33e-08!241;UBERON:0001637!4.69e-08!42;UBERON:0003509!4.69e-08!42;UBERON:0004572!4.69e-08!42;UBERON:0002049!1.12e-07!79;UBERON:0007798!1.12e-07!79;UBERON:0003834!1.23e-07!5;UBERON:0001533!1.23e-07!5;UBERON:0000477!1.78e-07!286;UBERON:0001981!3.18e-07!60;UBERON:0007500!3.18e-07!60;UBERON:0004537!3.18e-07!60;UBERON:0006965!3.18e-07!60;UBERON:0000486!8.47e-07!82 | ||
|ontology_enrichment_uberon_v019=UBERON:0000941;6.98e-21;1!UBERON:0001785;6.98e-21;1!UBERON:0002464;6.98e-21;1!UBERON:0004904;6.98e-21;1!UBERON:0001021;6.98e-21;1!UBERON:0003714;3.89e-11;2!UBERON:0005162;3.89e-11;2!UBERON:0000122;3.89e-11;2!UBERON:0002456;3.89e-11;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,7.72e-21,1;UBERON:0001785,7.72e-21,1;UBERON:0002464,7.72e-21,1;UBERON:0004904,7.72e-21,1;UBERON:0001021,7.72e-21,1;UBERON:0003902,7.72e-21,1;UBERON:0005425,7.72e-21,1;UBERON:0003714,4.09e-11,2;UBERON:0005162,4.09e-11,2;UBERON:0000122,4.09e-11,2;UBERON:0002456,4.52e-11,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.487932798790507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33472061276467,0.402829317109147,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0,0,0.529636723252875,0,0,0,0,0.24666754841716,0,0.134710672069688,0,0,0,0,0.312160076830321,0,0,0,0,0,0,0,0,0,0,0,0.718618141816238,0,0,0,0,0,0,0,0,0,0,0,0.103052529238439,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0.272746120590835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0.721832238805369,0.462985512576611,0,0,0,0,0,0,0,0,0,0.179117045405697,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0.257207374262142,0,0,0,0,0,0.325736184293735,0,0,2.1100756394171,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177561725313127,0.0821271560138091,0.519254429183621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0.0890320356467374,0,0,0,0,0,0,0,0.308033580176089,0,0.869932992075073,0.18532421910392,0.572499546967965,0,0,0,0,0,0.318203247925937,0,0,0,0,0.202182481573316,0,0,0,0.243713489631284,1.05650146756755,0,0,0,0,0.66343897524122,0.438450885253763,0,0,0.202910376962704,0.30982349809975,0,0,0,0,0,0.211107635297664,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.586032717087576,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0.394573622547734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0,0.300646838828985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288950589901519,0,0,0,0.429765441419957,0,0,0,0.717873024576814,0.199679000498991,0.858452096273142,0.223171457441873,0.134366944973453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0.170388021785422,0,0.732761168390412,0,0.129282956361551,0.52893040697076,0,0,0,0.157204305099666,0,0.496166021811951,0,0,0,4.89616023032527,4.7631079864313,15.0109332614096,2.62298104567844,0,0,0,0,0.573409195690071,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0.378806010550178,0,0,0.915360273587694,0.151230923763239,0.466311601748341,0.443565449968902,0.477890301491107,0,0,0,0,0,1.6528336989694,0.761610424337591,0.406870733204662,1.45478927362048,0.214821114084977,0,0,0,0,0,0,0.192619830407303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0.159633859057151,0,0,0,0,1.42769420259154,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0.0675375846183947,0,0.206686796501184,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118332000730565,0,0,0.22910686854405,0,0,0,0,0,0,3.38787262625615,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151557396436479,0,0,0,0,0,0,0,0,0.190941474834495,0.202117188958219,0,0.342233301085281,0,0.215166616178029,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.487932798790507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33472061276467,0.402829317109147,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0,0,0.529636723252875,0,0,0,0,0.24666754841716,0,0.134710672069688,0,0,0,0,0.312160076830321,0,0,0,0,0,0,0,0,0,0,0,0.718618141816238,0,0,0,0,0,0,0,0,0,0,0,0.103052529238439,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0.272746120590835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0.721832238805369,0.462985512576611,0,0,0,0,0,0,0,0,0,0.179117045405697,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0.257207374262142,0,0,0,0,0,0.325736184293735,0,0,2.1100756394171,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177561725313127,0.0821271560138091,0.519254429183621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0.0890320356467374,0,0,0,0,0,0,0,0.308033580176089,0,0.869932992075073,0.18532421910392,0.572499546967965,0,0,0,0,0,0.318203247925937,0,0,0,0,0.202182481573316,0,0,0,0.243713489631284,1.05650146756755,0,0,0,0,0.66343897524122,0.438450885253763,0,0,0.202910376962704,0.30982349809975,0,0,0,0,0,0.211107635297664,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.586032717087576,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0.394573622547734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0,0.300646838828985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288950589901519,0,0,0,0.429765441419957,0,0,0,0.717873024576814,0.199679000498991,0.858452096273142,0.223171457441873,0.134366944973453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0.170388021785422,0,0.732761168390412,0,0.129282956361551,0.52893040697076,0,0,0,0.157204305099666,0,0.496166021811951,0,0,0,4.89616023032527,4.7631079864313,15.0109332614096,2.62298104567844,0,0,0,0,0.573409195690071,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0.378806010550178,0,0,0.915360273587694,0.151230923763239,0.466311601748341,0.443565449968902,0.477890301491107,0,0,0,0,0,1.6528336989694,0.761610424337591,0.406870733204662,1.45478927362048,0.214821114084977,0,0,0,0,0,0,0.192619830407303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0.159633859057151,0,0,0,0,1.42769420259154,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0.0675375846183947,0,0.206686796501184,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118332000730565,0,0,0.22910686854405,0,0,0,0,0,0,3.38787262625615,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151557396436479,0,0,0,0,0,0,0,0,0.190941474834495,0.202117188958219,0,0.342233301085281,0,0.215166616178029,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p18@SLC39A14 | |short_description=p18@SLC39A14 | ||
}} | }} |
Latest revision as of 11:01, 17 September 2015
Short description: | p18@SLC39A14 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_18_at_SLC39A14_5end |
Coexpression cluster: | C29_mature_adipose_Adipocyte_breast_Lymphatic_vein_heart |
Association with transcript: | -20bp_to_ENST00000520832_5end |
EntrezGene: | SLC39A14 |
HGNC: | 20858 |
UniProt: | E5RFF5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 9.27e-22 | 15 |
smooth muscle cell of the internal thoracic artery | 4.52e-11 | 2 |
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 7.72e-21 | 1 |
cranial nerve | 7.72e-21 | 1 |
nerve trunk | 7.72e-21 | 1 |
nerve connecting eye with brain | 7.72e-21 | 1 |
nerve | 7.72e-21 | 1 |
retinal neural layer | 7.72e-21 | 1 |
presumptive neural retina | 7.72e-21 | 1 |
neural tissue | 4.09e-11 | 2 |
multi cell component structure | 4.09e-11 | 2 |
neuron projection bundle | 4.09e-11 | 2 |
internal thoracic artery | 4.52e-11 | 2 |