FFCP PHASE1:Hg19::chr10:29811555..29811564,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6840 | |EntrezGene=6840 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11480 | |HGNC=11480 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000497265,uc010qdw.1_5end | |association_with_transcript=0bp_to_ENST00000497265,uc010qdw.1_5end | ||
|cluster_id=chr10:29811555..29811564,- | |||
|coexpression_cluster_id=C610 | |||
|description=CAGE_peak_35_at_SVIL_5end | |description=CAGE_peak_35_at_SVIL_5end | ||
|id=chr10:29811555..29811564,- | |id=chr10:29811555..29811564,- | ||
|ontology_enrichment_celltype=CL:0000148!4.66e-20!10;CL:0000541!4.66e-20!10;CL:0000147!4.58e-18!14;CL:0000075!1.59e-13!27;CL:0000710!2.79e-12!20;CL:0000325!1.02e-08!39;CL:0000333!1.10e-07!41;CL:0002077!6.62e-07!33;CL:0002567!8.60e-07!3 | |ontology_enrichment_celltype=CL:0000148!4.66e-20!10;CL:0000541!4.66e-20!10;CL:0000147!4.58e-18!14;CL:0000075!1.59e-13!27;CL:0000710!2.79e-12!20;CL:0000325!1.02e-08!39;CL:0000333!1.10e-07!41;CL:0002077!6.62e-07!33;CL:0002567!8.60e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000148;2.16e-63;10!CL:0002567;4.89e-53;3!CL:0000147;1.40e-45;14!CL:0000710;3.39e-32;20!CL:0000075;4.41e-24;27!CL:0002077;1.71e-17;34 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,2.16e-63,10;CL:0000541,2.16e-63,10;CL:0002567,4.89e-53,3;CL:0000147,1.40e-45,14;CL:0000710,3.39e-32,20;CL:0000075,4.41e-24,27;CL:0002077,2.69e-19,34;CL:0000333,2.02e-15,41;CL:0000133,4.41e-11,59;CL:0000221,3.00e-09,72 | |||
|ontology_enrichment_development_v019=CL:0000133;1.42e-07;59 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:1909;5.69e-21;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,5.70e-21,2 | |||
|ontology_enrichment_uberon=UBERON:0004151!9.88e-07!3 | |ontology_enrichment_uberon=UBERON:0004151!9.88e-07!3 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p35@SVIL | |short_description=p35@SVIL | ||
}} | }} |
Latest revision as of 20:52, 17 September 2015
Short description: | p35@SVIL |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_35_at_SVIL_5end |
Coexpression cluster: | C610_melanoma_Melanocyte_migratory_mycosis_cerebellum_epithelioid_retina |
Association with transcript: | 0bp_to_ENST00000497265, uc010qdw.1_5end |
EntrezGene: | SVIL |
HGNC: | 11480 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 2.16e-63 | 10 |
melanoblast | 2.16e-63 | 10 |
light melanocyte | 4.89e-53 | 3 |
pigment cell | 1.40e-45 | 14 |
neurecto-epithelial cell | 3.39e-32 | 20 |
columnar/cuboidal epithelial cell | 4.41e-24 | 27 |
ecto-epithelial cell | 2.69e-19 | 34 |
migratory neural crest cell | 2.02e-15 | 41 |
neurectodermal cell | 4.41e-11 | 59 |
ectodermal cell | 3.00e-09 | 72 |
Ontology term | p-value | n |
---|---|---|
melanoma | 5.70e-21 | 2 |