FFCP PHASE1:Hg19::chr16:745946..745972,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr16:745946..745972,-
|short_description=p4@FBXL16
|description=CAGE_peak_4_at_FBXL16_5end
|association_with_transcript=52bp_to_uc002cjb.2_5end
|EntrezGene=14...") |
No edit summary |
||
(13 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=146330 | |EntrezGene=146330 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14150 | |HGNC=14150 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=52bp_to_uc002cjb.2_5end | |||
|cluster_id=chr16:745946..745972,- | |||
|coexpression_cluster_id=C18 | |||
|description=CAGE_peak_4_at_FBXL16_5end | |||
|id=chr16:745946..745972,- | |||
|ontology_enrichment_celltype=CL:0002087!5.16e-25!119;CL:0002031!5.66e-19!124;CL:0000738!1.36e-17!140;CL:0000542!3.26e-17!53;CL:0000051!3.26e-17!53;CL:0000791!7.77e-17!18;CL:0000789!7.77e-17!18;CL:0002420!7.77e-17!18;CL:0002419!7.77e-17!18;CL:0000790!7.77e-17!18;CL:0000838!9.87e-17!52;CL:0000084!2.04e-14!25;CL:0000827!2.04e-14!25;CL:0000037!7.15e-14!172;CL:0000566!7.15e-14!172;CL:0002032!6.44e-13!165;CL:0000837!6.44e-13!165;CL:0000988!1.14e-11!182;CL:0000625!4.71e-11!11;CL:0000860!3.15e-08!45;CL:0002194!1.14e-07!63;CL:0000576!1.14e-07!63;CL:0000040!1.14e-07!63;CL:0000559!1.14e-07!63;CL:0000624!2.52e-07!6;CL:0002009!4.07e-07!65 | |||
|ontology_enrichment_celltype_v019=CL:0000791;4.89e-33;18!CL:0000789;4.89e-33;18!CL:0002419;4.89e-33;18!CL:0000084;4.64e-28;25!CL:0000625;1.87e-22;11!CL:0000624;1.79e-14;6!CL:0000542;4.85e-12;53!CL:0000898;4.38e-08;3!CL:0000226;3.91e-07;3!CL:0000842;3.91e-07;3!CL:0000623;9.52e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,2.36e-33,18;CL:0000789,2.36e-33,18;CL:0002420,2.36e-33,18;CL:0002419,2.36e-33,18;CL:0000790,2.36e-33,18;CL:0000084,2.94e-28,25;CL:0000827,2.94e-28,25;CL:0000838,4.71e-23,52;CL:0000625,8.50e-23,11;CL:0000542,1.83e-22,53;CL:0000051,1.83e-22,53;CL:0002087,1.71e-14,115;CL:0000624,1.85e-14,6;CL:0000738,8.85e-11,136;CL:0002031,1.22e-10,120;CL:0000898,4.45e-08,3;CL:0000037,1.05e-07,168;CL:0000226,3.57e-07,3;CL:0000842,3.57e-07,3;CL:0000988,7.10e-07,177 | |||
|ontology_enrichment_development_v019=CL:0000790;4.89e-33;18!CL:0000051;4.85e-12;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.84e-10!102;UBERON:0003061!2.84e-10!102;UBERON:0002193!3.44e-09!112;UBERON:0007023!1.51e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.43e-12;15!UBERON:0000179;1.43e-12;15!UBERON:0000463;1.43e-12;15!UBERON:0002390;9.33e-08;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.38e-12,15;UBERON:0000179,1.38e-12,15;UBERON:0000463,1.38e-12,15 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0.331397375727916,0,0,0,0.487932798790507,0,0,0,0,0,0,0.382067028739756,0.0821005894499457,0.236132343941038,0,0,0.154816123316076,0,0.6024118375565,0.369754010166788,0.387336002901508,0,0.293600439334847,2.21598163412751,2.00544447470142,1.08505435357926,0.223915474239924,0.32389366601898,0,0,0.377875943688809,0.242584061187816,0,0.411167888021826,0.309706370895104,0.575384784644301,0.256160706529101,0,0.689491361473237,1.29096936716765,0,0,0,0,0,0.320929027076094,0,0,0.199463657621632,0.426224750532694,0.290209238628584,1.13477044938228,0,0.502497330513487,0.521482918420201,0,0,0.736555271975129,0,1.05627643155971,0.850417199860174,0.419317291016752,0.44931452458598,1.20141514273205,0.48217676009124,0.570025487482497,0.39783335439818,0.182664153764634,0,1.09227722252426,0,0.426730222566507,0.400395987036012,0,0,0,0,1.17447437874188,1.14681968437569,1.32171328579026,0,0,10.4256178160332,5.89516144123747,9.04646595597841,3.67810289859492,8.47397893247335,11.8361951433683,13.6378709885538,8.13296335261767,8.24896540929544,8.19675409959398,7.04090045789041,3.71464827204458,2.86130564631732,3.78207180588455,4.97430032014527,4.05724320029073,10.9732056739925,6.68852070224283,7.31748666634838,5.43884844948318,8.04763036564035,8.24705869158312,7.59059076058509,8.60126618675061,8.46408490013344,1.90090408889675,4.9689789295665,5.75939750194883,2.49861453104692,7.57687206540854,1.64225599384209,4.63695509416885,4.27904313253612,4.34473211648397,0,0,0,0,0,0,0,0,0,0,0,0.72038491523742,1.09288586487763,0,0.97364218096405,0.522389211897802,0.797747763113191,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245668634623536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.65921118388786,1.45782745153634,3.02104251460748,1.14027160516907,0.252320850875628,0.36497735907583,0,0,0,0,0,0.828147600278907,1.85443159085912,0,0.55146986366197,1.08939722046203,0.237270619111097,0.404493924480493,0.196221465125346,0.769494313892781,0,0,0,0,0,0,0,0,0.491953754172454,0,0.109750285408626,0,0,0.185176890317059,0,0,0,0,0,0,0,0,0,0,0.246217006087397,0.234004265139238,0.148631162288728,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.502257091432126,0,0,0,0,0,0,0,0.224170287987055,3.15249216323084,1.2937654491571,2.31017465303547,0,1.30139853857622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.78950473144085,2.37285620900479,2.77491650288955,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0.362578348774867,0,0,0,0.182091168006717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192444225451024,0,0,0.0941438007767792,0,0,0,0,2.53723804616085,0.764637207142375,6.26611905891579,4.2881719582402,3.29089818468955,1.29694662238543,5.94034580961926,3.17250070517708,0,0,0,0.557409525377156,0,0,0.956557636372934,0,0,0,0,0,0,0,0,0,0,0,0.425846237690326,0,0,0,0,7.81552381608161,0.278406173895242,0,0,0,0,0.37428108081644,0.146508179271894,0,2.34031106982705,0,0,0,0,0,0.140669416410513,0.333926115068718,2.30725423917463,0.844501632511974,0,0.828851746593443,0,0,0.369254416383208,0,0,0.179021174675609,0,0.197286811273867,0,0,0,0.927680981618513,0,0,0,1.44999915086959,1.70690172428249,0.508507300585533,0.945550727071745,0.344743373241465,2.91604613383254,0,0,0.241192877250816,0,1.10579259931225,0.295547618953547,0.438770794307945,0,0.697118721393016,0.461701551022782,0,0,0.179515288819544,0.217294743844016,0,0,0,0,0.156980256395025,0,0.451191321234361,0.19606253431774,0.167821586975843,0,0,0,0,0.424059214301822,0,0,0.442287822516696,0.611030144933625,0,0,0,0,0,0,0.547364367646998,0.782658475728359,0,1.57833761139756,0,0,0.252746318513952,0,0,0,0,0,0,0.284609546029793,0,0,0.0979923974143777,1.65412492502765,0,0,3.67674058898524,5.99332400106722,3.94154193855404,0.0969890164884194,0,0.225980740780532,0,0,0.253243183823515,0.391102765469606,0,0,0,1.15272333723285,0,0,0,0,0.471388069233591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157566364614447,0.329663433524666,0.404421263125109,0.0984274815147488,0,0,0,0.643012593860077,2.47570985875021,3.32352270423348,0,0,0.182248669974074,0,0.472834243795189,0.524545881349981,0,0,0.191915197319445,0,0,0,0,0,0,0,0.082092520749339,0,0.453248366080503,0.293104467356165,0,0,0,1.02652102730598,1.40963004463334,0.961086713109252,0,0,2.48083010905975,2.37133958277533,0.243585196761792,0,0.544017803369474,0,0,0,0.157054096250234,0,0.122026264901963,0.1251909307065,0,0,0.0620964029413835,0,0,0,0,0,0,0.579684114443301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179088841081487,0,0,0,1.3503982678964,0,0.76872455576384,0,0,0.276516872303462,0,0,0,0,0,0.211312123358627,0,0,9.64403886100568,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0.0788617450012534,0,0,0,0.321146125482298,0,0,0.41023272848151,0,0.553258019713743,0.161475645631851,0,1.86480665151949,0.825788063434183,0,0.346576998451015,0,0,0,0.0752103283492573,0,0,0.261906694481422,0.49131575253029,0.739280431085226,0.202612753855184,0,0.206686796501184,0.443910671357348,0,0.548257766857182,0,0.175871244359621,0.766574565837572,0,0,0,0.91064876540519,0,1.26757386311357,0,0.135939465953663,0.131545547125698,0.354581522651905,0.444925607568277,0.549451649953598,0.157115589916002,0,0,0,0,0.214429632529969,0,0,0.173858272302579,0,0,0,0,2.15113679410139,0,0.0852134047591577,1.27016115057279,0,0,0,0.335566295393377,0.687051635306701,0.365753774946808,0,0,0,0,1.40363678077263,0.795803100645473,0,0.11294608203896,0,1.66059127923341,0.463044948647668,0,1.41095188908457,0,0,0,0,0,0,0.469919589899268,0.322289439867886,0,1.60698544745092,0,0.722172300202514,0,1.83491713361816,0,0,0.135982980381829,0,0.5290268405154,0,0,0,0,0.109265571963696,0.380095503034311,0,0,0,0,0.0757786982182394,0,0,0.20686599172379,0.213233981900981,0,1.0334225573761,1.11734485732544,0,1.52753179867596,0.808468755832877,0.653150243690884,0,2.76143417359809,0.430333232356058,0,0,0,0,0,0,0,0.813792356631477,0.665756774185513,0.603821380773079,0.641136984606466 | |phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0.331397375727916,0,0,0,0.487932798790507,0,0,0,0,0,0,0.382067028739756,0.0821005894499457,0.236132343941038,0,0,0.154816123316076,0,0.6024118375565,0.369754010166788,0.387336002901508,0,0.293600439334847,2.21598163412751,2.00544447470142,1.08505435357926,0.223915474239924,0.32389366601898,0,0,0.377875943688809,0.242584061187816,0,0.411167888021826,0.309706370895104,0.575384784644301,0.256160706529101,0,0.689491361473237,1.29096936716765,0,0,0,0,0,0.320929027076094,0,0,0.199463657621632,0.426224750532694,0.290209238628584,1.13477044938228,0,0.502497330513487,0.521482918420201,0,0,0.736555271975129,0,1.05627643155971,0.850417199860174,0.419317291016752,0.44931452458598,1.20141514273205,0.48217676009124,0.570025487482497,0.39783335439818,0.182664153764634,0,1.09227722252426,0,0.426730222566507,0.400395987036012,0,0,0,0,1.17447437874188,1.14681968437569,1.32171328579026,0,0,10.4256178160332,5.89516144123747,9.04646595597841,3.67810289859492,8.47397893247335,11.8361951433683,13.6378709885538,8.13296335261767,8.24896540929544,8.19675409959398,7.04090045789041,3.71464827204458,2.86130564631732,3.78207180588455,4.97430032014527,4.05724320029073,10.9732056739925,6.68852070224283,7.31748666634838,5.43884844948318,8.04763036564035,8.24705869158312,7.59059076058509,8.60126618675061,8.46408490013344,1.90090408889675,4.9689789295665,5.75939750194883,2.49861453104692,7.57687206540854,1.64225599384209,4.63695509416885,4.27904313253612,4.34473211648397,0,0,0,0,0,0,0,0,0,0,0,0.72038491523742,1.09288586487763,0,0.97364218096405,0.522389211897802,0.797747763113191,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245668634623536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.65921118388786,1.45782745153634,3.02104251460748,1.14027160516907,0.252320850875628,0.36497735907583,0,0,0,0,0,0.828147600278907,1.85443159085912,0,0.55146986366197,1.08939722046203,0.237270619111097,0.404493924480493,0.196221465125346,0.769494313892781,0,0,0,0,0,0,0,0,0.491953754172454,0,0.109750285408626,0,0,0.185176890317059,0,0,0,0,0,0,0,0,0,0,0.246217006087397,0.234004265139238,0.148631162288728,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.502257091432126,0,0,0,0,0,0,0,0.224170287987055,3.15249216323084,1.2937654491571,2.31017465303547,0,1.30139853857622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.78950473144085,2.37285620900479,2.77491650288955,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0.362578348774867,0,0,0,0.182091168006717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192444225451024,0,0,0.0941438007767792,0,0,0,0,2.53723804616085,0.764637207142375,6.26611905891579,4.2881719582402,3.29089818468955,1.29694662238543,5.94034580961926,3.17250070517708,0,0,0,0.557409525377156,0,0,0.956557636372934,0,0,0,0,0,0,0,0,0,0,0,0.425846237690326,0,0,0,0,7.81552381608161,0.278406173895242,0,0,0,0,0.37428108081644,0.146508179271894,0,2.34031106982705,0,0,0,0,0,0.140669416410513,0.333926115068718,2.30725423917463,0.844501632511974,0,0.828851746593443,0,0,0.369254416383208,0,0,0.179021174675609,0,0.197286811273867,0,0,0,0.927680981618513,0,0,0,1.44999915086959,1.70690172428249,0.508507300585533,0.945550727071745,0.344743373241465,2.91604613383254,0,0,0.241192877250816,0,1.10579259931225,0.295547618953547,0.438770794307945,0,0.697118721393016,0.461701551022782,0,0,0.179515288819544,0.217294743844016,0,0,0,0,0.156980256395025,0,0.451191321234361,0.19606253431774,0.167821586975843,0,0,0,0,0.424059214301822,0,0,0.442287822516696,0.611030144933625,0,0,0,0,0,0,0.547364367646998,0.782658475728359,0,1.57833761139756,0,0,0.252746318513952,0,0,0,0,0,0,0.284609546029793,0,0,0.0979923974143777,1.65412492502765,0,0,3.67674058898524,5.99332400106722,3.94154193855404,0.0969890164884194,0,0.225980740780532,0,0,0.253243183823515,0.391102765469606,0,0,0,1.15272333723285,0,0,0,0,0.471388069233591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157566364614447,0.329663433524666,0.404421263125109,0.0984274815147488,0,0,0,0.643012593860077,2.47570985875021,3.32352270423348,0,0,0.182248669974074,0,0.472834243795189,0.524545881349981,0,0,0.191915197319445,0,0,0,0,0,0,0,0.082092520749339,0,0.453248366080503,0.293104467356165,0,0,0,1.02652102730598,1.40963004463334,0.961086713109252,0,0,2.48083010905975,2.37133958277533,0.243585196761792,0,0.544017803369474,0,0,0,0.157054096250234,0,0.122026264901963,0.1251909307065,0,0,0.0620964029413835,0,0,0,0,0,0,0.579684114443301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179088841081487,0,0,0,1.3503982678964,0,0.76872455576384,0,0,0.276516872303462,0,0,0,0,0,0.211312123358627,0,0,9.64403886100568,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0.0788617450012534,0,0,0,0.321146125482298,0,0,0.41023272848151,0,0.553258019713743,0.161475645631851,0,1.86480665151949,0.825788063434183,0,0.346576998451015,0,0,0,0.0752103283492573,0,0,0.261906694481422,0.49131575253029,0.739280431085226,0.202612753855184,0,0.206686796501184,0.443910671357348,0,0.548257766857182,0,0.175871244359621,0.766574565837572,0,0,0,0.91064876540519,0,1.26757386311357,0,0.135939465953663,0.131545547125698,0.354581522651905,0.444925607568277,0.549451649953598,0.157115589916002,0,0,0,0,0.214429632529969,0,0,0.173858272302579,0,0,0,0,2.15113679410139,0,0.0852134047591577,1.27016115057279,0,0,0,0.335566295393377,0.687051635306701,0.365753774946808,0,0,0,0,1.40363678077263,0.795803100645473,0,0.11294608203896,0,1.66059127923341,0.463044948647668,0,1.41095188908457,0,0,0,0,0,0,0.469919589899268,0.322289439867886,0,1.60698544745092,0,0.722172300202514,0,1.83491713361816,0,0,0.135982980381829,0,0.5290268405154,0,0,0,0,0.109265571963696,0.380095503034311,0,0,0,0,0.0757786982182394,0,0,0.20686599172379,0.213233981900981,0,1.0334225573761,1.11734485732544,0,1.52753179867596,0.808468755832877,0.653150243690884,0,2.76143417359809,0.430333232356058,0,0,0,0,0,0,0,0.813792356631477,0.665756774185513,0.603821380773079,0.641136984606466 | ||
|short_description=p4@FBXL16 | |||
}} | }} |
Latest revision as of 20:44, 17 September 2015
Short description: | p4@FBXL16 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_FBXL16_5end |
Coexpression cluster: | C18_CD4_CD8_thymus_Whole_Peripheral_Natural_blood |
Association with transcript: | 52bp_to_uc002cjb.2_5end |
EntrezGene: | FBXL16 |
HGNC: | 14150 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 2.36e-33 | 18 |
alpha-beta T cell | 2.36e-33 | 18 |
immature T cell | 2.36e-33 | 18 |
mature T cell | 2.36e-33 | 18 |
immature alpha-beta T cell | 2.36e-33 | 18 |
T cell | 2.94e-28 | 25 |
pro-T cell | 2.94e-28 | 25 |
lymphoid lineage restricted progenitor cell | 4.71e-23 | 52 |
CD8-positive, alpha-beta T cell | 8.50e-23 | 11 |
lymphocyte | 1.83e-22 | 53 |
common lymphoid progenitor | 1.83e-22 | 53 |
nongranular leukocyte | 1.71e-14 | 115 |
CD4-positive, alpha-beta T cell | 1.85e-14 | 6 |
leukocyte | 8.85e-11 | 136 |
hematopoietic lineage restricted progenitor cell | 1.22e-10 | 120 |
naive T cell | 4.45e-08 | 3 |
hematopoietic stem cell | 1.05e-07 | 168 |
single nucleate cell | 3.57e-07 | 3 |
mononuclear cell | 3.57e-07 | 3 |
hematopoietic cell | 7.10e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
blood | 1.38e-12 | 15 |
haemolymphatic fluid | 1.38e-12 | 15 |
organism substance | 1.38e-12 | 15 |