FFCP PHASE1:Hg19::chr8:135614159..135614170,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57623 | |EntrezGene=57623 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=19899 | |HGNC=19899 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-328bp_to_BC039059_5end | |association_with_transcript=-328bp_to_BC039059_5end | ||
|cluster_id=chr8:135614159..135614170,- | |||
|coexpression_cluster_id=C44 | |||
|description=CAGE_peak_13_at_ZFAT_5end | |description=CAGE_peak_13_at_ZFAT_5end | ||
|id=chr8:135614159..135614170,- | |id=chr8:135614159..135614170,- | ||
|ontology_enrichment_celltype=CL:0000945!2.28e-41!24;CL:0000826!2.28e-41!24;CL:0000838!3.71e-20!52;CL:0000542!1.03e-19!53;CL:0000051!1.03e-19!53;CL:0000784!7.26e-18!3;CL:0000738!9.31e-10!140;CL:0000236!1.25e-09!14;CL:0002087!4.19e-08!119;CL:0002031!1.20e-07!124;CL:0000037!3.30e-07!172;CL:0000566!3.30e-07!172;CL:0000946!6.80e-07!1;CL:0000786!6.80e-07!1;CL:0000980!6.80e-07!1 | |ontology_enrichment_celltype=CL:0000945!2.28e-41!24;CL:0000826!2.28e-41!24;CL:0000838!3.71e-20!52;CL:0000542!1.03e-19!53;CL:0000051!1.03e-19!53;CL:0000784!7.26e-18!3;CL:0000738!9.31e-10!140;CL:0000236!1.25e-09!14;CL:0002087!4.19e-08!119;CL:0002031!1.20e-07!124;CL:0000037!3.30e-07!172;CL:0000566!3.30e-07!172;CL:0000946!6.80e-07!1;CL:0000786!6.80e-07!1;CL:0000980!6.80e-07!1 | ||
|ontology_enrichment_celltype_v019=CL:0000784;6.07e-75;3!CL:0000451;4.06e-21;10!CL:0000945;8.23e-17;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000784,6.07e-75,3;CL:0000451,4.06e-21,10;CL:0000945,8.23e-17,24;CL:0000826,8.23e-17,24;CL:0000738,7.34e-09,136;CL:0000838,5.38e-08,52;CL:0000542,7.49e-08,53;CL:0000051,7.49e-08,53;CL:0000037,3.66e-07,168;CL:0000988,8.58e-07,177 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0060058!9.32e-09!10;DOID:630!7.60e-07!1;DOID:0050177!7.60e-07!1;DOID:0050427!7.60e-07!1 | |ontology_enrichment_disease=DOID:0060058!9.32e-09!10;DOID:630!7.60e-07!1;DOID:0050177!7.60e-07!1;DOID:0050427!7.60e-07!1 | ||
|ontology_enrichment_disease_v019=DOID:0060058;6.77e-11;10 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,7.30e-11,10 | |||
|ontology_enrichment_uberon=UBERON:0004177!4.28e-12!7;UBERON:0002106!4.10e-08!3;UBERON:0004854!4.10e-08!3;UBERON:0009034!4.10e-08!3;UBERON:0002095!4.10e-08!3;UBERON:0004782!4.10e-08!3;UBERON:0003281!4.10e-08!3;UBERON:0009664!4.10e-08!3;UBERON:0002296!4.10e-08!3;UBERON:0005602!4.10e-08!3;UBERON:0001179!4.10e-08!3;UBERON:0006293!4.10e-08!3 | |ontology_enrichment_uberon=UBERON:0004177!4.28e-12!7;UBERON:0002106!4.10e-08!3;UBERON:0004854!4.10e-08!3;UBERON:0009034!4.10e-08!3;UBERON:0002095!4.10e-08!3;UBERON:0004782!4.10e-08!3;UBERON:0003281!4.10e-08!3;UBERON:0009664!4.10e-08!3;UBERON:0002296!4.10e-08!3;UBERON:0005602!4.10e-08!3;UBERON:0001179!4.10e-08!3;UBERON:0006293!4.10e-08!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0002106;1.19e-09;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,1.19e-09,3;UBERON:0004854,1.19e-09,3;UBERON:0009034,1.19e-09,3;UBERON:0002095,1.19e-09,3;UBERON:0004782,1.19e-09,3;UBERON:0003281,1.19e-09,3;UBERON:0009664,1.19e-09,3;UBERON:0002296,1.19e-09,3;UBERON:0005602,1.19e-09,3;UBERON:0001179,1.19e-09,3;UBERON:0006293,1.19e-09,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.45185470921107,1.80621296789881,1.96776953284198,0,0.767658796194425,0,0,0,0,0,0.142169232487422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426730222566507,0,0.574752439954483,0,0.954053754535364,0,0.587237189370939,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,7.87019060207628,16.5878524126237,2.97166001063652,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285955987316295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.328014645699706,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0.569647187174163,0,0,0,0,0,0,0,0.245040215981032,0,0,0.213425530045242,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246169610922139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846733320657845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0,0,0,0,0.197611631897944,1.21792598380896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.344429959321631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159633859057151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227662191351298,0,0.921871900446234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0939839179798536,0,3.19811698959773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0645889098360061,0.124149428591716,0,0,0,0,0,0.404112318087525,0.143444410785353,0,0,0,0,0,0,0,0,0,0,0.641136984606466 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.45185470921107,1.80621296789881,1.96776953284198,0,0.767658796194425,0,0,0,0,0,0.142169232487422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426730222566507,0,0.574752439954483,0,0.954053754535364,0,0.587237189370939,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,7.87019060207628,16.5878524126237,2.97166001063652,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285955987316295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.328014645699706,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0.569647187174163,0,0,0,0,0,0,0,0.245040215981032,0,0,0.213425530045242,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246169610922139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846733320657845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0,0,0,0,0.197611631897944,1.21792598380896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.344429959321631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159633859057151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227662191351298,0,0.921871900446234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0939839179798536,0,3.19811698959773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0645889098360061,0.124149428591716,0,0,0,0,0,0.404112318087525,0.143444410785353,0,0,0,0,0,0,0,0,0,0,0.641136984606466 | ||
|short_description=p13@ZFAT | |short_description=p13@ZFAT | ||
}} | }} |
Latest revision as of 17:54, 16 September 2015
Short description: | p13@ZFAT |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_ZFAT_5end |
Coexpression cluster: | C44_Dendritic_CD19_CD133_granulocyte_acute_thymus_immature |
Association with transcript: | -328bp_to_BC039059_5end |
EntrezGene: | ZFAT |
HGNC: | 19899 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
plasmacytoid dendritic cell | 6.07e-75 | 3 |
dendritic cell | 4.06e-21 | 10 |
lymphocyte of B lineage | 8.23e-17 | 24 |
pro-B cell | 8.23e-17 | 24 |
leukocyte | 7.34e-09 | 136 |
lymphoid lineage restricted progenitor cell | 5.38e-08 | 52 |
lymphocyte | 7.49e-08 | 53 |
common lymphoid progenitor | 7.49e-08 | 53 |
hematopoietic stem cell | 3.66e-07 | 168 |
hematopoietic cell | 8.58e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
spleen | 1.19e-09 | 3 |
gastrointestinal system mesentery | 1.19e-09 | 3 |
stomach region | 1.19e-09 | 3 |
mesentery | 1.19e-09 | 3 |
gastrointestinal system serosa | 1.19e-09 | 3 |
mesentery of stomach | 1.19e-09 | 3 |
gut mesentery | 1.19e-09 | 3 |
dorsal mesentery | 1.19e-09 | 3 |
dorsal mesogastrium | 1.19e-09 | 3 |
peritoneal cavity | 1.19e-09 | 3 |
spleen primordium | 1.19e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 7.30e-11 | 10 |