FFCP PHASE1:Hg19::chr8:126010973..126010985,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6713 | |EntrezGene=6713 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11279 | |HGNC=11279 | ||
|TSSclassifier=strong | |||
|UniProt=Q14534 | |UniProt=Q14534 | ||
|association_with_transcript=225bp_to_ENST00000265896_5end | |association_with_transcript=225bp_to_ENST00000265896_5end | ||
|cluster_id=chr8:126010973..126010985,+ | |||
|coexpression_cluster_id=C2881 | |||
|description=CAGE_peak_4_at_SQLE_5end | |description=CAGE_peak_4_at_SQLE_5end | ||
|id=chr8:126010973..126010985,+ | |id=chr8:126010973..126010985,+ | ||
|ontology_enrichment_celltype=CL:0000988!2.06e-14!182;CL:0002032!2.49e-13!165;CL:0000837!2.49e-13!165;CL:0000037!6.41e-13!172;CL:0000566!6.41e-13!172;CL:0000738!6.00e-11!140;CL:0002371!2.27e-10!591;CL:0000144!6.10e-10!625;CL:0000763!1.21e-09!112;CL:0000049!1.21e-09!112;CL:0000723!3.93e-09!436;CL:0000048!4.29e-09!430;CL:0000034!5.78e-09!444;CL:0000012!1.02e-08!682;CL:0000548!1.65e-08!679;CL:0000004!1.65e-08!679;CL:0000255!1.65e-08!679;CL:0002031!3.09e-08!124;CL:0002087!2.23e-07!119;CL:0000990!2.24e-07!8;CL:0000134!5.23e-07!358 | |ontology_enrichment_celltype=CL:0000988!2.06e-14!182;CL:0002032!2.49e-13!165;CL:0000837!2.49e-13!165;CL:0000037!6.41e-13!172;CL:0000566!6.41e-13!172;CL:0000738!6.00e-11!140;CL:0002371!2.27e-10!591;CL:0000144!6.10e-10!625;CL:0000763!1.21e-09!112;CL:0000049!1.21e-09!112;CL:0000723!3.93e-09!436;CL:0000048!4.29e-09!430;CL:0000034!5.78e-09!444;CL:0000012!1.02e-08!682;CL:0000548!1.65e-08!679;CL:0000004!1.65e-08!679;CL:0000255!1.65e-08!679;CL:0002031!3.09e-08!124;CL:0002087!2.23e-07!119;CL:0000990!2.24e-07!8;CL:0000134!5.23e-07!358 | ||
|ontology_enrichment_celltype_v019=CL:0000453;2.70e-24;5!CL:0000990;1.29e-18;8!CL:0000451;4.11e-15;10!CL:0001014;9.75e-11;2!CL:0001016;9.75e-11;2!CL:0002600;1.19e-09;2!CL:0000840;1.46e-07;5!CL:0002393;1.64e-07;6!CL:0002397;1.64e-07;6!CL:0000542;6.40e-07;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000453,2.79e-24,5;CL:0000988,3.97e-22,177;CL:0000037,1.03e-18,168;CL:0000990,1.47e-18,8;CL:0002032,2.36e-18,161;CL:0000837,2.36e-18,161;CL:0000738,9.86e-18,136;CL:0000451,4.55e-15,10;CL:0002031,8.74e-13,120;CL:0001014,1.00e-10,2;CL:0001016,1.00e-10,2;CL:0002087,1.36e-10,115;CL:0002600,4.42e-10,2;CL:0000838,1.10e-09,52;CL:0000763,1.46e-09,108;CL:0000049,1.46e-09,108;CL:0000542,1.86e-09,53;CL:0000051,1.86e-09,53;CL:0000840,1.60e-07,5;CL:0001029,1.60e-07,5;CL:0000134,3.03e-07,354;CL:0002320,5.76e-07,361;CL:0000034,9.78e-07,441 | |||
|ontology_enrichment_development_v019=CL:0000051;6.40e-07;53 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.487932798790507,0,0,0,0,0.136874425072884,0.125542639594803,1.45185470921107,0.821005894499457,1.33808328233255,0.393364276848904,0.383829398097213,0.619264493264304,0.919421224478927,0,0.369754010166788,0,0.142169232487422,0,2.76997704265939,2.4065333696417,2.17010870715852,0,0,0,0,0,0,0.232429036905685,0.822335776043652,0.619412741790207,0.28769239232215,0,0,0,0,0,0,0,0.224723484445085,1.22433556948361,0.320929027076094,0,0,0,0.426224750532694,0.290209238628584,0,0.622822248995575,0.251248665256743,0.521482918420201,0.217188844705117,0,0,0.949387162322653,0.211255286311942,0.212604299965044,0,0.22465726229299,0,0.16072558669708,0.285012743741249,0,0,0,0,0,0,0,0,0,0,1.1384259382189,0,0.382273228125229,0,2.24203425192614,0,0,0,0.205601498999509,0,0.32592226663359,0,0,0,0.294605907474837,0,0,0,0,0.164437904603676,0.276350017785848,0,0,0,0,0,0,0.34362744548263,0,0,0,0,0,0,0,0,0,1.00803371612366,1.33720097891754,0.579297615531196,0,0.670700859703636,0.511450247374121,0,0,0,0,0,0.378139268656271,0.443458794925128,0.263504357079378,0,0.364295288292542,0,0,0.522389211897802,1.19662164466979,0.476981248610684,0,0,0.198762407366705,0,0,0,0,0,0,0,0,0.33472061276467,0.402829317109147,0,0,0.367663080345869,0,0,0,0,0,0,0,1.31780417436063,0,0.436094052142534,0,0.12663051166458,0,1.14734648299525,0.354668382198357,0,0,0.24666754841716,0.622422070799533,0,0.653847612453835,0.302714855289863,0,0,0,0.570471821544449,0.149448680551801,0.117434498643765,0.323745888736263,0,0,0.122834317311768,0,0,0,0,0,0.168336113954066,0,0,0,0,0,0.226864366320042,0.179389635688862,0,0,0,0,0,0,0.168776332241266,0,0,0,0,0,0,0,0.193260853163297,0.272746120590835,0.286804595389004,0,0.132529768321485,0,0,0,0.36497735907583,0,0,0,0,0,0.118306800039844,0.168584690078102,0,0,0.217879444092406,0.237270619111097,0.269662616320329,0,0,0,0,0.4115740113314,0,0,0,0,0,0,0,0.219500570817251,0,0,0.462942225792648,0,0,0,0,0.234817388471643,0.144366447761074,0,0,0,0,0,2.80805118167085,0.594524649154913,0,0.335964256397719,0.141775097242386,0.0895585227028483,0,0,10.8385912337108,0.44024217006613,0,0.432359860250884,0.25248486685276,0,0,0,0,0,0,0,0.112131084345361,0,0.1466765716419,0.517086863031111,0,0,0.26593811658487,0,0,0,0,0.285955987316295,0,0.823240336780769,0,0,0,0.602878754119172,0,0.899756920638513,0,0,2.10833939483032,0.239624855491583,0,0,0,0,0,0.224170287987055,0.591092280605782,1.2937654491571,1.15508732651774,0,0,0,0,0.637938751653163,0,0,0,0,0.500170521059677,0,0.207970861530807,0.178428988797162,0,0,0,0,1.03473071292505,0,0,0.0868836144680828,0,0,0,1.07857100409308,0.213455115606889,0,0,0,0.248107807818777,0.153461973288062,0,0,0.511707249066704,0,0,0,0,0.0821271560138091,0,0,0,0.40101294060657,0,0,0,0.131124414959424,0,0.231046011313244,0,1.46139224653261,0.316654886678627,0,0.170093705276516,0,0,0.270946437543853,0,0,0,0,0,0,0,0.328014645699706,0,0,0.366277859273374,0.082509499920588,0,0,0,0,0.308097234229289,0.15350367472613,0.551346289938122,0.107420244868274,0.290033387828457,0.0852266274161009,1.15741646340759,0,0.192190067365106,0.893288987462089,0.10115778085555,0,0,0,0.616067160352178,0,0,0.18532421910392,0.286249773483982,0.372158369359667,0,0.38126038784765,0,0.42793898803392,0,0,0,0,0.235624804691373,0,0,0,0.975267478179181,0,0,0,0.141405431953713,0,0,0,0,1.73632660280006,1.9676842561399,0,0.30982349809975,0,0.286822704408103,0.392996164052485,0,0.354761064070598,0,0,0,0,0.0962221127255121,0.670302275535787,0,0.0941438007767792,0,0,0.443430153536676,0.689170200620878,0,0,0,0,0,0,0,0,0,0,0,0.557409525377156,0,0.0711418433484141,0,1.39705560002972,0,0.635020748171649,0,0.561594356226918,0,0,0,0,0,0,0,0,0,0,0,0.390776190804081,0.835218521685727,0,3.2454681417118,0.33307196799782,0,0.18714054040822,0.146508179271894,0.242721043499027,0.111443384277478,0,0.23874448473769,0,0,0,0,0,0,0,0,0,0,0.102268682502155,1.35393286007176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173624994933292,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.627921025580099,1.66211681900156,0.902382642468723,0.784250137270958,2.3495022176618,0,0.476809736941136,0,0,0,0,0,0,0,8.00607047437679,11.8621381388643,10.4421949505455,0.067401132980677,0,0,0,0,0.242780379534093,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0.391969589657511,0.174118413160805,0,0,0,0.0730893170861856,0.0821154570532092,0,0,0,0,0,0.126621591911757,0,0.64127056201227,0,0,0,0.343609788497747,0,0,0,0,0,0,0,0,0,0,0,0,2.10309883423452,0,0,0,0,0,0,0,0,0,0.157566364614447,0.164831716762333,0.13480708770837,0,0.0846733320657845,0,0,0.321506296930038,0.137539436597234,0,22.2724152635985,3.0952078182318,0.121499113316049,0,0,0,0,0,0,0,0,0,0,0,0,0,0.903017728242729,0,0,0.146552233678082,1.32506888912221,0,0,0,0,0.106787412567695,0,0,0,0,4.14094834495046,0,0,0,0,0,0,0,0,0.1251909307065,0,0,0.0620964029413835,0,0,0,0,0.235265819698172,0,0,0.149254802886874,0.467426619694449,0,0.378806010550178,0,0,0.228840068396924,0.302461847526478,0.310874401165561,0.147855149989634,0,0,0,0,0.53168342911599,0,0,0.761610424337591,0,0.363697318405119,0.429642228169954,0,0,0,0.343395705182793,0,0,0,1.71553273099941,0.260994291965212,0,0,0,0.179088841081487,0,0,0,0.38582807654183,0,0,0.345430341731199,0,0,9.74301544196942,15.4123214763501,9.15966207832728,0,0,0,4.19973531295353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,0,0.0642292250964595,0,0,0,0,0.138314504928436,0,0,0.0981477185010256,0,0.183428598521679,0.115525666150338,0,0,2.58591088751157,0.0752103283492573,0.20170506870352,0,0,0.163771917510097,0,0,0,0,0,0,0,0,0.175871244359621,0,0,0,0,0,0,1.15233987555779,0.342976018874837,0.0679697329768317,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207216164163037,0.17071847709395,0,0,0,0.0852134047591577,0,0.4582137370881,0,0,0,0,0.121917924982269,0,0,0,0.485710993059139,0,0,0,0,0,0,0.0771741581079447,0.218559560503957,0,0,0,0.392616934229891,0,0,0,0,0,0.999411559249289,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0.126166424835079,0.109265571963696,0.253397002022874,0,0,0,0,0.0757786982182394,0.267964130156178,0,0,0,0,0.193766729508018,0.248298857183432,0,0,0,0,0.342233301085281,0.26940821205835,0,0,0,0,0,0,0,0,1.22068853494722,0,0,0.320568492303233 | |phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.487932798790507,0,0,0,0,0.136874425072884,0.125542639594803,1.45185470921107,0.821005894499457,1.33808328233255,0.393364276848904,0.383829398097213,0.619264493264304,0.919421224478927,0,0.369754010166788,0,0.142169232487422,0,2.76997704265939,2.4065333696417,2.17010870715852,0,0,0,0,0,0,0.232429036905685,0.822335776043652,0.619412741790207,0.28769239232215,0,0,0,0,0,0,0,0.224723484445085,1.22433556948361,0.320929027076094,0,0,0,0.426224750532694,0.290209238628584,0,0.622822248995575,0.251248665256743,0.521482918420201,0.217188844705117,0,0,0.949387162322653,0.211255286311942,0.212604299965044,0,0.22465726229299,0,0.16072558669708,0.285012743741249,0,0,0,0,0,0,0,0,0,0,1.1384259382189,0,0.382273228125229,0,2.24203425192614,0,0,0,0.205601498999509,0,0.32592226663359,0,0,0,0.294605907474837,0,0,0,0,0.164437904603676,0.276350017785848,0,0,0,0,0,0,0.34362744548263,0,0,0,0,0,0,0,0,0,1.00803371612366,1.33720097891754,0.579297615531196,0,0.670700859703636,0.511450247374121,0,0,0,0,0,0.378139268656271,0.443458794925128,0.263504357079378,0,0.364295288292542,0,0,0.522389211897802,1.19662164466979,0.476981248610684,0,0,0.198762407366705,0,0,0,0,0,0,0,0,0.33472061276467,0.402829317109147,0,0,0.367663080345869,0,0,0,0,0,0,0,1.31780417436063,0,0.436094052142534,0,0.12663051166458,0,1.14734648299525,0.354668382198357,0,0,0.24666754841716,0.622422070799533,0,0.653847612453835,0.302714855289863,0,0,0,0.570471821544449,0.149448680551801,0.117434498643765,0.323745888736263,0,0,0.122834317311768,0,0,0,0,0,0.168336113954066,0,0,0,0,0,0.226864366320042,0.179389635688862,0,0,0,0,0,0,0.168776332241266,0,0,0,0,0,0,0,0.193260853163297,0.272746120590835,0.286804595389004,0,0.132529768321485,0,0,0,0.36497735907583,0,0,0,0,0,0.118306800039844,0.168584690078102,0,0,0.217879444092406,0.237270619111097,0.269662616320329,0,0,0,0,0.4115740113314,0,0,0,0,0,0,0,0.219500570817251,0,0,0.462942225792648,0,0,0,0,0.234817388471643,0.144366447761074,0,0,0,0,0,2.80805118167085,0.594524649154913,0,0.335964256397719,0.141775097242386,0.0895585227028483,0,0,10.8385912337108,0.44024217006613,0,0.432359860250884,0.25248486685276,0,0,0,0,0,0,0,0.112131084345361,0,0.1466765716419,0.517086863031111,0,0,0.26593811658487,0,0,0,0,0.285955987316295,0,0.823240336780769,0,0,0,0.602878754119172,0,0.899756920638513,0,0,2.10833939483032,0.239624855491583,0,0,0,0,0,0.224170287987055,0.591092280605782,1.2937654491571,1.15508732651774,0,0,0,0,0.637938751653163,0,0,0,0,0.500170521059677,0,0.207970861530807,0.178428988797162,0,0,0,0,1.03473071292505,0,0,0.0868836144680828,0,0,0,1.07857100409308,0.213455115606889,0,0,0,0.248107807818777,0.153461973288062,0,0,0.511707249066704,0,0,0,0,0.0821271560138091,0,0,0,0.40101294060657,0,0,0,0.131124414959424,0,0.231046011313244,0,1.46139224653261,0.316654886678627,0,0.170093705276516,0,0,0.270946437543853,0,0,0,0,0,0,0,0.328014645699706,0,0,0.366277859273374,0.082509499920588,0,0,0,0,0.308097234229289,0.15350367472613,0.551346289938122,0.107420244868274,0.290033387828457,0.0852266274161009,1.15741646340759,0,0.192190067365106,0.893288987462089,0.10115778085555,0,0,0,0.616067160352178,0,0,0.18532421910392,0.286249773483982,0.372158369359667,0,0.38126038784765,0,0.42793898803392,0,0,0,0,0.235624804691373,0,0,0,0.975267478179181,0,0,0,0.141405431953713,0,0,0,0,1.73632660280006,1.9676842561399,0,0.30982349809975,0,0.286822704408103,0.392996164052485,0,0.354761064070598,0,0,0,0,0.0962221127255121,0.670302275535787,0,0.0941438007767792,0,0,0.443430153536676,0.689170200620878,0,0,0,0,0,0,0,0,0,0,0,0.557409525377156,0,0.0711418433484141,0,1.39705560002972,0,0.635020748171649,0,0.561594356226918,0,0,0,0,0,0,0,0,0,0,0,0.390776190804081,0.835218521685727,0,3.2454681417118,0.33307196799782,0,0.18714054040822,0.146508179271894,0.242721043499027,0.111443384277478,0,0.23874448473769,0,0,0,0,0,0,0,0,0,0,0.102268682502155,1.35393286007176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173624994933292,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.627921025580099,1.66211681900156,0.902382642468723,0.784250137270958,2.3495022176618,0,0.476809736941136,0,0,0,0,0,0,0,8.00607047437679,11.8621381388643,10.4421949505455,0.067401132980677,0,0,0,0,0.242780379534093,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0.391969589657511,0.174118413160805,0,0,0,0.0730893170861856,0.0821154570532092,0,0,0,0,0,0.126621591911757,0,0.64127056201227,0,0,0,0.343609788497747,0,0,0,0,0,0,0,0,0,0,0,0,2.10309883423452,0,0,0,0,0,0,0,0,0,0.157566364614447,0.164831716762333,0.13480708770837,0,0.0846733320657845,0,0,0.321506296930038,0.137539436597234,0,22.2724152635985,3.0952078182318,0.121499113316049,0,0,0,0,0,0,0,0,0,0,0,0,0,0.903017728242729,0,0,0.146552233678082,1.32506888912221,0,0,0,0,0.106787412567695,0,0,0,0,4.14094834495046,0,0,0,0,0,0,0,0,0.1251909307065,0,0,0.0620964029413835,0,0,0,0,0.235265819698172,0,0,0.149254802886874,0.467426619694449,0,0.378806010550178,0,0,0.228840068396924,0.302461847526478,0.310874401165561,0.147855149989634,0,0,0,0,0.53168342911599,0,0,0.761610424337591,0,0.363697318405119,0.429642228169954,0,0,0,0.343395705182793,0,0,0,1.71553273099941,0.260994291965212,0,0,0,0.179088841081487,0,0,0,0.38582807654183,0,0,0.345430341731199,0,0,9.74301544196942,15.4123214763501,9.15966207832728,0,0,0,4.19973531295353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,0,0.0642292250964595,0,0,0,0,0.138314504928436,0,0,0.0981477185010256,0,0.183428598521679,0.115525666150338,0,0,2.58591088751157,0.0752103283492573,0.20170506870352,0,0,0.163771917510097,0,0,0,0,0,0,0,0,0.175871244359621,0,0,0,0,0,0,1.15233987555779,0.342976018874837,0.0679697329768317,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207216164163037,0.17071847709395,0,0,0,0.0852134047591577,0,0.4582137370881,0,0,0,0,0.121917924982269,0,0,0,0.485710993059139,0,0,0,0,0,0,0.0771741581079447,0.218559560503957,0,0,0,0.392616934229891,0,0,0,0,0,0.999411559249289,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0.126166424835079,0.109265571963696,0.253397002022874,0,0,0,0,0.0757786982182394,0.267964130156178,0,0,0,0,0.193766729508018,0.248298857183432,0,0,0,0,0.342233301085281,0.26940821205835,0,0,0,0,0,0,0,0,1.22068853494722,0,0,0.320568492303233 | ||
|short_description=p4@SQLE | |short_description=p4@SQLE | ||
}} | }} |
Latest revision as of 02:37, 16 September 2015
Short description: | p4@SQLE |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_SQLE_5end |
Coexpression cluster: | C2881_immature_migratory_cord_Mast_mycosis_Smooth_acute |
Association with transcript: | 225bp_to_ENST00000265896_5end |
EntrezGene: | SQLE |
HGNC: | 11279 |
UniProt: | Q14534 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Langerhans cell | 2.79e-24 | 5 |
hematopoietic cell | 3.97e-22 | 177 |
hematopoietic stem cell | 1.03e-18 | 168 |
conventional dendritic cell | 1.47e-18 | 8 |
hematopoietic oligopotent progenitor cell | 2.36e-18 | 161 |
hematopoietic multipotent progenitor cell | 2.36e-18 | 161 |
leukocyte | 9.86e-18 | 136 |
dendritic cell | 4.55e-15 | 10 |
hematopoietic lineage restricted progenitor cell | 8.74e-13 | 120 |
CD1a-positive Langerhans cell | 1.00e-10 | 2 |
immature CD1a-positive Langerhans cell | 1.00e-10 | 2 |
nongranular leukocyte | 1.36e-10 | 115 |
smooth muscle cell of trachea | 4.42e-10 | 2 |
lymphoid lineage restricted progenitor cell | 1.10e-09 | 52 |
myeloid cell | 1.46e-09 | 108 |
common myeloid progenitor | 1.46e-09 | 108 |
lymphocyte | 1.86e-09 | 53 |
common lymphoid progenitor | 1.86e-09 | 53 |
immature conventional dendritic cell | 1.60e-07 | 5 |
common dendritic progenitor | 1.60e-07 | 5 |
mesenchymal cell | 3.03e-07 | 354 |
connective tissue cell | 5.76e-07 | 361 |
stem cell | 9.78e-07 | 441 |