FFCP PHASE1:Hg19::chr8:11705180..11705213,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr8:11705180..11705213,+ | |||
|coexpression_cluster_id=C632 | |||
|description=CAGE_peak_at_chr8:11705180..11705213,+ | |description=CAGE_peak_at_chr8:11705180..11705213,+ | ||
|id=chr8:11705180..11705213,+ | |id=chr8:11705180..11705213,+ | ||
|ontology_enrichment_celltype=CL:0002371!5.37e-12!591;CL:0000144!7.89e-12!625;CL:0000222!3.23e-10!119;CL:0000055!3.58e-10!180;CL:0002194!4.35e-08!63;CL:0000576!4.35e-08!63;CL:0000040!4.35e-08!63;CL:0000559!4.35e-08!63;CL:0000680!1.41e-07!57;CL:0000056!1.41e-07!57;CL:0000355!1.41e-07!57;CL:0000220!2.36e-07!246;CL:0000183!2.88e-07!59;CL:0002009!3.09e-07!65;CL:0002321!4.53e-07!248;CL:0000057!4.99e-07!75;CL:0000187!8.25e-07!54 | |ontology_enrichment_celltype=CL:0002371!5.37e-12!591;CL:0000144!7.89e-12!625;CL:0000222!3.23e-10!119;CL:0000055!3.58e-10!180;CL:0002194!4.35e-08!63;CL:0000576!4.35e-08!63;CL:0000040!4.35e-08!63;CL:0000559!4.35e-08!63;CL:0000680!1.41e-07!57;CL:0000056!1.41e-07!57;CL:0000355!1.41e-07!57;CL:0000220!2.36e-07!246;CL:0000183!2.88e-07!59;CL:0002009!3.09e-07!65;CL:0002321!4.53e-07!248;CL:0000057!4.99e-07!75;CL:0000187!8.25e-07!54 | ||
|ontology_enrichment_celltype_v019=CL:0000235;1.19e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000048,4.20e-10,427;CL:0000723,5.59e-10,433;CL:0000034,3.59e-09,441;CL:0000235,1.31e-08,6;CL:0002194,1.03e-07,59;CL:0000576,1.03e-07,59;CL:0000040,1.03e-07,59;CL:0000559,1.03e-07,59;CL:0002009,3.40e-07,61 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!8.54e-14!659;UBERON:0000467!1.46e-12!625;UBERON:0000480!1.58e-12!626;UBERON:0002204!7.71e-12!167;UBERON:0000926!8.70e-11!448;UBERON:0004120!8.70e-11!448;UBERON:0006603!8.70e-11!448;UBERON:0003081!4.58e-10!216;UBERON:0000923!8.01e-09!604;UBERON:0005291!8.01e-09!604;UBERON:0006598!8.01e-09!604;UBERON:0002532!8.01e-09!604;UBERON:0002050!1.25e-08!605;UBERON:0005423!1.25e-08!605;UBERON:0000490!1.47e-08!138;UBERON:0000922!3.42e-08!612;UBERON:0000486!3.97e-08!82;UBERON:0004872!1.32e-07!84;UBERON:0004535!2.45e-07!110;UBERON:0000914!6.02e-07!83;UBERON:0002329!6.02e-07!83;UBERON:0003077!6.02e-07!83;UBERON:0003059!6.02e-07!83;UBERON:0007282!6.02e-07!83;UBERON:0009618!6.02e-07!83;UBERON:0007285!6.02e-07!83;UBERON:0001009!8.63e-07!113 | |ontology_enrichment_uberon=UBERON:0000468!8.54e-14!659;UBERON:0000467!1.46e-12!625;UBERON:0000480!1.58e-12!626;UBERON:0002204!7.71e-12!167;UBERON:0000926!8.70e-11!448;UBERON:0004120!8.70e-11!448;UBERON:0006603!8.70e-11!448;UBERON:0003081!4.58e-10!216;UBERON:0000923!8.01e-09!604;UBERON:0005291!8.01e-09!604;UBERON:0006598!8.01e-09!604;UBERON:0002532!8.01e-09!604;UBERON:0002050!1.25e-08!605;UBERON:0005423!1.25e-08!605;UBERON:0000490!1.47e-08!138;UBERON:0000922!3.42e-08!612;UBERON:0000486!3.97e-08!82;UBERON:0004872!1.32e-07!84;UBERON:0004535!2.45e-07!110;UBERON:0000914!6.02e-07!83;UBERON:0002329!6.02e-07!83;UBERON:0003077!6.02e-07!83;UBERON:0003059!6.02e-07!83;UBERON:0007282!6.02e-07!83;UBERON:0009618!6.02e-07!83;UBERON:0007285!6.02e-07!83;UBERON:0001009!8.63e-07!113 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000926,3.99e-13,315;UBERON:0004120,3.99e-13,315;UBERON:0006603,3.99e-13,315;UBERON:0002204,7.89e-12,167;UBERON:0003081,8.22e-10,203;UBERON:0001434,1.21e-07,100;UBERON:0004765,4.73e-07,90;UBERON:0004872,7.81e-07,83 | |||
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| ||
|short_description=p@chr8:11705180..11705213,+ | |short_description=p@chr8:11705180..11705213,+ | ||
}} | }} |
Latest revision as of 14:14, 31 July 2015
Short description: | p@chr8:11705180..11705213, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr8:11705180..11705213, + |
Coexpression cluster: | C632_Monocytederived_Macrophage_Dendritic_CD14_Keratinocyte_basal_tenocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi fate stem cell | 4.20e-10 | 427 |
somatic stem cell | 5.59e-10 | 433 |
stem cell | 3.59e-09 | 441 |
macrophage | 1.31e-08 | 6 |
monopoietic cell | 1.03e-07 | 59 |
monocyte | 1.03e-07 | 59 |
monoblast | 1.03e-07 | 59 |
promonocyte | 1.03e-07 | 59 |
macrophage dendritic cell progenitor | 3.40e-07 | 61 |
Ontology term | p-value | n |
---|---|---|
mesoderm | 3.99e-13 | 315 |
mesoderm-derived structure | 3.99e-13 | 315 |
presumptive mesoderm | 3.99e-13 | 315 |
musculoskeletal system | 7.89e-12 | 167 |
lateral plate mesoderm | 8.22e-10 | 203 |
skeletal system | 1.21e-07 | 100 |
skeletal element | 4.73e-07 | 90 |
splanchnic layer of lateral plate mesoderm | 7.81e-07 | 83 |