FFCP PHASE1:Hg19::chr8:102344320..102344363,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr8:102344320..102344363,- | |||
|coexpression_cluster_id=C770 | |||
|description=CAGE_peak_at_chr8:102344320..102344363,- | |description=CAGE_peak_at_chr8:102344320..102344363,- | ||
|id=chr8:102344320..102344363,- | |id=chr8:102344320..102344363,- | ||
|ontology_enrichment_celltype=CL:0002541!7.22e-27!3;CL:0002620!3.47e-13!23;CL:0002622!2.83e-12!3;CL:0002537!3.24e-08!5 | |ontology_enrichment_celltype=CL:0002541!7.22e-27!3;CL:0002620!3.47e-13!23;CL:0002622!2.83e-12!3;CL:0002537!3.24e-08!5 | ||
|ontology_enrichment_celltype_v019=CL:0002537;1.23e-32;5!CL:1000487;3.81e-21;2!CL:0000349;1.48e-19;19!CL:0002541;1.83e-14;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002537,1.23e-32,5;CL:1000487,3.81e-21,2;CL:0000349,1.48e-19,19;CL:0002541,1.83e-14,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:4960!9.82e-10!1;DOID:0070004!9.82e-10!1;DOID:17!5.31e-08!5;DOID:450!5.31e-08!5;DOID:66!5.31e-08!5;DOID:423!5.31e-08!5;DOID:0080000!5.31e-08!5;DOID:11722!5.31e-08!5 | |ontology_enrichment_disease=DOID:4960!9.82e-10!1;DOID:0070004!9.82e-10!1;DOID:17!5.31e-08!5;DOID:450!5.31e-08!5;DOID:66!5.31e-08!5;DOID:423!5.31e-08!5;DOID:0080000!5.31e-08!5;DOID:11722!5.31e-08!5 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000476!7.22e-27!3;UBERON:0000920!7.22e-27!3;UBERON:0005631!2.85e-22!14;UBERON:0000158!2.85e-22!14;UBERON:0003124!3.78e-20!7;UBERON:0000478!8.08e-13!24;UBERON:0002367!1.16e-07!11;UBERON:0010147!1.16e-07!11;UBERON:0009846!1.16e-07!11;UBERON:0003353!1.16e-07!11;UBERON:0004902!1.16e-07!11;UBERON:0003820!1.16e-07!11;UBERON:0009847!1.16e-07!11;UBERON:0002097!2.20e-07!40;UBERON:0003937!4.64e-07!12;UBERON:0005399!4.64e-07!12 | |ontology_enrichment_uberon=UBERON:0000476!7.22e-27!3;UBERON:0000920!7.22e-27!3;UBERON:0005631!2.85e-22!14;UBERON:0000158!2.85e-22!14;UBERON:0003124!3.78e-20!7;UBERON:0000478!8.08e-13!24;UBERON:0002367!1.16e-07!11;UBERON:0010147!1.16e-07!11;UBERON:0009846!1.16e-07!11;UBERON:0003353!1.16e-07!11;UBERON:0004902!1.16e-07!11;UBERON:0003820!1.16e-07!11;UBERON:0009847!1.16e-07!11;UBERON:0002097!2.20e-07!40;UBERON:0003937!4.64e-07!12;UBERON:0005399!4.64e-07!12 | ||
|ontology_enrichment_uberon_v019=UBERON:0005631;3.05e-36;10!UBERON:0000158;3.05e-36;10!UBERON:0000305;1.14e-23;7!UBERON:0000478;1.13e-15;24!UBERON:0003124;1.83e-14;3!UBERON:0000920;1.83e-14;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,3.45e-26,14;UBERON:0000158,3.45e-26,14;UBERON:0000305,1.14e-23,7;UBERON:0004871,7.35e-21,8;UBERON:0000478,1.13e-15,24;UBERON:0000920,1.83e-14,3;UBERON:0003124,6.04e-07,7 | |||
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|short_description=p@chr8:102344320..102344363,- | |short_description=p@chr8:102344320..102344363,- | ||
}} | }} |
Latest revision as of 13:35, 31 July 2015
Short description: | p@chr8:102344320..102344363, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr8:102344320..102344363, - |
Coexpression cluster: | C770_Mesenchymal_chorionic_tubular_ovary_Smooth_mesenchymal_granulosa |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
amnion mesenchymal stem cell | 1.23e-32 | 5 |
smooth muscle cell of prostate | 3.81e-21 | 2 |
extraembryonic cell | 1.48e-19 | 19 |
chorionic membrane mesenchymal stem cell | 1.83e-14 | 3 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 3.45e-26 | 14 |
membranous layer | 3.45e-26 | 14 |
amnion | 1.14e-23 | 7 |
somatic layer of lateral plate mesoderm | 7.35e-21 | 8 |
extraembryonic structure | 1.13e-15 | 24 |
egg chorion | 1.83e-14 | 3 |
chorion | 6.04e-07 | 7 |