FFCP PHASE1:Hg19::chr7:99774945..99775026,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=221914 | |EntrezGene=221914 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4450 | |HGNC=4450 | ||
|TSSclassifier=strong | |||
|UniProt=Q8N158 | |UniProt=Q8N158 | ||
|association_with_transcript=0bp_to_ENST00000292377,ENST00000471717,ENST00000480087,ENST00000482569,NM_152742,uc003utv.2,uc003utw.1,uc010lgr.2_5end | |association_with_transcript=0bp_to_ENST00000292377,ENST00000471717,ENST00000480087,ENST00000482569,NM_152742,uc003utv.2,uc003utw.1,uc010lgr.2_5end | ||
|cluster_id=chr7:99774945..99775026,- | |||
|coexpression_cluster_id=C4711 | |||
|description=CAGE_peak_1_at_GPC2_5end | |description=CAGE_peak_1_at_GPC2_5end | ||
|id=chr7:99774945..99775026,- | |id=chr7:99774945..99775026,- | ||
|ontology_enrichment_celltype=CL:0002319!9.64e-13!25;CL:0000133!4.76e-12!59;CL:0000221!2.83e-09!71;CL:0000333!6.45e-09!41;CL:0000095!6.92e-08!17;CL:0000123!6.92e-08!17;CL:0000243!7.36e-07!15;CL:0000125!7.36e-07!15;CL:0000030!7.36e-07!15;CL:0000339!7.36e-07!15 | |ontology_enrichment_celltype=CL:0002319!9.64e-13!25;CL:0000133!4.76e-12!59;CL:0000221!2.83e-09!71;CL:0000333!6.45e-09!41;CL:0000095!6.92e-08!17;CL:0000123!6.92e-08!17;CL:0000243!7.36e-07!15;CL:0000125!7.36e-07!15;CL:0000030!7.36e-07!15;CL:0000339!7.36e-07!15 | ||
|ontology_enrichment_celltype_v019=CL:0002319;1.93e-13;25!CL:0000095;2.78e-08;17!CL:0000243;3.36e-07;15!CL:0000125;3.36e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,2.63e-13,25;CL:0000133,1.37e-12,59;CL:0000333,1.57e-09,41;CL:0000221,4.36e-09,72;CL:0000095,3.31e-08,17;CL:0000123,3.31e-08,17;CL:0000243,3.96e-07,15;CL:0000125,3.96e-07,15;CL:0000030,3.96e-07,15;CL:0000339,3.96e-07,15;CL:0000047,6.34e-07,8 | |||
|ontology_enrichment_development_v019=CL:0000339;3.36e-07;15!CL:0000133;6.58e-07;59 | |||
|ontology_enrichment_disease=DOID:3095!2.48e-08!22;DOID:2994!2.48e-08!22 | |ontology_enrichment_disease=DOID:3095!2.48e-08!22;DOID:2994!2.48e-08!22 | ||
|ontology_enrichment_disease_v019=DOID:3095;2.68e-08;22!DOID:2994;2.68e-08;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,1.13e-08,22;DOID:2994,1.13e-08,22 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p1@GPC2 | |short_description=p1@GPC2 | ||
}} | }} |
Latest revision as of 17:52, 24 September 2015
Short description: | p1@GPC2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_GPC2_5end |
Coexpression cluster: | C4711_Neurons_duodenum_occipital_parietal_temporal_brain_neuroblastoma |
Association with transcript: | 0bp_to_ENST00000292377, ENST00000471717, ENST00000480087, ENST00000482569, NM_152742, uc003utv.2, uc003utw.1, uc010lgr.2_5end |
EntrezGene: | GPC2 |
HGNC: | 4450 |
UniProt: | Q8N158 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 2.63e-13 | 25 |
neurectodermal cell | 1.37e-12 | 59 |
migratory neural crest cell | 1.57e-09 | 41 |
ectodermal cell | 4.36e-09 | 72 |
neuron associated cell | 3.31e-08 | 17 |
neuron associated cell (sensu Vertebrata) | 3.31e-08 | 17 |
glial cell (sensu Vertebrata) | 3.96e-07 | 15 |
glial cell | 3.96e-07 | 15 |
glioblast | 3.96e-07 | 15 |
glioblast (sensu Vertebrata) | 3.96e-07 | 15 |
neuronal stem cell | 6.34e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 1.13e-08 | 22 |
germ cell cancer | 1.13e-08 | 22 |