FFCP PHASE1:Hg19::chr16:68678900..68678907,+: Difference between revisions
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|id=chr16:68678900..68678907,+
|short_description=p11@CDH3
|description=CAGE_peak_11_at_CDH3_5end
|association_with_transcript=161bp_to_ENST00000264012_5end
|Entre...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1001 | |EntrezGene=1001 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1762 | |HGNC=1762 | ||
|TSSclassifier=strong | |||
|UniProt=P22223 | |UniProt=P22223 | ||
|association_with_transcript=161bp_to_ENST00000264012_5end | |||
|cluster_id=chr16:68678900..68678907,+ | |||
|coexpression_cluster_id=C88 | |||
|description=CAGE_peak_11_at_CDH3_5end | |||
|id=chr16:68678900..68678907,+ | |||
|ontology_enrichment_celltype=CL:0000148!6.54e-21!10;CL:0000541!6.54e-21!10;CL:0000147!9.08e-15!14;CL:0000710!1.71e-13!20;CL:0002077!8.49e-13!33;CL:0000075!9.42e-10!27;CL:0002567!5.50e-09!3;CL:0002166!1.18e-08!3;CL:0000221!1.72e-07!71;CL:0002566!2.09e-07!1 | |||
|ontology_enrichment_celltype_v019=CL:0002567;9.74e-88;3!CL:0002566;2.39e-66;1!CL:0000148;1.10e-59;10!CL:0000147;4.85e-43;14!CL:0000710;1.56e-30;20!CL:0000075;5.98e-23;27!CL:0002077;1.94e-16;34 | |||
|ontology_enrichment_celltype_v019_2=CL:0002567,1.52e-87,3;CL:0002566,1.23e-66,1;CL:0000148,1.10e-59,10;CL:0000541,1.10e-59,10;CL:0000147,4.85e-43,14;CL:0000710,1.56e-30,20;CL:0000075,5.98e-23,27;CL:0002077,1.78e-18,34;CL:0000333,7.46e-15,41;CL:0000133,8.52e-11,59;CL:0000221,4.40e-09,72 | |||
|ontology_enrichment_development_v019=CL:0000133;1.35e-08;59 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007029!3.36e-07!1 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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|short_description=p11@CDH3 | |||
}} | }} |
Latest revision as of 13:59, 17 September 2015
Short description: | p11@CDH3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_CDH3_5end |
Coexpression cluster: | C88_Melanocyte_melanoma_Macrophage_Mesenchymal_migratory_Dendritic_Monocytederived |
Association with transcript: | 161bp_to_ENST00000264012_5end |
EntrezGene: | CDH3 |
HGNC: | 1762 |
UniProt: | P22223 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
light melanocyte | 1.52e-87 | 3 |
dark melanocyte | 1.23e-66 | 1 |
melanocyte | 1.10e-59 | 10 |
melanoblast | 1.10e-59 | 10 |
pigment cell | 4.85e-43 | 14 |
neurecto-epithelial cell | 1.56e-30 | 20 |
columnar/cuboidal epithelial cell | 5.98e-23 | 27 |
ecto-epithelial cell | 1.78e-18 | 34 |
migratory neural crest cell | 7.46e-15 | 41 |
neurectodermal cell | 8.52e-11 | 59 |
ectodermal cell | 4.40e-09 | 72 |