FFCP PHASE1:Hg19::chr7:55433709..55433721,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55915 | |EntrezGene=55915 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6509 | |HGNC=6509 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-82bp_to_ENST00000452107_5end | |association_with_transcript=-82bp_to_ENST00000452107_5end | ||
|cluster_id=chr7:55433709..55433721,+ | |||
|description=CAGE_peak_3_at_LANCL2_5end | |description=CAGE_peak_3_at_LANCL2_5end | ||
|id=chr7:55433709..55433721,+ | |id=chr7:55433709..55433721,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002619!1.08e-08!22;UBERON:0001869!4.20e-08!32;UBERON:0001950!5.39e-08!20;UBERON:0001893!9.12e-08!34;UBERON:0002780!1.26e-07!41;UBERON:0001890!1.26e-07!41;UBERON:0006240!1.26e-07!41;UBERON:0001049!1.27e-07!57;UBERON:0005068!1.27e-07!57;UBERON:0006241!1.27e-07!57;UBERON:0007135!1.27e-07!57;UBERON:0002020!1.56e-07!34;UBERON:0003528!1.56e-07!34;UBERON:0000956!2.04e-07!25;UBERON:0000203!2.04e-07!25;UBERON:0003080!2.44e-07!42;UBERON:0002791!2.48e-07!33 | |ontology_enrichment_uberon=UBERON:0002619!1.08e-08!22;UBERON:0001869!4.20e-08!32;UBERON:0001950!5.39e-08!20;UBERON:0001893!9.12e-08!34;UBERON:0002780!1.26e-07!41;UBERON:0001890!1.26e-07!41;UBERON:0006240!1.26e-07!41;UBERON:0001049!1.27e-07!57;UBERON:0005068!1.27e-07!57;UBERON:0006241!1.27e-07!57;UBERON:0007135!1.27e-07!57;UBERON:0002020!1.56e-07!34;UBERON:0003528!1.56e-07!34;UBERON:0000956!2.04e-07!25;UBERON:0000203!2.04e-07!25;UBERON:0003080!2.44e-07!42;UBERON:0002791!2.48e-07!33 | ||
|ontology_enrichment_uberon_v019=UBERON:0002619;4.07e-10;22!UBERON:0001950;2.72e-09;20!UBERON:0000956;1.10e-08;25!UBERON:0000203;1.10e-08;25!UBERON:0001869;1.98e-08;32!UBERON:0003528;5.82e-08;34!UBERON:0002020;5.82e-08;34!UBERON:0001893;1.15e-07;34!UBERON:0002791;1.64e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002619,5.46e-10,22;UBERON:0001950,3.64e-09,20;UBERON:0001869,6.77e-09,32;UBERON:0001893,1.26e-08,34;UBERON:0002780,1.72e-08,41;UBERON:0001890,1.72e-08,41;UBERON:0003080,1.72e-08,41;UBERON:0006240,1.72e-08,41;UBERON:0000073,1.86e-08,53;UBERON:0002616,1.86e-08,53;UBERON:0001049,2.05e-08,56;UBERON:0005068,2.05e-08,56;UBERON:0006241,2.05e-08,56;UBERON:0007135,2.05e-08,56;UBERON:0000956,2.10e-08,25;UBERON:0000203,2.10e-08,25;UBERON:0003528,2.35e-08,34;UBERON:0002020,2.35e-08,34;UBERON:0002791,8.19e-08,32;UBERON:0000955,4.13e-07,68;UBERON:0006238,4.13e-07,68;UBERON:0001737,8.30e-07,9 | |||
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| ||
|short_description=p3@LANCL2 | |short_description=p3@LANCL2 | ||
}} | }} |
Latest revision as of 01:14, 19 September 2015
Short description: | p3@LANCL2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_LANCL2_5end |
Coexpression cluster: | NA |
Association with transcript: | -82bp_to_ENST00000452107_5end |
EntrezGene: | LANCL2 |
HGNC: | 6509 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
regional part of cerebral cortex | 5.46e-10 | 22 |
neocortex | 3.64e-09 | 20 |
cerebral hemisphere | 6.77e-09 | 32 |
telencephalon | 1.26e-08 | 34 |
regional part of forebrain | 1.72e-08 | 41 |
forebrain | 1.72e-08 | 41 |
anterior neural tube | 1.72e-08 | 41 |
future forebrain | 1.72e-08 | 41 |
regional part of nervous system | 1.86e-08 | 53 |
regional part of brain | 1.86e-08 | 53 |
neural tube | 2.05e-08 | 56 |
neural rod | 2.05e-08 | 56 |
future spinal cord | 2.05e-08 | 56 |
neural keel | 2.05e-08 | 56 |
cerebral cortex | 2.10e-08 | 25 |
pallium | 2.10e-08 | 25 |
brain grey matter | 2.35e-08 | 34 |
gray matter | 2.35e-08 | 34 |
regional part of telencephalon | 8.19e-08 | 32 |
brain | 4.13e-07 | 68 |
future brain | 4.13e-07 | 68 |
larynx | 8.30e-07 | 9 |