FFCP PHASE1:Hg19::chr16:68119324..68119364,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr16:68119324..68119364,+
|short_description=p1@NFATC3
|description=CAGE_peak_1_at_NFATC3_5end
|association_with_transcript=0bp_to_ENST00000539828_5end
|Entre...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4775 | |EntrezGene=4775 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7777 | |HGNC=7777 | ||
|TSSclassifier=strong | |||
|UniProt=F8VPH9 | |UniProt=F8VPH9 | ||
|association_with_transcript=0bp_to_ENST00000539828_5end | |||
|cluster_id=chr16:68119324..68119364,+ | |||
|description=CAGE_peak_1_at_NFATC3_5end | |||
|id=chr16:68119324..68119364,+ | |||
|ontology_enrichment_celltype=CL:0000037!6.38e-42!172;CL:0000566!6.38e-42!172;CL:0002032!8.31e-39!165;CL:0000837!8.31e-39!165;CL:0000988!3.36e-38!182;CL:0000738!5.06e-28!140;CL:0002031!1.56e-23!124;CL:0002087!2.81e-22!119;CL:0000542!3.91e-20!53;CL:0000051!3.91e-20!53;CL:0000838!7.27e-20!52;CL:0000763!1.64e-18!112;CL:0000049!1.64e-18!112;CL:0000084!2.04e-12!25;CL:0000827!2.04e-12!25;CL:0000791!2.58e-11!18;CL:0000789!2.58e-11!18;CL:0002420!2.58e-11!18;CL:0002419!2.58e-11!18;CL:0000790!2.58e-11!18;CL:0000766!6.32e-09!76;CL:0000625!6.68e-08!11;CL:0000945!2.67e-07!24;CL:0000826!2.67e-07!24;CL:0000236!4.64e-07!14;CL:0000839!5.40e-07!70;CL:0000557!8.00e-07!71 | |||
|ontology_enrichment_celltype_v019=CL:0000542;1.69e-12;53!CL:0000084;2.08e-12;25!CL:0000791;1.77e-11;18!CL:0000789;1.77e-11;18!CL:0002419;1.77e-11;18!CL:0000625;5.17e-08;11!CL:0000945;2.15e-07;24!CL:0000236;2.77e-07;13!CL:0000988;4.48e-07;177 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,1.35e-41,168;CL:0002032,1.73e-38,161;CL:0000837,1.73e-38,161;CL:0000988,1.83e-38,177;CL:0000738,1.02e-27,136;CL:0002031,3.04e-23,120;CL:0002087,5.43e-22,115;CL:0000542,3.82e-20,53;CL:0000051,3.82e-20,53;CL:0000838,7.11e-20,52;CL:0000763,3.24e-18,108;CL:0000049,3.24e-18,108;CL:0000084,2.02e-12,25;CL:0000827,2.02e-12,25;CL:0000791,2.55e-11,18;CL:0000789,2.55e-11,18;CL:0002420,2.55e-11,18;CL:0002419,2.55e-11,18;CL:0000790,2.55e-11,18;CL:0000766,1.24e-08,72;CL:0000625,6.63e-08,11;CL:0000945,2.65e-07,24;CL:0000826,2.65e-07,24;CL:0000236,4.61e-07,14 | |||
|ontology_enrichment_development_v019=CL:0000051;1.69e-12;53!CL:0000790;1.77e-11;18 | |||
|ontology_enrichment_disease=DOID:2531!1.65e-15!51;DOID:0060083!1.65e-15!51;DOID:1240!5.25e-15!39;DOID:8692!6.97e-13!31 | |||
|ontology_enrichment_disease_v019=DOID:8692;9.24e-13;31!DOID:1240;6.04e-12;39!DOID:2531;7.95e-10;51!DOID:0060083;7.95e-10;51 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,1.62e-15,51;DOID:0060083,1.62e-15,51;DOID:1240,5.16e-15,39;DOID:8692,6.87e-13,31 | |||
|ontology_enrichment_uberon=UBERON:0002390!1.79e-11!102;UBERON:0003061!1.79e-11!102;UBERON:0002193!1.67e-10!112;UBERON:0007023!8.55e-09!115;UBERON:0000178!2.91e-08!15;UBERON:0000179!2.91e-08!15;UBERON:0000463!2.91e-08!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.93e-08;15!UBERON:0000179;1.93e-08;15!UBERON:0000463;1.93e-08;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.16e-11,98;UBERON:0003061,3.16e-11,98;UBERON:0002193,3.06e-10,108;UBERON:0007023,7.60e-09,114;UBERON:0000178,2.89e-08,15;UBERON:0000179,2.89e-08,15;UBERON:0000463,2.89e-08,15 | |||
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| ||
|short_description=p1@NFATC3 | |||
}} | }} |
Latest revision as of 12:58, 17 September 2015
Short description: | p1@NFATC3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_NFATC3_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000539828_5end |
EntrezGene: | NFATC3 |
HGNC: | 7777 |
UniProt: | F8VPH9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 1.35e-41 | 168 |
hematopoietic oligopotent progenitor cell | 1.73e-38 | 161 |
hematopoietic multipotent progenitor cell | 1.73e-38 | 161 |
hematopoietic cell | 1.83e-38 | 177 |
leukocyte | 1.02e-27 | 136 |
hematopoietic lineage restricted progenitor cell | 3.04e-23 | 120 |
nongranular leukocyte | 5.43e-22 | 115 |
lymphocyte | 3.82e-20 | 53 |
common lymphoid progenitor | 3.82e-20 | 53 |
lymphoid lineage restricted progenitor cell | 7.11e-20 | 52 |
myeloid cell | 3.24e-18 | 108 |
common myeloid progenitor | 3.24e-18 | 108 |
T cell | 2.02e-12 | 25 |
pro-T cell | 2.02e-12 | 25 |
mature alpha-beta T cell | 2.55e-11 | 18 |
alpha-beta T cell | 2.55e-11 | 18 |
immature T cell | 2.55e-11 | 18 |
mature T cell | 2.55e-11 | 18 |
immature alpha-beta T cell | 2.55e-11 | 18 |
myeloid leukocyte | 1.24e-08 | 72 |
CD8-positive, alpha-beta T cell | 6.63e-08 | 11 |
lymphocyte of B lineage | 2.65e-07 | 24 |
pro-B cell | 2.65e-07 | 24 |
B cell | 4.61e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 3.16e-11 | 98 |
blood island | 3.16e-11 | 98 |
hemolymphoid system | 3.06e-10 | 108 |
adult organism | 7.60e-09 | 114 |
blood | 2.89e-08 | 15 |
haemolymphatic fluid | 2.89e-08 | 15 |
organism substance | 2.89e-08 | 15 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 1.62e-15 | 51 |
immune system cancer | 1.62e-15 | 51 |
leukemia | 5.16e-15 | 39 |
myeloid leukemia | 6.87e-13 | 31 |