FFCP PHASE1:Hg19::chr16:68119294..68119305,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr16:68119294..68119305,+
|short_description=p6@NFATC3
|description=CAGE_peak_6_at_NFATC3_5end
|association_with_transcript=25bp_to_NM_004555,NM_173163,NM_1731...") |
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(9 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4775 | |EntrezGene=4775 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7777 | |HGNC=7777 | ||
|TSSclassifier=strong | |||
|UniProt=B5B2S0,Q12968,B5B2S1 | |UniProt=B5B2S0,Q12968,B5B2S1 | ||
|association_with_transcript=25bp_to_NM_004555,NM_173163,NM_173165_5end | |||
|cluster_id=chr16:68119294..68119305,+ | |||
|description=CAGE_peak_6_at_NFATC3_5end | |||
|id=chr16:68119294..68119305,+ | |||
|ontology_enrichment_celltype=CL:0000037!2.47e-18!172;CL:0000566!2.47e-18!172;CL:0002032!3.37e-17!165;CL:0000837!3.37e-17!165;CL:0000988!6.71e-16!182;CL:0000738!1.05e-11!140;CL:0000838!3.63e-11!52;CL:0000542!4.77e-11!53;CL:0000051!4.77e-11!53;CL:0002031!3.65e-10!124;CL:0002087!6.11e-09!119;CL:0000763!1.18e-07!112;CL:0000049!1.18e-07!112 | |||
|ontology_enrichment_celltype_v019=CL:0000236;1.52e-11;13!CL:0000791;1.77e-09;18!CL:0000789;1.77e-09;18!CL:0002419;1.77e-09;18!CL:0000542;4.46e-09;53!CL:0000084;1.74e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,1.60e-18,168;CL:0000988,1.43e-17,177;CL:0002032,3.03e-17,161;CL:0000837,3.03e-17,161;CL:0000838,2.39e-14,52;CL:0000542,6.12e-14,53;CL:0000051,6.12e-14,53;CL:0000738,1.09e-11,136;CL:0000236,6.39e-11,14;CL:0000791,1.16e-09,18;CL:0000789,1.16e-09,18;CL:0002420,1.16e-09,18;CL:0002419,1.16e-09,18;CL:0000790,1.16e-09,18;CL:0002031,8.28e-09,120;CL:0000084,1.29e-07,25;CL:0000827,1.29e-07,25 | |||
|ontology_enrichment_development_v019=CL:0000790;1.77e-09;18!CL:0000051;4.46e-09;53 | |||
|ontology_enrichment_disease=DOID:1240!1.07e-07!39;DOID:2531!2.93e-07!51;DOID:0060083!2.93e-07!51 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p6@NFATC3 | |||
}} | }} |
Latest revision as of 12:57, 17 September 2015
Short description: | p6@NFATC3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_NFATC3_5end |
Coexpression cluster: | NA |
Association with transcript: | 25bp_to_NM_004555, NM_173163, NM_173165_5end |
EntrezGene: | NFATC3 |
HGNC: | 7777 |
UniProt: | B5B2S0Q12968B5B2S1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 1.60e-18 | 168 |
hematopoietic cell | 1.43e-17 | 177 |
hematopoietic oligopotent progenitor cell | 3.03e-17 | 161 |
hematopoietic multipotent progenitor cell | 3.03e-17 | 161 |
lymphoid lineage restricted progenitor cell | 2.39e-14 | 52 |
lymphocyte | 6.12e-14 | 53 |
common lymphoid progenitor | 6.12e-14 | 53 |
leukocyte | 1.09e-11 | 136 |
B cell | 6.39e-11 | 14 |
mature alpha-beta T cell | 1.16e-09 | 18 |
alpha-beta T cell | 1.16e-09 | 18 |
immature T cell | 1.16e-09 | 18 |
mature T cell | 1.16e-09 | 18 |
immature alpha-beta T cell | 1.16e-09 | 18 |
hematopoietic lineage restricted progenitor cell | 8.28e-09 | 120 |
T cell | 1.29e-07 | 25 |
pro-T cell | 1.29e-07 | 25 |