FFCP PHASE1:Hg19::chr7:45025815..45025835,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=285958 | |EntrezGene=285958 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=27797 | |HGNC=27797 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=400bp_to_uc003tmk.3_5end | |association_with_transcript=400bp_to_uc003tmk.3_5end | ||
|cluster_id=chr7:45025815..45025835,- | |||
|coexpression_cluster_id=C80 | |||
|description=CAGE_peak_5_at_SNHG15_5end | |description=CAGE_peak_5_at_SNHG15_5end | ||
|id=chr7:45025815..45025835,- | |id=chr7:45025815..45025835,- | ||
|ontology_enrichment_celltype=CL:0000988!1.92e-18!182;CL:0000037!1.20e-17!172;CL:0000566!1.20e-17!172;CL:0002032!2.19e-17!165;CL:0000837!2.19e-17!165;CL:0000763!3.18e-10!112;CL:0000049!3.18e-10!112;CL:0000738!1.91e-09!140;CL:0000453!3.21e-09!5;CL:0000990!1.87e-08!8;CL:0000063!3.54e-08!578;CL:0000542!1.43e-07!53;CL:0000051!1.43e-07!53;CL:0000548!1.86e-07!679;CL:0000004!1.86e-07!679;CL:0000255!1.86e-07!679;CL:0000003!2.64e-07!722;CL:0000012!2.84e-07!682;CL:0000080!4.63e-07!6;CL:0002087!4.74e-07!119;CL:0000134!5.36e-07!358;CL:0000838!6.28e-07!52 | |ontology_enrichment_celltype=CL:0000988!1.92e-18!182;CL:0000037!1.20e-17!172;CL:0000566!1.20e-17!172;CL:0002032!2.19e-17!165;CL:0000837!2.19e-17!165;CL:0000763!3.18e-10!112;CL:0000049!3.18e-10!112;CL:0000738!1.91e-09!140;CL:0000453!3.21e-09!5;CL:0000990!1.87e-08!8;CL:0000063!3.54e-08!578;CL:0000542!1.43e-07!53;CL:0000051!1.43e-07!53;CL:0000548!1.86e-07!679;CL:0000004!1.86e-07!679;CL:0000255!1.86e-07!679;CL:0000003!2.64e-07!722;CL:0000012!2.84e-07!682;CL:0000080!4.63e-07!6;CL:0002087!4.74e-07!119;CL:0000134!5.36e-07!358;CL:0000838!6.28e-07!52 | ||
|ontology_enrichment_celltype_v019=CL:0001014;2.55e-22;2!CL:0001016;2.55e-22;2!CL:0000453;1.15e-19;5!CL:0000990;3.43e-11;8!CL:0000451;2.98e-09;10!CL:0000840;4.65e-08;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0001014,1.66e-22,2;CL:0001016,1.66e-22,2;CL:0000453,5.74e-20,5;CL:0000990,2.34e-11,8;CL:0000988,4.04e-11,177;CL:0000451,2.18e-09,10;CL:0000840,4.04e-08,5;CL:0001029,4.04e-08,5;CL:0002032,1.38e-07,161;CL:0000837,1.38e-07,161;CL:0000037,3.40e-07,168 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2531!8.75e-20!51;DOID:0060083!8.75e-20!51;DOID:1240!1.78e-14!39;DOID:8692!1.63e-11!31;DOID:0060058!2.73e-10!10;DOID:162!2.68e-07!235;DOID:14566!3.19e-07!239 | |ontology_enrichment_disease=DOID:2531!8.75e-20!51;DOID:0060083!8.75e-20!51;DOID:1240!1.78e-14!39;DOID:8692!1.63e-11!31;DOID:0060058!2.73e-10!10;DOID:162!2.68e-07!235;DOID:14566!3.19e-07!239 | ||
|ontology_enrichment_disease_v019=DOID:0060060;3.26e-12;1!DOID:0060061;3.26e-12;1!DOID:9119;3.26e-12;1!DOID:8691;3.26e-12;1!DOID:0060058;4.24e-10;10 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,2.88e-12,51;DOID:0060083,2.88e-12,51;DOID:9119,2.93e-12,1;DOID:0060060,3.27e-12,1;DOID:0060061,3.27e-12,1;DOID:8691,3.27e-12,1;DOID:0060058,4.96e-10,10 | |||
|ontology_enrichment_uberon=UBERON:0001737!5.38e-14!9;UBERON:0001557!6.78e-08!19 | |ontology_enrichment_uberon=UBERON:0001737!5.38e-14!9;UBERON:0001557!6.78e-08!19 | ||
|ontology_enrichment_uberon_v019=UBERON:0001737;8.83e-19;9!UBERON:0001557;8.83e-19;9!UBERON:0002331;5.61e-10;10!UBERON:0000178;8.12e-07;15!UBERON:0000179;8.12e-07;15!UBERON:0000463;8.12e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,1.07e-18,9;UBERON:0002331,4.38e-10,10;UBERON:0000358,4.38e-10,10;UBERON:0000307,4.38e-10,10;UBERON:0000091,4.38e-10,10;UBERON:0000087,4.38e-10,10;UBERON:0007010,4.38e-10,10;UBERON:0007806,4.38e-10,10;UBERON:0008780,4.38e-10,10;UBERON:0005728,4.38e-10,10;UBERON:0001557,5.51e-09,19;UBERON:0000178,6.91e-07,15;UBERON:0000179,6.91e-07,15;UBERON:0000463,6.91e-07,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.305653622991805,0.821005894499457,0.708397031823113,0.393364276848904,0.383829398097213,0.464448369948228,0,0,0,0.154934401160603,1.13735385989937,0,0.553995408531877,0.601633342410425,0.434021741431704,0,0,0,0,0,0,0,0,0,0,0,0.236482229888585,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13477044938228,0,0,0,0,0,0.368277635987565,0,0.422510572623884,0,0.419317291016752,0.22465726229299,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569212969109448,0,0,0,0,0,0,0,0.205601498999509,0,0,0,0,0.222820913770347,0,0,0,0,0,0,0.276350017785848,0,0,0,0,0.226618685395132,0,0.34362744548263,0,0,0,0,0,0,0,0,0.821127996921047,0.201606743224732,0,0,0,0.670700859703636,0,0,0,0,0,0,0.0945348171640679,0,0,0,0,0.370784442784429,0.324547393654683,0,0,0.238490624305342,0,0,0.198762407366705,0,0,0,0,0.275118041940067,0.208994966536811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0.163461903113459,0,0,0.234321431833797,0,0,0,0,0.161872944368132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211931901159562,0,0,0,0,0,0,0.252433774244115,0,0,0,0,0,0,0,0,0.121973706129595,0,0,0,0,0.36497735907583,0,0,0,0,0,0.236613600079688,0.505754070234305,0.482022059766964,1.43382164552112,0.435758888184812,1.42362371466658,1.07865046528132,1.17732879075208,0.769494313892781,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0.063497894292169,0.381988425558278,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0.257207374262142,0,0.266422179016099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0.336255431980582,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0.431428401637234,0.320182673410333,0.303127571446259,0,0,0.248107807818777,0,0.280660094433074,0,0,0.160853921143607,0,0,0,0,0,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0.105551628892876,0,0,0.215915916102139,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0,0,0,0,0.650060246036521,0,0,0,0.307007349452259,0,0,0.145016693914229,0.0852266274161009,0.0890320356467374,0.165284915360978,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.48763373908959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411362273086194,0,0,0,0,0,0,0.371606350251437,0,0,0.318852545457645,0.199579371432817,0.957526850661834,0.635020748171649,0.324621940274555,0.280797178113459,0,0.313359791546046,0,1.69291777801603,0.642352300414798,0,0,0,0,0,0,0.19538809540204,0.278406173895242,0,1.08182271390393,2.33150377598474,0,0,0,0,0.111443384277478,0,0,0,0.307160702099232,0,0,0,1.15362711958732,0,0,0,0,0,0.123084805461069,0,0,0,0.511572370226872,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113942055847001,0,0,0,0,0,0,0,0,0.332423363800313,0.451191321234361,0,0,0.37950746544837,0.158936578980379,0,0,0,0,0,0,0,1.48260564340311,1.35920332841153,1.56632924258183,0,0,0,0.182454789215666,0,0,0,0,0,0,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0,0,0.290268993867255,0.146178634172371,0.410577285266046,0,0,0,0.274083849293502,0,0,0,0,0,0,0,0,0.171594997861965,0.288109595976299,0,0,0,0.104602846312333,0,0,0,0,0,0,2.10309883423452,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254019996197353,0,0,0,0,0,5.17439950568451,1.5476039091159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.06720276974141,0,0,0,0,0,0,0.171086837884329,0,0,0,0,0,0,0.365377795142688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.454947352624943,0.285465333544967,0,0,0,0,0,0.554805861502613,0.189403005275089,0,0,0,0.302461847526478,0.15543720058278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0.489473409012935,0,0,0.219284049578707,0,0.192914038270915,0.168942440653073,0,0,0,0,1.7537427795545,0.930053882193542,0.981392365535065,0,0.245772908753719,0,2.19986135440423,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157723490002507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115525666150338,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.345701962667338,0,0,0,0,0,0,0,0,0,0.215927591218621,0,0,0,0,0,0,0,0,0,0,0,0.0852134047591577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.470317296361523,0,0,0,0,0,0,0,0,0.199882311849858,0,0,0,0,0,0,0.157771562193185,0,0,0,0,0,0,0,0,0,0.101988829741982,0,0.0918948995348449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0814032686109745,0,0,0,0,0,0,0,0,0.320568492303233 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| ||
|short_description=p5@SNHG15 | |short_description=p5@SNHG15 | ||
}} | }} |
Latest revision as of 18:31, 18 September 2015
Short description: | p5@SNHG15 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_SNHG15_5end |
Coexpression cluster: | C80_immature_migratory_CD14_Dendritic_splenic_cord_Mast |
Association with transcript: | 400bp_to_uc003tmk.3_5end |
EntrezGene: | SNHG15 |
HGNC: | 27797 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD1a-positive Langerhans cell | 1.66e-22 | 2 |
immature CD1a-positive Langerhans cell | 1.66e-22 | 2 |
Langerhans cell | 5.74e-20 | 5 |
conventional dendritic cell | 2.34e-11 | 8 |
hematopoietic cell | 4.04e-11 | 177 |
dendritic cell | 2.18e-09 | 10 |
immature conventional dendritic cell | 4.04e-08 | 5 |
common dendritic progenitor | 4.04e-08 | 5 |
hematopoietic oligopotent progenitor cell | 1.38e-07 | 161 |
hematopoietic multipotent progenitor cell | 1.38e-07 | 161 |
hematopoietic stem cell | 3.40e-07 | 168 |
Ontology term | p-value | n |
---|---|---|
larynx | 1.07e-18 | 9 |
umbilical cord | 4.38e-10 | 10 |
blastocyst | 4.38e-10 | 10 |
blastula | 4.38e-10 | 10 |
bilaminar disc | 4.38e-10 | 10 |
inner cell mass | 4.38e-10 | 10 |
cleaving embryo | 4.38e-10 | 10 |
connecting stalk | 4.38e-10 | 10 |
inner cell mass derived epiblast | 4.38e-10 | 10 |
extraembryonic mesoderm | 4.38e-10 | 10 |
upper respiratory tract | 5.51e-09 | 19 |
blood | 6.91e-07 | 15 |
haemolymphatic fluid | 6.91e-07 | 15 |
organism substance | 6.91e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 2.88e-12 | 51 |
immune system cancer | 2.88e-12 | 51 |
acute myeloid leukemia | 2.93e-12 | 1 |
non-Hodgkin lymphoma | 3.27e-12 | 1 |
cutaneous T cell lymphoma | 3.27e-12 | 1 |
mycosis fungoides | 3.27e-12 | 1 |
lymphoma | 4.96e-10 | 10 |