FFCP PHASE1:Hg19::chr7:27154961..27154973,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000517635_5end | |association_with_transcript=0bp_to_ENST00000517635_5end | ||
|cluster_id=chr7:27154961..27154973,+ | |||
|description=CAGE_peak_1_at_ENST00000517635_5end | |description=CAGE_peak_1_at_ENST00000517635_5end | ||
|id=chr7:27154961..27154973,+ | |id=chr7:27154961..27154973,+ | ||
|ontology_enrichment_celltype=CL:1000507!6.88e-07!12;CL:1000494!6.88e-07!12 | |ontology_enrichment_celltype=CL:1000507!6.88e-07!12;CL:1000494!6.88e-07!12 | ||
|ontology_enrichment_celltype_v019=CL:0002596;4.00e-15;2!CL:0002600;1.11e-14;2!CL:1000507;2.47e-11;10!CL:1000494;2.47e-11;10!CL:0000322;4.30e-10;3!CL:0000082;5.85e-09;19!CL:1001319;3.44e-08;1!CL:1000600;3.44e-08;1!CL:0002591;3.44e-08;1!CL:1000449;1.35e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0002596,3.37e-15,2;CL:0002600,4.80e-15,2;CL:1000507,2.88e-11,10;CL:1000494,2.88e-11,10;CL:0000322,4.73e-10,3;CL:0000082,5.19e-09,19;CL:0002591,4.41e-08,1;CL:1001319,6.24e-08,1;CL:1000600,6.24e-08,1;CL:1000449,1.49e-07,15;CL:0000192,3.37e-07,43;CL:0000514,3.37e-07,43 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:1324;1.35e-07;15!DOID:0050615;3.98e-07;16 | |||
|ontology_enrichment_disease_v019_2=DOID:1324,1.21e-07,15;DOID:0050615,3.59e-07,16 | |||
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|ontology_enrichment_uberon_v019_2=UBERON:0005396,3.37e-15,2;UBERON:0004810,2.88e-11,10;UBERON:0009569,5.77e-11,112;UBERON:0005177,1.08e-10,101;UBERON:0003914,2.37e-10,117;UBERON:0004821,4.73e-10,3;UBERON:0003215,4.73e-10,3;UBERON:0010368,4.73e-10,3;UBERON:0009911,4.73e-10,3;UBERON:0002299,4.73e-10,3;UBERON:0006524,4.73e-10,3;UBERON:0008874,4.73e-10,3;UBERON:0002169,4.73e-10,3;UBERON:0004894,4.73e-10,3;UBERON:0002100,5.06e-10,199;UBERON:0005178,3.06e-09,34;UBERON:0002224,3.06e-09,34;UBERON:0004802,5.19e-09,19;UBERON:0000115,5.19e-09,19;UBERON:0005181,5.93e-09,35;UBERON:0004807,2.06e-08,28;UBERON:0003103,2.27e-08,68;UBERON:0000072,2.45e-08,47;UBERON:0008947,3.52e-08,38;UBERON:0003258,3.52e-08,38;UBERON:0000025,4.19e-08,192;UBERON:0004645,6.24e-08,1;UBERON:0001256,6.24e-08,1;UBERON:0001259,6.24e-08,1;UBERON:0002048,9.44e-08,22;UBERON:0000117,9.44e-08,22;UBERON:0000171,9.44e-08,22;UBERON:0000170,9.44e-08,22;UBERON:0005597,9.44e-08,22;UBERON:0000118,9.44e-08,22;UBERON:0007196,1.47e-07,15;UBERON:0001558,1.47e-07,15;UBERON:0004211,1.49e-07,15;UBERON:0009773,1.49e-07,15;UBERON:0001231,1.49e-07,15;UBERON:0001285,1.49e-07,15;UBERON:0007684,1.49e-07,15;UBERON:0004208,1.49e-07,15;UBERON:0000915,1.70e-07,52;UBERON:0000489,1.90e-07,31;UBERON:0000065,4.11e-07,54;UBERON:0006555,4.37e-07,16;UBERON:0004819,4.37e-07,16 | |||
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|short_description=p1@ENST00000517635 | |short_description=p1@ENST00000517635 | ||
}} | }} |
Latest revision as of 09:00, 31 July 2015
Short description: | p1@ENST00000517635 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000517635_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000517635_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the carotid artery | 3.37e-15 | 2 |
smooth muscle cell of trachea | 4.80e-15 | 2 |
kidney tubule cell | 2.88e-11 | 10 |
nephron tubule epithelial cell | 2.88e-11 | 10 |
pneumocyte | 4.73e-10 | 3 |
epithelial cell of lung | 5.19e-09 | 19 |
smooth muscle cell of the pulmonary artery | 4.41e-08 | 1 |
bladder cell | 6.24e-08 | 1 |
lower urinary tract cell | 6.24e-08 | 1 |
epithelial cell of nephron | 1.49e-07 | 15 |
smooth muscle cell | 3.37e-07 | 43 |
smooth muscle myoblast | 3.37e-07 | 43 |
Ontology term | p-value | n |
---|---|---|
lung cancer | 1.21e-07 | 15 |
respiratory system cancer | 3.59e-07 | 16 |