FFCP PHASE1:Hg19::chr16:67204418..67204453,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr16:67204418..67204453,+
|short_description=p1@NOL3
|description=CAGE_peak_1_at_NOL3_5end
|association_with_transcript=0bp_to_uc010vjc.1_5end
|EntrezGene=899...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=8996 | |EntrezGene=8996 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7869 | |HGNC=7869 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_uc010vjc.1_5end | |||
|cluster_id=chr16:67204418..67204453,+ | |||
|description=CAGE_peak_1_at_NOL3_5end | |||
|id=chr16:67204418..67204453,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.91e-08!180;CL:0000066!8.91e-07!254 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!8.10e-17!365;UBERON:0000468!2.56e-15!659;UBERON:0000467!3.06e-15!625;UBERON:0000480!4.37e-15!626;UBERON:0000481!1.08e-14!347;UBERON:0000477!2.31e-13!286;UBERON:0004111!5.72e-13!241;UBERON:0000483!8.94e-12!309;UBERON:0000119!4.03e-11!312;UBERON:0000922!5.15e-10!612;UBERON:0000025!1.34e-09!194;UBERON:0000923!1.42e-09!604;UBERON:0005291!1.42e-09!604;UBERON:0006598!1.42e-09!604;UBERON:0002532!1.42e-09!604;UBERON:0003104!1.66e-09!238;UBERON:0009142!1.66e-09!238;UBERON:0002050!2.07e-09!605;UBERON:0005423!2.07e-09!605;UBERON:0000062!2.42e-09!511;UBERON:0000914!1.82e-08!83;UBERON:0002329!1.82e-08!83;UBERON:0003077!1.82e-08!83;UBERON:0003059!1.82e-08!83;UBERON:0007282!1.82e-08!83;UBERON:0009618!1.82e-08!83;UBERON:0007285!1.82e-08!83;UBERON:0005256!2.36e-08!143;UBERON:0002100!2.65e-08!216;UBERON:0000464!6.41e-08!104;UBERON:0007023!1.49e-07!115;UBERON:0003102!2.26e-07!95;UBERON:0004290!8.77e-07!70;UBERON:0000064!9.54e-07!219 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004111,1.38e-12,240;UBERON:0000483,2.02e-12,306;UBERON:0000119,1.11e-11,309;UBERON:0000025,3.83e-09,192;UBERON:0003102,4.59e-08,99;UBERON:0000922,1.17e-07,592;UBERON:0002050,2.56e-07,564;UBERON:0005423,3.02e-07,581;UBERON:0007023,3.65e-07,114;UBERON:0007503,3.69e-07,78;UBERON:0000923,3.78e-07,560;UBERON:0010316,3.78e-07,560;UBERON:0005291,3.78e-07,560;UBERON:0006598,3.78e-07,560;UBERON:0010317,3.78e-07,560;UBERON:0002532,3.78e-07,560;UBERON:0007524,4.29e-07,73;UBERON:0003077,4.55e-07,72;UBERON:0007285,4.55e-07,72;UBERON:0002329,8.26e-07,71;UBERON:0003059,8.26e-07,71;UBERON:0007282,8.26e-07,71;UBERON:0004290,8.26e-07,71;UBERON:0009618,8.26e-07,71;UBERON:0000486,9.51e-07,83 | |||
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| ||
|short_description=p1@NOL3 | |||
}} | }} |
Latest revision as of 09:57, 17 September 2015
Short description: | p1@NOL3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_NOL3_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_uc010vjc.1_5end |
EntrezGene: | NOL3 |
HGNC: | 7869 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
anatomical conduit | 1.38e-12 | 240 |
epithelium | 2.02e-12 | 306 |
cell layer | 1.11e-11 | 309 |
tube | 3.83e-09 | 192 |
surface structure | 4.59e-08 | 99 |
embryo | 1.17e-07 | 592 |
embryonic structure | 2.56e-07 | 564 |
developing anatomical structure | 3.02e-07 | 581 |
adult organism | 3.65e-07 | 114 |
epithelial vesicle | 3.69e-07 | 78 |
germ layer | 3.78e-07 | 560 |
germ layer / neural crest | 3.78e-07 | 560 |
embryonic tissue | 3.78e-07 | 560 |
presumptive structure | 3.78e-07 | 560 |
germ layer / neural crest derived structure | 3.78e-07 | 560 |
epiblast (generic) | 3.78e-07 | 560 |
dense mesenchyme tissue | 4.29e-07 | 73 |
paraxial mesoderm | 4.55e-07 | 72 |
presumptive paraxial mesoderm | 4.55e-07 | 72 |
somite | 8.26e-07 | 71 |
presomitic mesoderm | 8.26e-07 | 71 |
presumptive segmental plate | 8.26e-07 | 71 |
dermomyotome | 8.26e-07 | 71 |
trunk paraxial mesoderm | 8.26e-07 | 71 |
multilaminar epithelium | 9.51e-07 | 83 |