FFCP PHASE1:Hg19::chr16:66638616..66638663,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr16:66638616..66638663,+
|short_description=p1@CMTM3
|description=CAGE_peak_1_at_CMTM3_5end
|association_with_transcript=0bp_to_NR_037619,uc002epy.2_5end
|En...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=123920 | |EntrezGene=123920 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19174 | |HGNC=19174 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_NR_037619,uc002epy.2_5end | |||
|cluster_id=chr16:66638616..66638663,+ | |||
|description=CAGE_peak_1_at_CMTM3_5end | |||
|id=chr16:66638616..66638663,+ | |||
|ontology_enrichment_celltype=CL:0002371!3.23e-23!591;CL:0000144!6.33e-20!625;CL:0000766!1.77e-16!76;CL:0000048!2.94e-16!430;CL:0000557!3.88e-16!71;CL:0002320!7.13e-15!365;CL:0002009!1.25e-14!65;CL:0000723!1.36e-14!436;CL:0002194!1.93e-14!63;CL:0000576!1.93e-14!63;CL:0000040!1.93e-14!63;CL:0000559!1.93e-14!63;CL:0000134!3.17e-14!358;CL:0002057!4.88e-14!42;CL:0000839!5.07e-14!70;CL:0000034!6.80e-14!444;CL:0000988!1.47e-13!182;CL:0000219!1.81e-13!390;CL:0000738!4.58e-13!140;CL:0000037!1.35e-12!172;CL:0000566!1.35e-12!172;CL:0000763!1.80e-12!112;CL:0000049!1.80e-12!112;CL:0000003!2.15e-12!722;CL:0002087!8.59e-12!119;CL:0002031!1.36e-11!124;CL:0002032!3.22e-11!165;CL:0000837!3.22e-11!165;CL:0000860!6.02e-11!45;CL:0000115!2.15e-10!35;CL:0002078!6.35e-10!44;CL:0000012!1.34e-08!682;CL:0000548!1.94e-08!679;CL:0000004!1.94e-08!679;CL:0000255!1.94e-08!679;CL:0000213!3.15e-07!57;CL:0000215!3.15e-07!57;CL:1000449!5.08e-07!16;CL:0000222!5.12e-07!119;CL:0002139!6.31e-07!24 | |||
|ontology_enrichment_celltype_v019=CL:0000473;1.84e-11;39!CL:0000234;1.84e-11;39!CL:0000860;1.40e-09;33!CL:0002057;1.40e-09;33!CL:0000115;3.99e-09;36!CL:0000576;4.40e-09;48!CL:0000766;5.57e-09;69!CL:1000449;7.09e-08;15!CL:0002078;2.36e-07;45!CL:0002139;5.90e-07;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,5.64e-20,72;CL:0000557,9.62e-20,67;CL:0002009,3.24e-18,61;CL:0002194,4.53e-18,59;CL:0000576,4.53e-18,59;CL:0000040,4.53e-18,59;CL:0000559,4.53e-18,59;CL:0000473,1.09e-17,48;CL:0000234,1.09e-17,48;CL:0000839,2.27e-17,66;CL:0000048,5.20e-17,427;CL:0002320,7.89e-16,361;CL:0000723,2.82e-15,433;CL:0000738,3.35e-15,136;CL:0000988,3.55e-15,177;CL:0000134,3.64e-15,354;CL:0000763,8.52e-15,108;CL:0000049,8.52e-15,108;CL:0000034,1.48e-14,441;CL:0000037,1.75e-14,168;CL:0000219,2.50e-14,386;CL:0000860,4.84e-14,42;CL:0002057,4.84e-14,42;CL:0002087,5.47e-14,115;CL:0002031,9.81e-14,120;CL:0002032,5.12e-13,161;CL:0000837,5.12e-13,161;CL:0000115,9.42e-11,36;CL:0002078,2.87e-10,45;CL:1000449,7.50e-08,15;CL:0000213,1.60e-07,58;CL:0000215,1.60e-07,58;CL:0000222,4.86e-07,121;CL:0002139,6.29e-07,24 | |||
|ontology_enrichment_development_v019=CL:0002057;1.14e-10;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003081!1.39e-27!216;UBERON:0002193!4.22e-18!112;UBERON:0002390!4.26e-16!102;UBERON:0003061!4.26e-16!102;UBERON:0002405!1.09e-14!115;UBERON:0002384!1.21e-13!375;UBERON:0002371!3.90e-13!80;UBERON:0001474!3.62e-12!86;UBERON:0004535!7.29e-11!110;UBERON:0001009!5.89e-10!113;UBERON:0004765!6.06e-10!101;UBERON:0001434!6.06e-10!101;UBERON:0002204!4.40e-09!167;UBERON:0002049!3.25e-08!79;UBERON:0007798!3.25e-08!79;UBERON:0000926!5.59e-08!448;UBERON:0004120!5.59e-08!448;UBERON:0006603!5.59e-08!448;UBERON:0003914!1.89e-07!118;UBERON:0004211!5.08e-07!16;UBERON:0001285!5.08e-07!16;UBERON:0007684!5.08e-07!16;UBERON:0003220!5.08e-07!16;UBERON:0004208!5.08e-07!16;UBERON:0006555!9.26e-07!17;UBERON:0005103!9.26e-07!17;UBERON:0000083!9.26e-07!17;UBERON:0009201!9.26e-07!17;UBERON:0004819!9.26e-07!17;UBERON:0006553!9.26e-07!17;UBERON:0003074!9.26e-07!17;UBERON:0003060!9.26e-07!17 | |||
|ontology_enrichment_uberon_v019=UBERON:0006555;7.09e-08;15!UBERON:0004819;7.09e-08;15!UBERON:0001285;7.09e-08;15!UBERON:0007684;7.09e-08;15!UBERON:0000353;4.08e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003081,1.40e-27,203;UBERON:0002193,4.55e-21,108;UBERON:0000926,1.75e-19,315;UBERON:0004120,1.75e-19,315;UBERON:0006603,1.75e-19,315;UBERON:0002390,5.15e-19,98;UBERON:0003061,5.15e-19,98;UBERON:0002405,2.27e-18,93;UBERON:0002371,4.36e-16,76;UBERON:0001474,7.47e-15,82;UBERON:0002384,1.52e-14,371;UBERON:0004765,8.95e-14,90;UBERON:0001434,3.81e-12,100;UBERON:0004535,3.34e-11,109;UBERON:0002204,1.64e-10,167;UBERON:0001009,2.85e-10,112;UBERON:0002049,1.49e-08,78;UBERON:0007798,1.49e-08,78;UBERON:0004211,7.50e-08,15;UBERON:0009773,7.50e-08,15;UBERON:0001231,7.50e-08,15;UBERON:0001285,7.50e-08,15;UBERON:0007684,7.50e-08,15;UBERON:0004208,7.50e-08,15;UBERON:0003914,1.12e-07,117;UBERON:0006555,1.58e-07,16;UBERON:0004819,1.58e-07,16;UBERON:0000353,4.38e-07,15;UBERON:0000055,8.63e-07,68 | |||
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| ||
|short_description=p1@CMTM3 | |||
}} | }} |
Latest revision as of 08:47, 17 September 2015
Short description: | p1@CMTM3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CMTM3_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_NR_037619, uc002epy.2_5end |
EntrezGene: | CMTM3 |
HGNC: | 19174 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lateral plate mesoderm | 1.40e-27 | 203 |
hemolymphoid system | 4.55e-21 | 108 |
mesoderm | 1.75e-19 | 315 |
mesoderm-derived structure | 1.75e-19 | 315 |
presumptive mesoderm | 1.75e-19 | 315 |
hematopoietic system | 5.15e-19 | 98 |
blood island | 5.15e-19 | 98 |
immune system | 2.27e-18 | 93 |
bone marrow | 4.36e-16 | 76 |
bone element | 7.47e-15 | 82 |
connective tissue | 1.52e-14 | 371 |
skeletal element | 8.95e-14 | 90 |
skeletal system | 3.81e-12 | 100 |
cardiovascular system | 3.34e-11 | 109 |
musculoskeletal system | 1.64e-10 | 167 |
circulatory system | 2.85e-10 | 112 |
vasculature | 1.49e-08 | 78 |
vascular system | 1.49e-08 | 78 |
nephron epithelium | 7.50e-08 | 15 |
renal tubule | 7.50e-08 | 15 |
nephron tubule | 7.50e-08 | 15 |
nephron | 7.50e-08 | 15 |
uriniferous tubule | 7.50e-08 | 15 |
nephrogenic mesenchyme | 7.50e-08 | 15 |
epithelial tube | 1.12e-07 | 117 |
excretory tube | 1.58e-07 | 16 |
kidney epithelium | 1.58e-07 | 16 |
parenchyma | 4.38e-07 | 15 |
vessel | 8.63e-07 | 68 |