FFCP PHASE1:Hg19::chr6:80340958..80340983,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=83699 | |EntrezGene=83699 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15567 | |HGNC=15567 | ||
|TSSclassifier=strong | |||
|UniProt=Q9UJC5 | |UniProt=Q9UJC5 | ||
|association_with_transcript=-16bp_to_ENST00000369838,NM_031469,uc003piz.1_5end | |association_with_transcript=-16bp_to_ENST00000369838,NM_031469,uc003piz.1_5end | ||
|cluster_id=chr6:80340958..80340983,+ | |||
|description=CAGE_peak_3_at_SH3BGRL2_5end | |description=CAGE_peak_3_at_SH3BGRL2_5end | ||
|id=chr6:80340958..80340983,+ | |id=chr6:80340958..80340983,+ | ||
|ontology_enrichment_celltype=CL:0000066!3.29e-14!254;CL:0002139!9.16e-07!24 | |ontology_enrichment_celltype=CL:0000066!3.29e-14!254;CL:0002139!9.16e-07!24 | ||
|ontology_enrichment_celltype_v019=CL:0002139;3.37e-07;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,3.30e-11,253;CL:0002139,2.91e-07,24 | |||
|ontology_enrichment_development_v019=UBERON:0006601;4.79e-08;82 | |||
|ontology_enrichment_disease=DOID:305!1.05e-09!106;DOID:0050687!7.80e-09!143;DOID:299!1.89e-07!25 | |ontology_enrichment_disease=DOID:305!1.05e-09!106;DOID:0050687!7.80e-09!143;DOID:299!1.89e-07!25 | ||
|ontology_enrichment_disease_v019=DOID:299;5.57e-08;25 | |||
|ontology_enrichment_disease_v019_2=DOID:299,5.17e-08,25;DOID:305,6.23e-08,106 | |||
|ontology_enrichment_uberon=UBERON:0007023!4.22e-33!115;UBERON:0004111!7.08e-25!241;UBERON:0000477!2.56e-22!286;UBERON:0000025!2.48e-21!194;UBERON:0000481!8.15e-21!347;UBERON:0005743!9.19e-21!86;UBERON:0000073!9.31e-21!94;UBERON:0001016!9.31e-21!94;UBERON:0001049!3.37e-20!57;UBERON:0005068!3.37e-20!57;UBERON:0006241!3.37e-20!57;UBERON:0007135!3.37e-20!57;UBERON:0001017!4.96e-20!82;UBERON:0000483!7.07e-20!309;UBERON:0000119!7.40e-20!312;UBERON:0002346!2.39e-18!90;UBERON:0002616!4.43e-18!59;UBERON:0003075!5.13e-18!86;UBERON:0007284!5.13e-18!86;UBERON:0000955!2.70e-17!69;UBERON:0006238!2.70e-17!69;UBERON:0003080!6.63e-16!42;UBERON:0002780!1.88e-15!41;UBERON:0001890!1.88e-15!41;UBERON:0006240!1.88e-15!41;UBERON:0000924!4.23e-15!173;UBERON:0006601!4.23e-15!173;UBERON:0004121!1.16e-14!169;UBERON:0000064!3.21e-14!219;UBERON:0002020!7.02e-14!34;UBERON:0003528!7.02e-14!34;UBERON:0001869!7.88e-14!32;UBERON:0001893!9.77e-14!34;UBERON:0000033!1.23e-13!123;UBERON:0000475!1.41e-13!365;UBERON:0000153!2.16e-13!129;UBERON:0007811!2.16e-13!129;UBERON:0003056!2.93e-13!61;UBERON:0002791!3.78e-13!33;UBERON:0000922!7.10e-13!612;UBERON:0002619!1.87e-12!22;UBERON:0001007!4.30e-12!155;UBERON:0001555!4.30e-12!155;UBERON:0007026!4.30e-12!155;UBERON:0004119!4.58e-12!169;UBERON:0000925!4.58e-12!169;UBERON:0006595!4.58e-12!169;UBERON:0005177!6.83e-12!107;UBERON:0001950!8.39e-12!20;UBERON:0004921!8.45e-12!129;UBERON:0004185!8.45e-12!129;UBERON:0002050!9.81e-12!605;UBERON:0005423!9.81e-12!605;UBERON:0000468!1.41e-11!659;UBERON:0000923!1.78e-11!604;UBERON:0005291!1.78e-11!604;UBERON:0006598!1.78e-11!604;UBERON:0002532!1.78e-11!604;UBERON:0000466!1.89e-11!126;UBERON:0000956!4.47e-11!25;UBERON:0000203!4.47e-11!25;UBERON:0000480!1.81e-10!626;UBERON:0000467!2.16e-10!625;UBERON:0000464!4.09e-09!104;UBERON:0000077!5.69e-09!130;UBERON:0000062!1.22e-07!511;UBERON:0001041!2.45e-07!98;UBERON:0005911!2.48e-07!82;UBERON:0009569!4.16e-07!113 | |ontology_enrichment_uberon=UBERON:0007023!4.22e-33!115;UBERON:0004111!7.08e-25!241;UBERON:0000477!2.56e-22!286;UBERON:0000025!2.48e-21!194;UBERON:0000481!8.15e-21!347;UBERON:0005743!9.19e-21!86;UBERON:0000073!9.31e-21!94;UBERON:0001016!9.31e-21!94;UBERON:0001049!3.37e-20!57;UBERON:0005068!3.37e-20!57;UBERON:0006241!3.37e-20!57;UBERON:0007135!3.37e-20!57;UBERON:0001017!4.96e-20!82;UBERON:0000483!7.07e-20!309;UBERON:0000119!7.40e-20!312;UBERON:0002346!2.39e-18!90;UBERON:0002616!4.43e-18!59;UBERON:0003075!5.13e-18!86;UBERON:0007284!5.13e-18!86;UBERON:0000955!2.70e-17!69;UBERON:0006238!2.70e-17!69;UBERON:0003080!6.63e-16!42;UBERON:0002780!1.88e-15!41;UBERON:0001890!1.88e-15!41;UBERON:0006240!1.88e-15!41;UBERON:0000924!4.23e-15!173;UBERON:0006601!4.23e-15!173;UBERON:0004121!1.16e-14!169;UBERON:0000064!3.21e-14!219;UBERON:0002020!7.02e-14!34;UBERON:0003528!7.02e-14!34;UBERON:0001869!7.88e-14!32;UBERON:0001893!9.77e-14!34;UBERON:0000033!1.23e-13!123;UBERON:0000475!1.41e-13!365;UBERON:0000153!2.16e-13!129;UBERON:0007811!2.16e-13!129;UBERON:0003056!2.93e-13!61;UBERON:0002791!3.78e-13!33;UBERON:0000922!7.10e-13!612;UBERON:0002619!1.87e-12!22;UBERON:0001007!4.30e-12!155;UBERON:0001555!4.30e-12!155;UBERON:0007026!4.30e-12!155;UBERON:0004119!4.58e-12!169;UBERON:0000925!4.58e-12!169;UBERON:0006595!4.58e-12!169;UBERON:0005177!6.83e-12!107;UBERON:0001950!8.39e-12!20;UBERON:0004921!8.45e-12!129;UBERON:0004185!8.45e-12!129;UBERON:0002050!9.81e-12!605;UBERON:0005423!9.81e-12!605;UBERON:0000468!1.41e-11!659;UBERON:0000923!1.78e-11!604;UBERON:0005291!1.78e-11!604;UBERON:0006598!1.78e-11!604;UBERON:0002532!1.78e-11!604;UBERON:0000466!1.89e-11!126;UBERON:0000956!4.47e-11!25;UBERON:0000203!4.47e-11!25;UBERON:0000480!1.81e-10!626;UBERON:0000467!2.16e-10!625;UBERON:0000464!4.09e-09!104;UBERON:0000077!5.69e-09!130;UBERON:0000062!1.22e-07!511;UBERON:0001041!2.45e-07!98;UBERON:0005911!2.48e-07!82;UBERON:0009569!4.16e-07!113 | ||
|ontology_enrichment_uberon_v019=UBERON:0002619;1.74e-13;22!UBERON:0001869;7.98e-13;32!UBERON:0001950;1.03e-12;20!UBERON:0003528;1.63e-12;34!UBERON:0002020;1.63e-12;34!UBERON:0001893;2.64e-12;34!UBERON:0002791;2.80e-12;32!UBERON:0002780;7.14e-12;41!UBERON:0001890;7.14e-12;41!UBERON:0000956;4.04e-11;25!UBERON:0000203;4.04e-11;25!UBERON:0000073;1.41e-10;53!UBERON:0002616;1.41e-10;53!UBERON:0007023;9.27e-10;114!UBERON:0001017;2.02e-08;75!UBERON:0000955;4.35e-08;68!UBERON:0001016;2.35e-07;83!UBERON:0005409;6.37e-07;22 | |||
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| ||
|short_description=p3@SH3BGRL2 | |short_description=p3@SH3BGRL2 | ||
}} | }} |
Latest revision as of 22:36, 19 September 2015
Short description: | p3@SH3BGRL2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SH3BGRL2_5end |
Coexpression cluster: | NA |
Association with transcript: | -16bp_to_ENST00000369838, NM_031469, uc003piz.1_5end |
EntrezGene: | SH3BGRL2 |
HGNC: | 15567 |
UniProt: | Q9UJC5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 3.30e-11 | 253 |
endothelial cell of vascular tree | 2.91e-07 | 24 |
Ontology term | p-value | n |
---|---|---|
adenocarcinoma | 5.17e-08 | 25 |
carcinoma | 6.23e-08 | 106 |