FFCP PHASE1:Hg19::chr6:64515688..64515695,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr6:64515688..64515695,+ | |||
|description=CAGE_peak_at_chr6:64515688..64515695,+ | |description=CAGE_peak_at_chr6:64515688..64515695,+ | ||
|id=chr6:64515688..64515695,+ | |id=chr6:64515688..64515695,+ | ||
|ontology_enrichment_celltype=CL:0000860!1.74e-19!45;CL:0002057!2.65e-19!42;CL:0000766!4.28e-16!76;CL:0002009!1.39e-15!65;CL:0002194!1.74e-15!63;CL:0000576!1.74e-15!63;CL:0000040!1.74e-15!63;CL:0000559!1.74e-15!63;CL:0000557!2.98e-13!71;CL:0000839!9.10e-13!70;CL:0000763!1.39e-12!112;CL:0000049!1.39e-12!112;CL:0002393!3.49e-08!9;CL:0002397!3.49e-08!9 | |ontology_enrichment_celltype=CL:0000860!1.74e-19!45;CL:0002057!2.65e-19!42;CL:0000766!4.28e-16!76;CL:0002009!1.39e-15!65;CL:0002194!1.74e-15!63;CL:0000576!1.74e-15!63;CL:0000040!1.74e-15!63;CL:0000559!1.74e-15!63;CL:0000557!2.98e-13!71;CL:0000839!9.10e-13!70;CL:0000763!1.39e-12!112;CL:0000049!1.39e-12!112;CL:0002393!3.49e-08!9;CL:0002397!3.49e-08!9 | ||
|ontology_enrichment_celltype_v019=CL:0002583;1.18e-10;2!CL:0000094;1.99e-09;8!CL:0000766;1.07e-08;69!CL:0000576;5.76e-08;48!CL:0000775;2.66e-07;3!CL:0002582;5.16e-07;3!CL:0002393;6.22e-07;6!CL:0002397;6.22e-07;6!CL:0000081;7.37e-07;11!CL:0000875;7.93e-07;3!CL:0002396;7.93e-07;3!CL:0000860;9.08e-07;33!CL:0002057;9.08e-07;33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,3.54e-15,72;CL:0000473,1.63e-14,48;CL:0000234,1.63e-14,48;CL:0000860,1.74e-14,42;CL:0002057,1.74e-14,42;CL:0002393,1.53e-11,9;CL:0002397,1.53e-11,9;CL:0000763,2.16e-11,108;CL:0000049,2.16e-11,108;CL:0002194,5.19e-11,59;CL:0000576,5.19e-11,59;CL:0000040,5.19e-11,59;CL:0000559,5.19e-11,59;CL:0002583,1.22e-10,2;CL:0002009,1.47e-10,61;CL:0000839,1.49e-09,66;CL:0000094,2.11e-09,8;CL:0000557,2.27e-09,67;CL:0000775,2.59e-07,3;CL:0002582,3.72e-07,3;CL:0000875,6.76e-07,3;CL:0002396,6.76e-07,3;CL:0000081,7.68e-07,11 | |||
|ontology_enrichment_development_v019=CL:0002057;1.58e-08;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!9.08e-12!102;UBERON:0003061!9.08e-12!102;UBERON:0002193!1.74e-11!112;UBERON:0002371!1.78e-10!80;UBERON:0001474!5.46e-09!86;UBERON:0002405!1.62e-08!115;UBERON:0004765!2.70e-08!101;UBERON:0001434!2.70e-08!101 | |ontology_enrichment_uberon=UBERON:0002390!9.08e-12!102;UBERON:0003061!9.08e-12!102;UBERON:0002193!1.74e-11!112;UBERON:0002371!1.78e-10!80;UBERON:0001474!5.46e-09!86;UBERON:0002405!1.62e-08!115;UBERON:0004765!2.70e-08!101;UBERON:0001434!2.70e-08!101 | ||
|ontology_enrichment_uberon_v019=UBERON:0002072;3.60e-09;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002072,3.71e-09,5;UBERON:0002371,6.12e-08,76;UBERON:0002390,1.50e-07,98;UBERON:0003061,1.50e-07,98;UBERON:0004765,2.39e-07,90;UBERON:0001474,3.66e-07,82 | |||
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| ||
|short_description=p@chr6:64515688..64515695,+ | |short_description=p@chr6:64515688..64515695,+ | ||
}} | }} |
Latest revision as of 02:43, 31 July 2015
Short description: | p@chr6:64515688..64515695, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:64515688..64515695, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 3.54e-15 | 72 |
defensive cell | 1.63e-14 | 48 |
phagocyte | 1.63e-14 | 48 |
classical monocyte | 1.74e-14 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.74e-14 | 42 |
intermediate monocyte | 1.53e-11 | 9 |
CD14-positive, CD16-positive monocyte | 1.53e-11 | 9 |
myeloid cell | 2.16e-11 | 108 |
common myeloid progenitor | 2.16e-11 | 108 |
monopoietic cell | 5.19e-11 | 59 |
monocyte | 5.19e-11 | 59 |
monoblast | 5.19e-11 | 59 |
promonocyte | 5.19e-11 | 59 |
subcutaneous preadipocyte | 1.22e-10 | 2 |
macrophage dendritic cell progenitor | 1.47e-10 | 61 |
myeloid lineage restricted progenitor cell | 1.49e-09 | 66 |
granulocyte | 2.11e-09 | 8 |
granulocyte monocyte progenitor cell | 2.27e-09 | 67 |
neutrophil | 2.59e-07 | 3 |
visceral preadipocyte | 3.72e-07 | 3 |
non-classical monocyte | 6.76e-07 | 3 |
CD14-low, CD16-positive monocyte | 6.76e-07 | 3 |
blood cell | 7.68e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
hypodermis | 3.71e-09 | 5 |
bone marrow | 6.12e-08 | 76 |
hematopoietic system | 1.50e-07 | 98 |
blood island | 1.50e-07 | 98 |
skeletal element | 2.39e-07 | 90 |
bone element | 3.66e-07 | 82 |