FFCP PHASE1:Hg19::chr16:55525707..55525728,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr16:55525707..55525728,+
|short_description=p@chr16:55525707..55525728,+
|description=CAGE_peak_at_chr16:55525707..55525728,+
|association_with_transcript=NA
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr16:55525707..55525728,+ | |||
|coexpression_cluster_id=C351 | |||
|description=CAGE_peak_at_chr16:55525707..55525728,+ | |||
|id=chr16:55525707..55525728,+ | |||
|ontology_enrichment_celltype=CL:0000055!4.95e-33!180;CL:0000057!1.90e-17!75;CL:0000680!3.66e-17!57;CL:0000056!3.66e-17!57;CL:0000355!3.66e-17!57;CL:0000187!1.32e-15!54;CL:0000183!8.64e-15!59;CL:0000393!8.50e-14!60;CL:0000211!8.50e-14!60;CL:0000192!2.57e-13!42;CL:0000514!2.57e-13!42;CL:0000359!8.26e-12!32;CL:0000222!1.75e-11!119;CL:0000048!6.86e-10!430;CL:0002371!3.53e-09!591;CL:0000723!3.79e-09!436;CL:0000034!6.26e-09!444;CL:0000499!2.74e-08!27;CL:0000144!4.60e-08!625;CL:0002494!1.24e-07!16;CL:0002334!3.02e-07!12 | |||
|ontology_enrichment_celltype_v019=CL:0000359;5.39e-13;32!CL:0002539;6.52e-09;10!CL:0000192;1.54e-08;43!CL:0000134;1.54e-08;55!CL:0000499;2.88e-08;28!CL:0002334;4.29e-08;12!CL:0000048;2.45e-07;58!CL:1000306;3.64e-07;4!CL:0002547;3.64e-07;4!CL:0000135;4.35e-07;3!CL:0000388;4.35e-07;3!CL:0000569;4.63e-07;4!CL:0000153;5.32e-07;9!CL:0000447;5.32e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000048,1.15e-14,427;CL:0000723,4.10e-14,433;CL:0000034,2.10e-13,441;CL:0000359,2.93e-13,32;CL:0000057,8.90e-12,76;CL:0000192,5.07e-11,43;CL:0000514,5.07e-11,43;CL:0002539,6.18e-09,10;CL:0000680,1.13e-08,58;CL:0000056,1.13e-08,58;CL:0000355,1.13e-08,58;CL:0002320,1.49e-08,361;CL:0000187,2.05e-08,55;CL:0000134,3.71e-08,354;CL:0000499,3.72e-08,28;CL:0002334,4.02e-08,12;CL:0000136,6.01e-08,15;CL:1000306,3.06e-07,4;CL:0002547,3.06e-07,4;CL:0000135,4.48e-07,3;CL:0000388,4.48e-07,3;CL:0000569,4.48e-07,4;CL:0000011,4.48e-07,4;CL:0000393,4.60e-07,61;CL:0000211,4.60e-07,61;CL:0000153,6.85e-07,9;CL:0000447,6.85e-07,9 | |||
|ontology_enrichment_development_v019=CL:0000514;1.54e-08;43!CL:0000011;4.63e-07;4 | |||
|ontology_enrichment_disease=DOID:2394!3.36e-08!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;2.52e-08;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,1.48e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0004872!2.10e-22!84;UBERON:0002385!8.58e-18!63;UBERON:0001015!8.58e-18!63;UBERON:0000383!8.58e-18!63;UBERON:0001134!2.89e-17!61;UBERON:0002036!2.89e-17!61;UBERON:0003082!2.89e-17!61;UBERON:0001981!3.24e-17!60;UBERON:0007500!3.24e-17!60;UBERON:0004537!3.24e-17!60;UBERON:0006965!3.24e-17!60;UBERON:0001637!6.49e-17!42;UBERON:0003509!6.49e-17!42;UBERON:0004572!6.49e-17!42;UBERON:0004290!1.03e-16!70;UBERON:0000914!3.29e-16!83;UBERON:0002329!3.29e-16!83;UBERON:0003077!3.29e-16!83;UBERON:0003059!3.29e-16!83;UBERON:0007282!3.29e-16!83;UBERON:0009618!3.29e-16!83;UBERON:0007285!3.29e-16!83;UBERON:0002049!4.48e-16!79;UBERON:0007798!4.48e-16!79;UBERON:0004535!8.17e-16!110;UBERON:0001009!2.10e-15!113;UBERON:0000486!6.60e-15!82;UBERON:0003914!3.69e-14!118;UBERON:0004573!7.49e-14!33;UBERON:0004571!7.49e-14!33;UBERON:0000055!1.36e-13!69;UBERON:0000490!1.48e-12!138;UBERON:0005256!2.51e-11!143;UBERON:0000948!3.78e-10!24;UBERON:0005498!3.78e-10!24;UBERON:0004140!3.78e-10!24;UBERON:0009881!3.78e-10!24;UBERON:0004141!3.78e-10!24;UBERON:0003084!3.78e-10!24;UBERON:0007005!3.78e-10!24;UBERON:0004139!3.78e-10!24;UBERON:0004291!3.78e-10!24;UBERON:0000947!7.98e-10!21;UBERON:0010191!7.98e-10!21;UBERON:0007100!4.17e-09!27;UBERON:0000926!2.43e-07!448;UBERON:0004120!2.43e-07!448;UBERON:0006603!2.43e-07!448;UBERON:0001135!2.50e-07!15;UBERON:0002100!7.89e-07!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;2.60e-12;33!UBERON:0004571;2.60e-12;33!UBERON:0001637;7.97e-10;42!UBERON:0003509;7.97e-10;42!UBERON:0004572;7.97e-10;42!UBERON:0004237;6.52e-09;10!UBERON:0004695;6.52e-09;10!UBERON:0002111;6.52e-09;10!UBERON:0004178;6.52e-09;10!UBERON:0000947;1.80e-08;21!UBERON:0010191;1.80e-08;21!UBERON:0007500;2.17e-07;56!UBERON:0001981;2.17e-07;56!UBERON:0004537;2.17e-07;56!UBERON:0004797;3.64e-07;4!UBERON:0000415;3.64e-07;4!UBERON:0007240;3.64e-07;4!UBERON:0005742;3.64e-07;4!UBERON:0005734;3.64e-07;4!UBERON:0004664;3.64e-07;4!UBERON:0004663;3.64e-07;4!UBERON:0007846;4.35e-07;3!UBERON:0000043;4.35e-07;3!UBERON:0007845;4.35e-07;3!UBERON:0004457;7.09e-07;9!UBERON:0000042;7.09e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004872,4.93e-15,83;UBERON:0001637,2.17e-14,42;UBERON:0003509,2.17e-14,42;UBERON:0004572,2.17e-14,42;UBERON:0004573,5.12e-13,33;UBERON:0004571,5.12e-13,33;UBERON:0007500,1.60e-12,59;UBERON:0001981,1.60e-12,59;UBERON:0004537,1.60e-12,59;UBERON:0006965,1.60e-12,59;UBERON:0003914,9.46e-11,117;UBERON:0000926,3.50e-10,315;UBERON:0004120,3.50e-10,315;UBERON:0006603,3.50e-10,315;UBERON:0007524,5.19e-10,73;UBERON:0000055,6.42e-10,68;UBERON:0001134,1.22e-09,62;UBERON:0002036,1.22e-09,62;UBERON:0003082,1.22e-09,62;UBERON:0002329,1.78e-09,71;UBERON:0003059,1.78e-09,71;UBERON:0007282,1.78e-09,71;UBERON:0004290,1.78e-09,71;UBERON:0009618,1.78e-09,71;UBERON:0003077,3.01e-09,72;UBERON:0007285,3.01e-09,72;UBERON:0002384,3.67e-09,371;UBERON:0004535,3.79e-09,109;UBERON:0002385,3.88e-09,64;UBERON:0001015,3.88e-09,64;UBERON:0000383,3.88e-09,64;UBERON:0004237,6.18e-09,10;UBERON:0004695,6.18e-09,10;UBERON:0002111,6.18e-09,10;UBERON:0004178,6.18e-09,10;UBERON:0000486,6.33e-09,83;UBERON:0007503,6.97e-09,78;UBERON:0001009,1.15e-08,112;UBERON:0000947,1.60e-08,21;UBERON:0010191,1.60e-08,21;UBERON:0002049,1.65e-08,78;UBERON:0007798,1.65e-08,78;UBERON:0005256,4.41e-08,122;UBERON:0000415,3.06e-07,4;UBERON:0007240,3.06e-07,4;UBERON:0005742,3.06e-07,4;UBERON:0005734,3.06e-07,4;UBERON:0004664,3.06e-07,4;UBERON:0004663,3.06e-07,4;UBERON:0007846,4.48e-07,3;UBERON:0000043,4.48e-07,3;UBERON:0007845,4.48e-07,3 | |||
|phase1_expression=1.63510541343501,5.78071414505655,0.845726424575827,3.00219895059391,3.12872766099101,1.74467704820074,0,2.52687949370732,4.17897005119742,0,0,0,0.263766978228454,0.37129905888014,0.331397375727916,6.05092631806598,7.8350288643117,5.84248072309899,11.2224543721817,0.246242116153576,1.22400414746552,0.313454721478088,0,0.273748850145768,0.125542639594803,0,0,0,0,0,0,0.919421224478927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0.670700859703636,0.12786256184353,0.361439152384566,1.00267582127178,3.33146993609895,2.3858578411533,6.8128881842369,0.283604451492204,0.221729397462564,0.702678285545008,0.130979075497713,0,0,0,0,0,0,0,0,0.198762407366705,0.860234595106124,0.694281003215189,0.56530794192401,0,1.6507082516404,0.626984899610432,0,0,0,1.20848795132744,0,2.68468263302986,0,0.81014194788176,0,0,0,1.53316637465883,0,0.549605231791222,0,0,0,1.98788780678127,1.51956613997496,1.32409180813219,7.45775213946916,3.54668382198357,0.560677600142307,2.1349799145941,1.2333377420858,0.311211035399766,0.269421344139376,0.163461903113459,0.302714855289863,0.576175924479999,0,0.936480230490962,0,1.94283284717341,0.469737994575059,0,0,0.408308342509787,0.368502951935304,0.516628905878827,2.37600571456411,6.18167323196392,0,0.718618141816238,0,0,0,0.438977620880838,3.37136575378922,3.45547535485173,0.453728732640084,1.61450672119976,1.49490172172997,0.423863802319124,1.50045548042201,0.515262646192195,0.515281080091258,0.744467425326359,0.675105328965065,0.389748020644795,1.00973509697646,0.736399189138395,0.80823028409406,2.84007674013291,0.201504196455281,0,0,0,0,0.121973706129595,0,0.116193942869518,0.10366105501537,0,0,0,10.2918550110862,0,4.64367928031979,0,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0,2.94017422771084,0,0,0,0,0,0.343135620597051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.514137463516618,0,0.857479297891735,0,0.43596006883328,0,1.03417372606222,0,0,1.32969058292435,2.08014873822732,0,0,0,0.714889968290738,1.08524321078289,0,0.65147236858747,0,0,0.301439377059586,0,0.199945982364114,0,0,0,0,1.14861935834114,0,0.723906533337896,3.08214483825575,0.895304816199478,0,0,0,0,0,0,0,0,0,0,0,0,0.613457458595699,1.00034104211935,0,1.03985430765404,9.27830741745241,1.73472656537328,1.28855556491985,0.601892199455438,0,3.10419213877515,0,1.10621501125022,0.781952530212746,0.195801157462741,3.0882908142977,0,0,0,0,0,0.30239029332968,1.48864684691266,0.920771839728375,7.57782254969299,1.28139149255701,0.511707249066704,2.2519548960105,0,4.00945203886904,3.01854933032316,0.164254312027618,5.71179872101983,1.97557643381931,0,1.80455823272956,0,0.918515585316854,4.55227920016793,3.14698595902618,0,0,0,0,0.105551628892876,0,0,0.215915916102139,3.08454505380579,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0.0915694648183434,0,0,0.650060246036521,1.6068392984416,0.193341436584244,0.154048617114644,0.460511024178389,0.137836572484531,0.107420244868274,0.870100163485371,0.340906509664404,0.0890320356467374,0,0,0,0,4.18360994367557,5.03699754929024,2.7881490806424,0.616067160352178,0,0,1.29726953372744,0.286249773483982,0,0.632758849437452,1.14378116354295,0.255897791311334,1.28381696410176,0.318203247925937,1.56989728039846,0.359744915166629,0.823611089208164,0.589062011728432,0.808729926293264,0,1.26377536871694,0,4.38684281336312,3.16950440270266,0.136499911407986,6.08043357400965,3.39024349860728,0,6.6343897524122,1.75380354101505,0.578775534266688,0,0.202910376962704,1.8589409885985,0.563391205064483,0.143411352204052,0,1.426684205925,0.354761064070598,9.28873595309722,11.1960263606367,0,0.699869440489966,0,0,0,0.0941438007767792,0.43050537267123,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199579371432817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.586032717087576,0,0,0,0,0,0,0,0,0.222617410045812,0,0,0.398495976502139,0,0,0.409074730008619,0,0.311039587661807,0,0,0,0.197286811273867,0,1.11136990144637,0,0,0,0,0,0,0.227586896570999,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230850775511391,0.683652335082007,0,0.0897576444097721,0,0,0.549585560411174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,2.40773294189637,0,0,0,0,0.394584402849391,0,0,0.379119477770928,0,0,0,0,0,0,0,0.277349346026277,0,0,0,1.04836000945218,0.171986032471617,0,0,0,0,0,0.90392296312213,0.137041924646751,0,0,0,0.160317640503067,0.213452994739353,0.19980960958213,0,0,0,0,0,0,0,0,0.611989305817931,0,0,0,0,0.859530882839914,0,0.837847203816763,0.687481272035051,0.717873024576814,0,0.429226048136571,0,0,1.08089965062721,0,0,0,0,0,0,0,0,0.160753148465019,0.137539436597234,0,0,0,0,0,0,0,0,0,0,1.42939065274673,0.662091970365432,0,1.62899880526114,0.864221491201268,5.87857248196936,0,0,1.19271615249795,0,0,0,0,0,0,0,0.213574825135389,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285465333544967,0,0,0,1.19403842309499,3.27198633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| ||
|short_description=p@chr16:55525707..55525728,+ | |||
}} | }} |
Latest revision as of 09:52, 25 July 2015
Short description: | p@chr16:55525707..55525728, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:55525707..55525728, + |
Coexpression cluster: | C351_Fibroblast_Smooth_mesenchymal_Adipocyte_tenocyte_Synoviocyte_Hair |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi fate stem cell | 1.15e-14 | 427 |
somatic stem cell | 4.10e-14 | 433 |
stem cell | 2.10e-13 | 441 |
vascular associated smooth muscle cell | 2.93e-13 | 32 |
fibroblast | 8.90e-12 | 76 |
smooth muscle cell | 5.07e-11 | 43 |
smooth muscle myoblast | 5.07e-11 | 43 |
aortic smooth muscle cell | 6.18e-09 | 10 |
muscle precursor cell | 1.13e-08 | 58 |
myoblast | 1.13e-08 | 58 |
multi-potent skeletal muscle stem cell | 1.13e-08 | 58 |
connective tissue cell | 1.49e-08 | 361 |
muscle cell | 2.05e-08 | 55 |
mesenchymal cell | 3.71e-08 | 354 |
stromal cell | 3.72e-08 | 28 |
preadipocyte | 4.02e-08 | 12 |
fat cell | 6.01e-08 | 15 |
fibroblast of tunica adventitia of artery | 3.06e-07 | 4 |
fibroblast of the aortic adventitia | 3.06e-07 | 4 |
fibrocyte | 4.48e-07 | 3 |
tendon cell | 4.48e-07 | 3 |
cardiac mesenchymal cell | 4.48e-07 | 4 |
migratory trunk neural crest cell | 4.48e-07 | 4 |
electrically responsive cell | 4.60e-07 | 61 |
electrically active cell | 4.60e-07 | 61 |
GAG secreting cell | 6.85e-07 | 9 |
carbohydrate secreting cell | 6.85e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 1.48e-08 | 14 |