FFCP PHASE1:Hg19::chr6:33041605..33041651,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3113 | |EntrezGene=3113 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4938 | |HGNC=4938 | ||
|TSSclassifier=strong | |||
|UniProt=P20036 | |UniProt=P20036 | ||
|association_with_transcript=-56bp_to_uc003ocs.1,uc010juk.2_5end | |association_with_transcript=-56bp_to_uc003ocs.1,uc010juk.2_5end | ||
|cluster_id=chr6:33041605..33041651,- | |||
|coexpression_cluster_id=C80 | |||
|description=CAGE_peak_9_at_HLA-DPA1_5end | |description=CAGE_peak_9_at_HLA-DPA1_5end | ||
|id=chr6:33041605..33041651,- | |id=chr6:33041605..33041651,- | ||
|ontology_enrichment_celltype=CL:0000738!1.35e-62!140;CL:0002031!1.73e-52!124;CL:0002087!4.40e-52!119;CL:0000037!3.54e-48!172;CL:0000566!3.54e-48!172;CL:0002032!3.48e-47!165;CL:0000837!3.48e-47!165;CL:0000988!2.22e-46!182;CL:0002057!5.11e-37!42;CL:0000860!4.76e-34!45;CL:0002009!6.08e-34!65;CL:0000557!9.76e-33!71;CL:0000766!8.63e-32!76;CL:0002194!4.05e-30!63;CL:0000576!4.05e-30!63;CL:0000040!4.05e-30!63;CL:0000559!4.05e-30!63;CL:0000839!1.53e-28!70;CL:0000763!6.96e-27!112;CL:0000049!6.96e-27!112;CL:0000945!5.17e-25!24;CL:0000826!5.17e-25!24;CL:0000990!6.59e-20!8;CL:0000838!8.52e-19!52;CL:0000236!1.27e-18!14;CL:0000542!2.49e-18!53;CL:0000051!2.49e-18!53;CL:0000451!5.42e-16!10;CL:0000453!1.48e-15!5;CL:0000134!2.61e-15!358;CL:0002320!9.95e-15!365;CL:0000219!1.10e-12!390;CL:0000840!6.63e-12!5;CL:0001029!6.63e-12!5;CL:0000048!5.87e-11!430;CL:0000723!1.33e-10!436;CL:0000034!3.85e-10!444;CL:0000767!8.53e-09!3;CL:0002393!2.20e-07!9;CL:0002397!2.20e-07!9;CL:0001014!2.72e-07!2;CL:0001016!2.72e-07!2 | |ontology_enrichment_celltype=CL:0000738!1.35e-62!140;CL:0002031!1.73e-52!124;CL:0002087!4.40e-52!119;CL:0000037!3.54e-48!172;CL:0000566!3.54e-48!172;CL:0002032!3.48e-47!165;CL:0000837!3.48e-47!165;CL:0000988!2.22e-46!182;CL:0002057!5.11e-37!42;CL:0000860!4.76e-34!45;CL:0002009!6.08e-34!65;CL:0000557!9.76e-33!71;CL:0000766!8.63e-32!76;CL:0002194!4.05e-30!63;CL:0000576!4.05e-30!63;CL:0000040!4.05e-30!63;CL:0000559!4.05e-30!63;CL:0000839!1.53e-28!70;CL:0000763!6.96e-27!112;CL:0000049!6.96e-27!112;CL:0000945!5.17e-25!24;CL:0000826!5.17e-25!24;CL:0000990!6.59e-20!8;CL:0000838!8.52e-19!52;CL:0000236!1.27e-18!14;CL:0000542!2.49e-18!53;CL:0000051!2.49e-18!53;CL:0000451!5.42e-16!10;CL:0000453!1.48e-15!5;CL:0000134!2.61e-15!358;CL:0002320!9.95e-15!365;CL:0000219!1.10e-12!390;CL:0000840!6.63e-12!5;CL:0001029!6.63e-12!5;CL:0000048!5.87e-11!430;CL:0000723!1.33e-10!436;CL:0000034!3.85e-10!444;CL:0000767!8.53e-09!3;CL:0002393!2.20e-07!9;CL:0002397!2.20e-07!9;CL:0001014!2.72e-07!2;CL:0001016!2.72e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:0000453;5.44e-83;5!CL:0000990;2.82e-46;8!CL:0000451;6.42e-38;10!CL:0001014;1.11e-34;2!CL:0001016;1.11e-34;2!CL:0000840;2.91e-12;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000453,5.45e-83,5;CL:0000990,2.82e-46,8;CL:0000451,6.43e-38,10;CL:0001014,1.11e-34,2;CL:0001016,1.11e-34,2;CL:0000738,8.94e-14,136;CL:0000840,2.91e-12,5;CL:0001029,2.91e-12,5;CL:0000763,1.25e-11,108;CL:0000049,1.25e-11,108;CL:0002032,1.64e-11,161;CL:0000837,1.64e-11,161;CL:0000037,5.38e-11,168;CL:0000988,2.16e-10,177;CL:0000557,1.38e-08,67;CL:0002031,3.52e-08,120 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.09e-31!102;UBERON:0003061!2.09e-31!102;UBERON:0002193!2.01e-29!112;UBERON:0002371!4.64e-28!80;UBERON:0001474!1.74e-25!86;UBERON:0002405!2.92e-22!115;UBERON:0004765!2.14e-20!101;UBERON:0001434!2.14e-20!101;UBERON:0002384!1.07e-14!375;UBERON:0003081!3.36e-10!216;UBERON:0002204!4.85e-09!167 | |ontology_enrichment_uberon=UBERON:0002390!2.09e-31!102;UBERON:0003061!2.09e-31!102;UBERON:0002193!2.01e-29!112;UBERON:0002371!4.64e-28!80;UBERON:0001474!1.74e-25!86;UBERON:0002405!2.92e-22!115;UBERON:0004765!2.14e-20!101;UBERON:0001434!2.14e-20!101;UBERON:0002384!1.07e-14!375;UBERON:0003081!3.36e-10!216;UBERON:0002204!4.85e-09!167 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.49e-07,76;UBERON:0001474,5.50e-07,82 | |||
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| ||
|short_description=p9@HLA-DPA1 | |short_description=p9@HLA-DPA1 | ||
}} | }} |
Latest revision as of 05:33, 18 September 2015
Short description: | p9@HLA-DPA1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_HLA-DPA1_5end |
Coexpression cluster: | C80_immature_migratory_CD14_Dendritic_splenic_cord_Mast |
Association with transcript: | -56bp_to_uc003ocs.1, uc010juk.2_5end |
EntrezGene: | HLA-DPA1 |
HGNC: | 4938 |
UniProt: | P20036 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Langerhans cell | 5.45e-83 | 5 |
conventional dendritic cell | 2.82e-46 | 8 |
dendritic cell | 6.43e-38 | 10 |
CD1a-positive Langerhans cell | 1.11e-34 | 2 |
immature CD1a-positive Langerhans cell | 1.11e-34 | 2 |
leukocyte | 8.94e-14 | 136 |
immature conventional dendritic cell | 2.91e-12 | 5 |
common dendritic progenitor | 2.91e-12 | 5 |
myeloid cell | 1.25e-11 | 108 |
common myeloid progenitor | 1.25e-11 | 108 |
hematopoietic oligopotent progenitor cell | 1.64e-11 | 161 |
hematopoietic multipotent progenitor cell | 1.64e-11 | 161 |
hematopoietic stem cell | 5.38e-11 | 168 |
hematopoietic cell | 2.16e-10 | 177 |
granulocyte monocyte progenitor cell | 1.38e-08 | 67 |
hematopoietic lineage restricted progenitor cell | 3.52e-08 | 120 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.49e-07 | 76 |
bone element | 5.50e-07 | 82 |