FFCP PHASE1:Hg19::chr6:32812373..32812416,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5696 | |EntrezGene=5696 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9545 | |HGNC=9545 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=11bp_to_ENST00000484003_5end | |association_with_transcript=11bp_to_ENST00000484003_5end | ||
|cluster_id=chr6:32812373..32812416,- | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_4_at_PSMB8_5end | |description=CAGE_peak_4_at_PSMB8_5end | ||
|id=chr6:32812373..32812416,- | |id=chr6:32812373..32812416,- | ||
|ontology_enrichment_celltype=CL:0000738!3.41e-43!140;CL:0002087!8.29e-41!119;CL:0002031!1.98e-34!124;CL:0000037!2.66e-31!172;CL:0000566!2.66e-31!172;CL:0000988!2.52e-30!182;CL:0002032!1.86e-28!165;CL:0000837!1.86e-28!165;CL:0000542!7.99e-26!53;CL:0000051!7.99e-26!53;CL:0000838!1.75e-25!52;CL:0000860!6.14e-22!45;CL:0002057!7.91e-21!42;CL:0000766!3.74e-16!76;CL:0002009!2.92e-14!65;CL:0002194!2.97e-14!63;CL:0000576!2.97e-14!63;CL:0000040!2.97e-14!63;CL:0000559!2.97e-14!63;CL:0000557!2.20e-12!71;CL:0000084!2.22e-12!25;CL:0000827!2.22e-12!25;CL:0000945!2.23e-12!24;CL:0000826!2.23e-12!24;CL:0000839!3.07e-11!70;CL:0000791!1.80e-10!18;CL:0000789!1.80e-10!18;CL:0002420!1.80e-10!18;CL:0002419!1.80e-10!18;CL:0000790!1.80e-10!18;CL:0000236!8.62e-09!14;CL:0000763!2.53e-08!112;CL:0000049!2.53e-08!112;CL:0000134!4.93e-08!358;CL:0002320!1.50e-07!365;CL:0000625!6.55e-07!11 | |ontology_enrichment_celltype=CL:0000738!3.41e-43!140;CL:0002087!8.29e-41!119;CL:0002031!1.98e-34!124;CL:0000037!2.66e-31!172;CL:0000566!2.66e-31!172;CL:0000988!2.52e-30!182;CL:0002032!1.86e-28!165;CL:0000837!1.86e-28!165;CL:0000542!7.99e-26!53;CL:0000051!7.99e-26!53;CL:0000838!1.75e-25!52;CL:0000860!6.14e-22!45;CL:0002057!7.91e-21!42;CL:0000766!3.74e-16!76;CL:0002009!2.92e-14!65;CL:0002194!2.97e-14!63;CL:0000576!2.97e-14!63;CL:0000040!2.97e-14!63;CL:0000559!2.97e-14!63;CL:0000557!2.20e-12!71;CL:0000084!2.22e-12!25;CL:0000827!2.22e-12!25;CL:0000945!2.23e-12!24;CL:0000826!2.23e-12!24;CL:0000839!3.07e-11!70;CL:0000791!1.80e-10!18;CL:0000789!1.80e-10!18;CL:0002420!1.80e-10!18;CL:0002419!1.80e-10!18;CL:0000790!1.80e-10!18;CL:0000236!8.62e-09!14;CL:0000763!2.53e-08!112;CL:0000049!2.53e-08!112;CL:0000134!4.93e-08!358;CL:0002320!1.50e-07!365;CL:0000625!6.55e-07!11 | ||
|ontology_enrichment_celltype_v019=CL:0000860;3.31e-17;33!CL:0002057;3.31e-17;33!CL:0000542;2.32e-16;53!CL:0002087;2.14e-14;104!CL:0000084;1.95e-13;25!CL:0000945;2.26e-13;24!CL:0000576;6.10e-12;48!CL:0000791;2.30e-11;18!CL:0000789;2.30e-11;18!CL:0002419;2.30e-11;18!CL:0000473;5.09e-11;39!CL:0000234;5.09e-11;39!CL:0000738;1.07e-09;136!CL:0000236;4.31e-09;13!CL:0000766;2.06e-08;69!CL:0000625;1.89e-07;11!CL:0000988;2.56e-07;177!CL:0000094;7.97e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.14e-44,136;CL:0002087,8.06e-43,115;CL:0002031,2.29e-35,120;CL:0000037,7.26e-33,168;CL:0000988,1.21e-31,177;CL:0002032,8.53e-30,161;CL:0000837,8.53e-30,161;CL:0000542,5.17e-28,53;CL:0000051,5.17e-28,53;CL:0000838,1.22e-27,52;CL:0000860,1.46e-22,42;CL:0002057,1.46e-22,42;CL:0000473,1.15e-17,48;CL:0000234,1.15e-17,48;CL:0000766,5.58e-16,72;CL:0002194,4.01e-14,59;CL:0000576,4.01e-14,59;CL:0000040,4.01e-14,59;CL:0000559,4.01e-14,59;CL:0002009,6.35e-14,61;CL:0000084,2.36e-13,25;CL:0000827,2.36e-13,25;CL:0000945,2.38e-13,24;CL:0000826,2.38e-13,24;CL:0000557,8.64e-12,67;CL:0000791,2.85e-11,18;CL:0000789,2.85e-11,18;CL:0002420,2.85e-11,18;CL:0002419,2.85e-11,18;CL:0000790,2.85e-11,18;CL:0000839,9.51e-11,66;CL:0000236,1.93e-09,14;CL:0000763,3.40e-08,108;CL:0000049,3.40e-08,108;CL:0000134,9.81e-08,354;CL:0000625,2.15e-07,11;CL:0002320,3.93e-07,361;CL:0000094,9.01e-07,8 | |||
|ontology_enrichment_development_v019=CL:0002057;1.25e-16;42!CL:0000051;2.32e-16;53!CL:0000790;2.30e-11;18 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!5.44e-20!102;UBERON:0003061!5.44e-20!102;UBERON:0002193!3.46e-17!112;UBERON:0002371!5.68e-12!80;UBERON:0002405!9.86e-11!115;UBERON:0001474!7.07e-10!86;UBERON:0000178!1.45e-08!15;UBERON:0000179!1.45e-08!15;UBERON:0000463!1.45e-08!15;UBERON:0002384!1.41e-07!375;UBERON:0004765!3.92e-07!101;UBERON:0001434!3.92e-07!101 | |ontology_enrichment_uberon=UBERON:0002390!5.44e-20!102;UBERON:0003061!5.44e-20!102;UBERON:0002193!3.46e-17!112;UBERON:0002371!5.68e-12!80;UBERON:0002405!9.86e-11!115;UBERON:0001474!7.07e-10!86;UBERON:0000178!1.45e-08!15;UBERON:0000179!1.45e-08!15;UBERON:0000463!1.45e-08!15;UBERON:0002384!1.41e-07!375;UBERON:0004765!3.92e-07!101;UBERON:0001434!3.92e-07!101 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;3.19e-09;15!UBERON:0000179;3.19e-09;15!UBERON:0000463;3.19e-09;15!UBERON:0002390;2.47e-08;32 | |||
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| ||
|short_description=p4@PSMB8 | |short_description=p4@PSMB8 | ||
}} | }} |
Latest revision as of 04:12, 18 September 2015
Short description: | p4@PSMB8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_PSMB8_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | 11bp_to_ENST00000484003_5end |
EntrezGene: | PSMB8 |
HGNC: | 9545 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 3.36e-20 | 98 |
blood island | 3.36e-20 | 98 |
hemolymphoid system | 3.25e-17 | 108 |
bone marrow | 1.24e-11 | 76 |
immune system | 4.44e-11 | 93 |
bone element | 5.81e-10 | 82 |
blood | 3.40e-09 | 15 |
haemolymphatic fluid | 3.40e-09 | 15 |
organism substance | 3.40e-09 | 15 |
skeletal element | 4.11e-08 | 90 |
connective tissue | 2.83e-07 | 371 |