FFCP PHASE1:Hg19::chr6:32632755..32632783,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3119 | |EntrezGene=3119 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=4944 | |HGNC=4944 | ||
|TSSclassifier=strong | |||
|UniProt=Q29969 | |UniProt=Q29969 | ||
|association_with_transcript=-56bp_to_M57650_5end | |association_with_transcript=-56bp_to_M57650_5end | ||
|cluster_id=chr6:32632755..32632783,- | |||
|coexpression_cluster_id=C120 | |||
|description=CAGE_peak_5_at_HLA-DQB1_5end | |description=CAGE_peak_5_at_HLA-DQB1_5end | ||
|id=chr6:32632755..32632783,- | |id=chr6:32632755..32632783,- | ||
|ontology_enrichment_celltype=CL:0000738!1.14e-72!140;CL:0002087!1.16e-69!119;CL:0002031!1.71e-64!124;CL:0000037!5.59e-53!172;CL:0000566!5.59e-53!172;CL:0000988!1.02e-52!182;CL:0002009!4.86e-50!65;CL:0002032!1.56e-49!165;CL:0000837!1.56e-49!165;CL:0002057!2.98e-49!42;CL:0002194!2.90e-47!63;CL:0000576!2.90e-47!63;CL:0000040!2.90e-47!63;CL:0000559!2.90e-47!63;CL:0000557!4.45e-46!71;CL:0000860!7.02e-45!45;CL:0000839!1.62e-42!70;CL:0000766!4.19e-41!76;CL:0000763!2.66e-28!112;CL:0000049!2.66e-28!112;CL:0000542!4.75e-19!53;CL:0000051!4.75e-19!53;CL:0000838!3.46e-18!52;CL:0000945!1.40e-15!24;CL:0000826!1.40e-15!24;CL:0000451!3.83e-14!10;CL:0000134!6.99e-14!358;CL:0002320!4.63e-13!365;CL:0000236!1.20e-12!14;CL:0000990!1.85e-12!8;CL:0000219!4.25e-11!390;CL:0002393!5.48e-10!9;CL:0002397!5.48e-10!9;CL:0000840!8.20e-09!5;CL:0001029!8.20e-09!5;CL:0000453!4.29e-08!5;CL:0000080!7.89e-08!6;CL:0000034!9.69e-08!444;CL:0000048!9.92e-08!430;CL:0000723!2.83e-07!436 | |ontology_enrichment_celltype=CL:0000738!1.14e-72!140;CL:0002087!1.16e-69!119;CL:0002031!1.71e-64!124;CL:0000037!5.59e-53!172;CL:0000566!5.59e-53!172;CL:0000988!1.02e-52!182;CL:0002009!4.86e-50!65;CL:0002032!1.56e-49!165;CL:0000837!1.56e-49!165;CL:0002057!2.98e-49!42;CL:0002194!2.90e-47!63;CL:0000576!2.90e-47!63;CL:0000040!2.90e-47!63;CL:0000559!2.90e-47!63;CL:0000557!4.45e-46!71;CL:0000860!7.02e-45!45;CL:0000839!1.62e-42!70;CL:0000766!4.19e-41!76;CL:0000763!2.66e-28!112;CL:0000049!2.66e-28!112;CL:0000542!4.75e-19!53;CL:0000051!4.75e-19!53;CL:0000838!3.46e-18!52;CL:0000945!1.40e-15!24;CL:0000826!1.40e-15!24;CL:0000451!3.83e-14!10;CL:0000134!6.99e-14!358;CL:0002320!4.63e-13!365;CL:0000236!1.20e-12!14;CL:0000990!1.85e-12!8;CL:0000219!4.25e-11!390;CL:0002393!5.48e-10!9;CL:0002397!5.48e-10!9;CL:0000840!8.20e-09!5;CL:0001029!8.20e-09!5;CL:0000453!4.29e-08!5;CL:0000080!7.89e-08!6;CL:0000034!9.69e-08!444;CL:0000048!9.92e-08!430;CL:0000723!2.83e-07!436 | ||
|ontology_enrichment_celltype_v019=CL:0000860;6.18e-60;33!CL:0002057;6.18e-60;33!CL:0000576;1.34e-49;48!CL:0000473;3.44e-45;39!CL:0000234;3.44e-45;39!CL:0000766;3.01e-27;69!CL:0002087;1.63e-21;104!CL:0002393;5.72e-20;6!CL:0002397;5.72e-20;6!CL:0000990;2.96e-17;8!CL:0000738;8.14e-16;136!CL:0000451;6.42e-14;10!CL:0000840;1.57e-13;5!CL:0000945;9.36e-12;24!CL:0000453;1.23e-11;5!CL:0000763;1.63e-11;100!CL:0000236;1.73e-11;13!CL:0000988;2.16e-10;177!CL:0001014;2.45e-08;2!CL:0001016;2.45e-08;2!CL:0000219;9.38e-08;193 | |||
|ontology_enrichment_celltype_v019_2=CL:0002009,1.03e-81,61;CL:0000860,1.82e-80,42;CL:0002057,1.82e-80,42;CL:0002194,1.09e-75,59;CL:0000576,1.09e-75,59;CL:0000040,1.09e-75,59;CL:0000559,1.09e-75,59;CL:0000557,1.49e-73,67;CL:0000473,1.86e-73,48;CL:0000234,1.86e-73,48;CL:0002031,5.13e-69,120;CL:0000839,1.07e-66,66;CL:0002087,3.13e-66,115;CL:0000738,6.27e-65,136;CL:0000766,2.29e-60,72;CL:0000988,3.32e-53,177;CL:0002032,5.83e-53,161;CL:0000837,5.83e-53,161;CL:0000037,3.04e-50,168;CL:0000763,7.12e-47,108;CL:0000049,7.12e-47,108;CL:0000134,3.35e-18,354;CL:0002320,1.34e-17,361;CL:0000990,1.48e-17,8;CL:0002393,2.04e-17,9;CL:0002397,2.04e-17,9;CL:0000219,1.76e-15,386;CL:0000451,3.66e-14,10;CL:0000236,5.15e-14,14;CL:0000840,8.92e-14,5;CL:0001029,8.92e-14,5;CL:0000048,6.88e-13,427;CL:0000723,1.57e-12,433;CL:0000034,4.54e-12,441;CL:0000453,1.03e-11,5;CL:0000945,1.04e-11,24;CL:0000826,1.04e-11,24;CL:0001014,2.46e-08,2;CL:0001016,2.46e-08,2;CL:0000838,1.42e-07,52;CL:0000542,2.22e-07,53;CL:0000051,2.22e-07,53 | |||
|ontology_enrichment_development_v019=CL:0002057;1.72e-59;42!CL:0000049;6.79e-12;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!3.57e-49!102;UBERON:0003061!3.57e-49!102;UBERON:0002193!5.91e-44!112;UBERON:0002371!3.78e-40!80;UBERON:0001474!5.88e-36!86;UBERON:0002405!2.16e-29!115;UBERON:0004765!1.02e-27!101;UBERON:0001434!1.02e-27!101;UBERON:0003081!7.09e-15!216;UBERON:0002384!5.94e-12!375;UBERON:0002204!1.43e-11!167 | |ontology_enrichment_uberon=UBERON:0002390!3.57e-49!102;UBERON:0003061!3.57e-49!102;UBERON:0002193!5.91e-44!112;UBERON:0002371!3.78e-40!80;UBERON:0001474!5.88e-36!86;UBERON:0002405!2.16e-29!115;UBERON:0004765!1.02e-27!101;UBERON:0001434!1.02e-27!101;UBERON:0003081!7.09e-15!216;UBERON:0002384!5.94e-12!375;UBERON:0002204!1.43e-11!167 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.06e-63,76;UBERON:0002390,1.46e-63,98;UBERON:0003061,1.46e-63,98;UBERON:0001474,2.54e-58,82;UBERON:0002193,1.16e-56,108;UBERON:0002405,6.29e-53,93;UBERON:0004765,2.98e-52,90;UBERON:0001434,5.09e-46,100;UBERON:0003081,7.19e-25,203;UBERON:0002204,1.92e-23,167;UBERON:0002384,8.86e-17,371;UBERON:0000926,5.03e-12,315;UBERON:0004120,5.03e-12,315;UBERON:0006603,5.03e-12,315 | |||
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|short_description=p5@HLA-DQB1 | |short_description=p5@HLA-DQB1 | ||
}} | }} |
Latest revision as of 03:41, 18 September 2015
Short description: | p5@HLA-DQB1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_HLA-DQB1_5end |
Coexpression cluster: | C120_immature_salivary_tongue_skin_cervical_CD14_CD34 |
Association with transcript: | -56bp_to_M57650_5end |
EntrezGene: | HLA-DQB1 |
HGNC: | 4944 |
UniProt: | Q29969 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.06e-63 | 76 |
hematopoietic system | 1.46e-63 | 98 |
blood island | 1.46e-63 | 98 |
bone element | 2.54e-58 | 82 |
hemolymphoid system | 1.16e-56 | 108 |
immune system | 6.29e-53 | 93 |
skeletal element | 2.98e-52 | 90 |
skeletal system | 5.09e-46 | 100 |
lateral plate mesoderm | 7.19e-25 | 203 |
musculoskeletal system | 1.92e-23 | 167 |
connective tissue | 8.86e-17 | 371 |
mesoderm | 5.03e-12 | 315 |
mesoderm-derived structure | 5.03e-12 | 315 |
presumptive mesoderm | 5.03e-12 | 315 |