FFCP PHASE1:Hg19::chr6:31789994..31790022,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr6:31789994..31790022,+ | |||
|coexpression_cluster_id=C2784 | |||
|description=CAGE_peak_at_chr6:31789994..31790022,+ | |description=CAGE_peak_at_chr6:31789994..31790022,+ | ||
|id=chr6:31789994..31790022,+ | |id=chr6:31789994..31790022,+ | ||
|ontology_enrichment_celltype=CL:0000839!3.01e-12!70;CL:0000557!6.45e-12!71;CL:0002009!3.82e-10!65;CL:0002194!9.06e-10!63;CL:0000576!9.06e-10!63;CL:0000040!9.06e-10!63;CL:0000559!9.06e-10!63;CL:0000766!3.14e-09!76;CL:0000860!2.24e-08!45;CL:0000763!3.59e-08!112;CL:0000049!3.59e-08!112;CL:0002057!4.30e-08!42 | |ontology_enrichment_celltype=CL:0000839!3.01e-12!70;CL:0000557!6.45e-12!71;CL:0002009!3.82e-10!65;CL:0002194!9.06e-10!63;CL:0000576!9.06e-10!63;CL:0000040!9.06e-10!63;CL:0000559!9.06e-10!63;CL:0000766!3.14e-09!76;CL:0000860!2.24e-08!45;CL:0000763!3.59e-08!112;CL:0000049!3.59e-08!112;CL:0002057!4.30e-08!42 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.49e-22;33!CL:0002057;1.49e-22;33!CL:0000473;8.11e-15;39!CL:0000234;8.11e-15;39!CL:0000576;1.28e-13;48!CL:0000766;3.91e-08;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000557,4.64e-19,67;CL:0000839,4.07e-18,66;CL:0000860,1.82e-17,42;CL:0002057,1.82e-17,42;CL:0000766,8.91e-16,72;CL:0002009,9.34e-16,61;CL:0002194,2.96e-15,59;CL:0000576,2.96e-15,59;CL:0000040,2.96e-15,59;CL:0000559,2.96e-15,59;CL:0000473,2.54e-14,48;CL:0000234,2.54e-14,48;CL:0000763,9.67e-13,108;CL:0000049,9.67e-13,108;CL:0002031,3.15e-08,120 | |||
|ontology_enrichment_development_v019=CL:0002057;4.38e-13;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.56e-20!115;UBERON:0000062!8.00e-14!511;UBERON:0002371!2.54e-09!80;UBERON:0001049!3.59e-09!57;UBERON:0005068!3.59e-09!57;UBERON:0006241!3.59e-09!57;UBERON:0007135!3.59e-09!57;UBERON:0001474!1.11e-08!86;UBERON:0000467!3.87e-08!625;UBERON:0000480!5.69e-08!626;UBERON:0002405!5.81e-08!115;UBERON:0000468!7.12e-08!659;UBERON:0000923!4.81e-07!604;UBERON:0005291!4.81e-07!604;UBERON:0006598!4.81e-07!604;UBERON:0002532!4.81e-07!604;UBERON:0002050!6.85e-07!605;UBERON:0005423!6.85e-07!605;UBERON:0000922!9.32e-07!612 | |ontology_enrichment_uberon=UBERON:0007023!4.56e-20!115;UBERON:0000062!8.00e-14!511;UBERON:0002371!2.54e-09!80;UBERON:0001049!3.59e-09!57;UBERON:0005068!3.59e-09!57;UBERON:0006241!3.59e-09!57;UBERON:0007135!3.59e-09!57;UBERON:0001474!1.11e-08!86;UBERON:0000467!3.87e-08!625;UBERON:0000480!5.69e-08!626;UBERON:0002405!5.81e-08!115;UBERON:0000468!7.12e-08!659;UBERON:0000923!4.81e-07!604;UBERON:0005291!4.81e-07!604;UBERON:0006598!4.81e-07!604;UBERON:0002532!4.81e-07!604;UBERON:0002050!6.85e-07!605;UBERON:0005423!6.85e-07!605;UBERON:0000922!9.32e-07!612 | ||
|ontology_enrichment_uberon_v019=UBERON:0000073;8.70e-07;53!UBERON:0002616;8.70e-07;53 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,5.09e-17,114;UBERON:0002371,1.04e-16,76;UBERON:0001474,9.99e-15,82;UBERON:0002405,1.34e-14,93;UBERON:0002390,1.64e-13,98;UBERON:0003061,1.64e-13,98;UBERON:0004765,1.61e-12,90;UBERON:0002193,5.40e-12,108;UBERON:0001049,1.32e-10,56;UBERON:0005068,1.32e-10,56;UBERON:0006241,1.32e-10,56;UBERON:0007135,1.32e-10,56;UBERON:0001434,2.71e-10,100;UBERON:0000073,3.26e-09,53;UBERON:0002616,3.26e-09,53;UBERON:0002346,8.97e-08,86;UBERON:0003075,9.88e-08,82;UBERON:0007284,9.88e-08,82;UBERON:0002780,2.37e-07,41;UBERON:0001890,2.37e-07,41;UBERON:0003080,2.37e-07,41;UBERON:0006240,2.37e-07,41;UBERON:0003081,7.25e-07,203 | |||
|phase1_expression=0.181678379270557,0,0.140954404095971,0,0,0,0,0,0.261185628199839,0.491467873003018,1.39560233594486,0,0,0.123766352960047,0,0,0.602694528023977,0.730310090387373,0,0.123121058076788,0.204000691244253,0,0,0,0.125542639594803,0.152826811495903,0.410502947249729,0.157421562627358,0.393364276848904,0,0.154816123316076,0,0.30120591877825,0.369754010166788,0.232401601740905,0,0,0,0,0.217010870715852,1.34349284543955,1.29557466407592,1.03030227053675,0.290796477559129,1.13362783106643,1.4555043671269,1.85943229524548,3.70051099219643,5.26500830521676,4.02769349251011,2.0492856522328,2.83778675866302,3.7922024881028,10.973239620925,12.1883837934908,0.564727018627814,1.63743690034707,1.57306439111559,2.14258724659632,3.85114832491312,1.27867425159808,0.989553900560148,0.997318288108159,0.426224750532694,1.16083695451434,2.26954089876456,2.4912889959823,4.77372463987812,5.73631210262222,5.42972111762792,1.81619850790011,1.84138817993782,2.21523671208619,0,0,0,0,0,0,0,0.19891667719909,0,1.75996244461323,0,0,0,0.400395987036012,0,0,0,0,0,0,0,0,0,0,0,0,0.167186495390678,0,0,0,0.111410456885174,0,0,0,0,0,0,0.276350017785848,0,0,0,0,0,0,0.34362744548263,0,0,0,0,0,0.127986611154418,0,0,0,0.201606743224732,0,0.289648807765598,0,0,0,0,0,0,0,0,0.0945348171640679,0,0.087834785693126,1.89919659471683,0,0,2.59637914923747,0.522389211897802,0.930705723632056,0,0,0,1.19257444420023,0,0,0,0,0,0,0.775250277507987,0,0.33472061276467,0,0,0.488124115096339,0,0,0.17859945656816,0.22452937262617,0.112611480483322,1.53316637465883,0,0.549605231791222,0,0,0,0,0.12663051166458,0,0,0,0,0,0.24666754841716,0,0.538842688278752,0.163461903113459,0,0,0,0.312160076830321,0.570471821544449,0.149448680551801,0.117434498643765,0.323745888736263,0.140450806702248,0,0.122834317311768,0.309977343527296,0,0.741800787835671,0,0,0.336672227908132,0.250237039743928,0,0,0,0,0.226864366320042,0.358779271377724,0,0,0,0.412210116953756,0.515281080091258,0.18611685633159,0.168776332241266,0.292311015483596,0.252433774244115,0.368199594569197,0.161646056818812,0.355009592516614,0.201504196455281,0.169560592310488,0.193260853163297,0,0,0.487894824518382,0,0,0.414644220061482,0,0,1.56449532329816,0.643240938192885,2.76269842704961,0.928735856063958,0,0.709840800239063,0.842923450390509,0.482022059766964,0.220587945464788,0.653638332277218,0.71181185733329,0.404493924480493,0.588664395376038,0,0,0,0,0,2.53510069643662,0.982827216677626,1.18157981336281,0,0.491953754172454,0.171567810298526,0.329250856225877,0,0.100528972411631,0,0,0,1.44331342025273,0,0.117408694235822,0.144366447761074,0,0,0,1.71697232418975,0.246217006087397,0.468008530278475,0.594524649154913,0,0.503946384596579,0.141775097242386,0,0,0,1.97065295158377,0.792435906119034,17.2082335898841,11.5295962733569,27.7733353538036,0.126995788584338,0,0,3.4214489204541,0.102827492703324,0.600686115687835,0,0,0,0.07333828582095,0.258543431515556,0,0,0.26593811658487,0,0,0,0.532844358032199,0.142977993658148,0,0,0,0.355391948742546,0.791951872933429,0.301439377059586,0,0.099972991182057,0,0.502257091432126,0,0.479249710983165,0,0,0.434343920002738,0,0,0.112085143993527,0,0.215627574859517,0,0,0,0,0,0,0,0,0,0.36807447515742,0,0,0,0,0.315404830067869,0.234282829985426,0,0,0,0.664225598535437,0,0.434418072340414,0.979005787313703,1.02943027143257,0,0.215714200818617,0,0.303127571446259,0,0,0,0.460385919864187,0,0.384417447767103,0.511707249066704,0,0,0.308419387605311,0.177561725313127,0.246381468041427,0,0.116210378459959,1.81289174387433,0,0,0.229628896329213,0.546273504020151,0,0,0.231046011313244,0,0,0.105551628892876,1.13733384070897,0.340187410553031,0,0,0,0,0.254876273045038,0,0,0.219259876645935,0.784306353074702,0,0,0,3.50339439602256,0.183138929636687,0.165018999841176,1.14853107599234,0,0,0.290012154876366,0,0.15350367472613,0,0,0.290033387828457,0.0852266274161009,0,0.165284915360978,0,0.638063562472921,0,0,0,0,0.308033580176089,0,0.869932992075073,0,0.143124886741991,0,0.316379424718726,0,0,0.42793898803392,1.27281299170375,2.35484592059769,0,0.274537029736055,0.117812402345686,0.606547444719948,1.58510321173008,0.421258456238981,0.48763373908959,0.487426979262569,0,0.136499911407986,0.424216295861138,0,0.551365343546124,0,0,0,0,0.202910376962704,0.6196469961995,0.281695602532241,0,0,0,0.354761064070598,0,0.658589785919804,0.379473173765715,0,0.288666338176536,0,0,4.14232723417828,0.86101074534246,0,0.443430153536676,0.229723400206959,0,0,0,0.238231775457789,0,0,0,0,0.106824071127473,0.962479855263359,0,0.185803175125719,0,0.142283686696828,0,0.199579371432817,0.191505370132367,0.846694330895531,0,0.280797178113459,0,0,2.50634477090067,0.846458889008016,0.1605880751037,0.201799707191048,0,0,0.307240764308458,0.671028323677248,1.16794399198336,1.17232857241224,0.556812347790485,0,0.270455678475983,0,0,0,1.46508179271894,0,1.11443384277478,0.284136146806413,0,0,0.307160702099232,0.994147647766298,2.2507106625682,0.111308705022906,0.16480387422676,0,3.38721580026819,0.552567831062295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|short_description=p@chr6:31789994..31790022,+ | |short_description=p@chr6:31789994..31790022,+ | ||
}} | }} |
Latest revision as of 00:10, 31 July 2015
Short description: | p@chr6:31789994..31790022, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:31789994..31790022, + |
Coexpression cluster: | C2784_Mast_vagina_CD14_liver_medulla_thalamus_substantia |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
granulocyte monocyte progenitor cell | 4.64e-19 | 67 |
myeloid lineage restricted progenitor cell | 4.07e-18 | 66 |
classical monocyte | 1.82e-17 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.82e-17 | 42 |
myeloid leukocyte | 8.91e-16 | 72 |
macrophage dendritic cell progenitor | 9.34e-16 | 61 |
monopoietic cell | 2.96e-15 | 59 |
monocyte | 2.96e-15 | 59 |
monoblast | 2.96e-15 | 59 |
promonocyte | 2.96e-15 | 59 |
defensive cell | 2.54e-14 | 48 |
phagocyte | 2.54e-14 | 48 |
myeloid cell | 9.67e-13 | 108 |
common myeloid progenitor | 9.67e-13 | 108 |
hematopoietic lineage restricted progenitor cell | 3.15e-08 | 120 |
Ontology term | p-value | n |
---|---|---|
adult organism | 5.09e-17 | 114 |
bone marrow | 1.04e-16 | 76 |
bone element | 9.99e-15 | 82 |
immune system | 1.34e-14 | 93 |
hematopoietic system | 1.64e-13 | 98 |
blood island | 1.64e-13 | 98 |
skeletal element | 1.61e-12 | 90 |
hemolymphoid system | 5.40e-12 | 108 |
neural tube | 1.32e-10 | 56 |
neural rod | 1.32e-10 | 56 |
future spinal cord | 1.32e-10 | 56 |
neural keel | 1.32e-10 | 56 |
skeletal system | 2.71e-10 | 100 |
regional part of nervous system | 3.26e-09 | 53 |
regional part of brain | 3.26e-09 | 53 |
neurectoderm | 8.97e-08 | 86 |
neural plate | 9.88e-08 | 82 |
presumptive neural plate | 9.88e-08 | 82 |
regional part of forebrain | 2.37e-07 | 41 |
forebrain | 2.37e-07 | 41 |
anterior neural tube | 2.37e-07 | 41 |
future forebrain | 2.37e-07 | 41 |
lateral plate mesoderm | 7.25e-07 | 203 |