FFCP PHASE1:Hg19::chr16:5121814..5121855,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr16:5121814..5121855,+
|short_description=p1@ALG1
|description=CAGE_peak_1_at_ALG1_5end
|association_with_transcript=0bp_to_ENST00000262374,uc010bue.2_5end
|...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=56052 | |EntrezGene=56052 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18294 | |HGNC=18294 | ||
|TSSclassifier=strong | |||
|UniProt=Q9BT22 | |UniProt=Q9BT22 | ||
|association_with_transcript=0bp_to_ENST00000262374,uc010bue.2_5end | |||
|cluster_id=chr16:5121814..5121855,+ | |||
|coexpression_cluster_id=C887 | |||
|description=CAGE_peak_1_at_ALG1_5end | |||
|id=chr16:5121814..5121855,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.63e-26!180;CL:0000548!4.20e-20!679;CL:0000004!4.20e-20!679;CL:0000255!4.20e-20!679;CL:0000220!8.13e-20!246;CL:0000012!1.40e-19!682;CL:0002321!1.91e-19!248;CL:0000222!1.87e-17!119;CL:0000144!4.71e-17!625;CL:0002371!4.20e-16!591;CL:0000183!5.51e-15!59;CL:0000003!3.71e-14!722;CL:0000680!7.00e-14!57;CL:0000056!7.00e-14!57;CL:0000355!7.00e-14!57;CL:0000192!1.15e-13!42;CL:0000514!1.15e-13!42;CL:0000187!3.74e-13!54;CL:0000393!8.04e-13!60;CL:0000211!8.04e-13!60;CL:0000057!1.93e-11!75;CL:0000359!2.07e-10!32;CL:0000066!5.23e-07!254 | |||
|ontology_enrichment_celltype_v019=CL:0000192;6.66e-10;43!CL:0000359;8.37e-10;32!CL:0000187;6.19e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,7.66e-20,250;CL:0000222,7.82e-18,121;CL:0000680,5.94e-14,58;CL:0000056,5.94e-14,58;CL:0000355,5.94e-14,58;CL:0000192,1.05e-13,43;CL:0000514,1.05e-13,43;CL:0000187,3.18e-13,55;CL:0000393,6.68e-13,61;CL:0000211,6.68e-13,61;CL:0000057,3.68e-11,76;CL:0000359,2.07e-10,32;CL:0000066,6.36e-07,253 | |||
|ontology_enrichment_development_v019=CL:0000514;6.66e-10;43!CL:0000355;2.40e-07;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004290!7.45e-14!70;UBERON:0005256!1.72e-13!143;UBERON:0000490!2.07e-13!138;UBERON:0000914!7.09e-13!83;UBERON:0002329!7.09e-13!83;UBERON:0003077!7.09e-13!83;UBERON:0003059!7.09e-13!83;UBERON:0007282!7.09e-13!83;UBERON:0009618!7.09e-13!83;UBERON:0007285!7.09e-13!83;UBERON:0000486!1.23e-12!82;UBERON:0002100!7.21e-12!216;UBERON:0001134!1.79e-11!61;UBERON:0002036!1.79e-11!61;UBERON:0003082!1.79e-11!61;UBERON:0003914!2.11e-11!118;UBERON:0001637!2.33e-11!42;UBERON:0003509!2.33e-11!42;UBERON:0004572!2.33e-11!42;UBERON:0002049!9.33e-11!79;UBERON:0007798!9.33e-11!79;UBERON:0003104!1.16e-10!238;UBERON:0009142!1.16e-10!238;UBERON:0002385!1.31e-10!63;UBERON:0001015!1.31e-10!63;UBERON:0000383!1.31e-10!63;UBERON:0004872!2.73e-09!84;UBERON:0000055!4.97e-09!69;UBERON:0004573!1.43e-08!33;UBERON:0004571!1.43e-08!33;UBERON:0001981!4.71e-08!60;UBERON:0007500!4.71e-08!60;UBERON:0004537!4.71e-08!60;UBERON:0006965!4.71e-08!60 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;6.70e-09;42!UBERON:0003509;6.70e-09;42!UBERON:0004572;6.70e-09;42!UBERON:0004573;6.70e-08;33!UBERON:0004571;6.70e-08;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007503,3.30e-16,78;UBERON:0000490,9.24e-16,148;UBERON:0002329,6.10e-14,71;UBERON:0003059,6.10e-14,71;UBERON:0007282,6.10e-14,71;UBERON:0004290,6.10e-14,71;UBERON:0009618,6.10e-14,71;UBERON:0007524,1.37e-13,73;UBERON:0003077,3.24e-13,72;UBERON:0007285,3.24e-13,72;UBERON:0005256,5.37e-13,122;UBERON:0003104,6.54e-13,160;UBERON:0009142,6.54e-13,160;UBERON:0000486,9.83e-13,83;UBERON:0002100,1.40e-12,199;UBERON:0001134,1.46e-11,62;UBERON:0002036,1.46e-11,62;UBERON:0003082,1.46e-11,62;UBERON:0001637,2.33e-11,42;UBERON:0003509,2.33e-11,42;UBERON:0004572,2.33e-11,42;UBERON:0003914,2.69e-11,117;UBERON:0002049,5.06e-11,78;UBERON:0007798,5.06e-11,78;UBERON:0002385,1.06e-10,64;UBERON:0001015,1.06e-10,64;UBERON:0000383,1.06e-10,64;UBERON:0004872,1.62e-09,83;UBERON:0000055,2.77e-09,68;UBERON:0004573,1.43e-08,33;UBERON:0004571,1.43e-08,33;UBERON:0007500,2.62e-08,59;UBERON:0001981,2.62e-08,59;UBERON:0004537,2.62e-08,59;UBERON:0006965,2.62e-08,59;UBERON:0004535,9.71e-07,109 | |||
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| ||
|short_description=p1@ALG1 | |||
}} | }} |
Latest revision as of 21:44, 16 September 2015
Short description: | p1@ALG1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ALG1_5end |
Coexpression cluster: | C887_Mesenchymal_Alveolar_Smooth_Renal_Fibroblast_leiomyoma_Preadipocyte |
Association with transcript: | 0bp_to_ENST00000262374, uc010bue.2_5end |
EntrezGene: | ALG1 |
HGNC: | 18294 |
UniProt: | Q9BT22 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 7.66e-20 | 250 |
mesodermal cell | 7.82e-18 | 121 |
muscle precursor cell | 5.94e-14 | 58 |
myoblast | 5.94e-14 | 58 |
multi-potent skeletal muscle stem cell | 5.94e-14 | 58 |
smooth muscle cell | 1.05e-13 | 43 |
smooth muscle myoblast | 1.05e-13 | 43 |
muscle cell | 3.18e-13 | 55 |
electrically responsive cell | 6.68e-13 | 61 |
electrically active cell | 6.68e-13 | 61 |
fibroblast | 3.68e-11 | 76 |
vascular associated smooth muscle cell | 2.07e-10 | 32 |
epithelial cell | 6.36e-07 | 253 |