FFCP PHASE1:Hg19::chr16:50667686..50667701,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr16:50667686..50667701,-
|short_description=p@chr16:50667686..50667701,-
|description=CAGE_peak_at_chr16:50667686..50667701,-
|association_with_transcript=NA
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr16:50667686..50667701,- | |||
|coexpression_cluster_id=C101 | |||
|description=CAGE_peak_at_chr16:50667686..50667701,- | |||
|id=chr16:50667686..50667701,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000182;3.00e-13;12!CL:0002253;1.27e-09;2!CL:0000322;9.64e-07;3!CL:0000632;9.64e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,3.00e-13,12;CL:0002253,1.33e-09,2;CL:0000223,3.16e-07,58;CL:0000322,8.62e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0004161;2.15e-14;11!UBERON:0001041;5.83e-14;30!UBERON:0009497;2.80e-12;13!UBERON:0006965;1.71e-09;2!UBERON:0003104;6.88e-09;31 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0050619;6.78e-18;1!DOID:1357;6.78e-18;1!DOID:1325;2.14e-10;7!DOID:3904;2.14e-10;7!DOID:0050615;6.37e-10;16!DOID:3910;1.71e-09;2!DOID:3905;2.75e-08;9 | |||
|ontology_enrichment_disease_v019_2=DOID:0050619,6.23e-18,1;DOID:1357,6.23e-18,1;DOID:1325,1.94e-10,7;DOID:3904,1.94e-10,7;DOID:0050615,5.90e-10,16;DOID:3910,1.44e-09,2;DOID:3905,2.55e-08,9;DOID:305,2.56e-07,106 | |||
|ontology_enrichment_uberon=UBERON:0007023!2.88e-33!115;UBERON:0001049!3.41e-26!57;UBERON:0005068!3.41e-26!57;UBERON:0006241!3.41e-26!57;UBERON:0007135!3.41e-26!57;UBERON:0001017!7.80e-22!82;UBERON:0005743!1.31e-21!86;UBERON:0002616!2.89e-21!59;UBERON:0003075!1.75e-20!86;UBERON:0007284!1.75e-20!86;UBERON:0000955!1.69e-19!69;UBERON:0006238!1.69e-19!69;UBERON:0002346!4.08e-19!90;UBERON:0000073!1.36e-18!94;UBERON:0001016!1.36e-18!94;UBERON:0003080!6.45e-16!42;UBERON:0002020!1.10e-14!34;UBERON:0003528!1.10e-14!34;UBERON:0002780!1.24e-14!41;UBERON:0001890!1.24e-14!41;UBERON:0006240!1.24e-14!41;UBERON:0002791!2.38e-13!33;UBERON:0001893!7.81e-13!34;UBERON:0000153!8.15e-13!129;UBERON:0007811!8.15e-13!129;UBERON:0002298!2.52e-12!8;UBERON:0003076!3.56e-12!15;UBERON:0003057!3.56e-12!15;UBERON:0000033!3.95e-12!123;UBERON:0004121!1.26e-10!169;UBERON:0001869!1.77e-10!32;UBERON:0003056!3.26e-10!61;UBERON:0000924!3.94e-10!173;UBERON:0006601!3.94e-10!173;UBERON:0000025!5.16e-10!194;UBERON:0004733!5.69e-10!12;UBERON:0002028!5.69e-10!12;UBERON:0007277!5.69e-10!12;UBERON:0002308!1.16e-09!9;UBERON:0000125!1.16e-09!9;UBERON:0002619!2.91e-09!22;UBERON:0004111!3.71e-09!241;UBERON:0004732!4.44e-09!13;UBERON:0001950!9.56e-09!20;UBERON:0000475!5.16e-08!365;UBERON:0000956!6.96e-08!25;UBERON:0000203!6.96e-08!25;UBERON:0002680!8.42e-08!9;UBERON:0001895!8.42e-08!9;UBERON:0010092!8.42e-08!9;UBERON:0000477!1.26e-07!286;UBERON:0006331!3.74e-07!3;UBERON:0002420!5.03e-07!9;UBERON:0007245!5.03e-07!9;UBERON:0010009!5.03e-07!9;UBERON:0010011!5.03e-07!9;UBERON:0000454!5.03e-07!9;UBERON:0000988!7.46e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0001764;6.78e-18;1!UBERON:0001825;6.78e-18;1!UBERON:0002107;2.21e-14;19!UBERON:0006925;2.21e-14;19!UBERON:0002423;5.20e-11;25!UBERON:0004903;1.71e-09;2!UBERON:0002173;1.71e-09;2!UBERON:0002186;1.71e-09;2!UBERON:0002365;1.71e-08;31!UBERON:0002330;1.71e-08;31!UBERON:0002368;7.11e-08;33!UBERON:0004821;9.64e-07;3!UBERON:0007499;9.64e-07;3!UBERON:0003215;9.64e-07;3!UBERON:0010368;9.64e-07;3!UBERON:0009911;9.64e-07;3!UBERON:0002299;9.64e-07;3!UBERON:0006524;9.64e-07;3!UBERON:0008874;9.64e-07;3!UBERON:0002169;9.64e-07;3!UBERON:0004894;9.64e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001764,6.23e-18,1;UBERON:0001825,6.23e-18,1;UBERON:0007499,1.12e-16,25;UBERON:0009856,4.87e-16,26;UBERON:0002107,2.28e-14,19;UBERON:0006925,2.28e-14,19;UBERON:0008836,2.28e-14,19;UBERON:0008835,1.87e-12,22;UBERON:0003894,1.87e-12,22;UBERON:0009854,6.29e-12,23;UBERON:0009497,5.34e-11,25;UBERON:0000015,5.34e-11,25;UBERON:0002423,5.34e-11,25;UBERON:0006235,5.34e-11,25;UBERON:0004161,5.34e-11,25;UBERON:0004903,1.44e-09,2;UBERON:0002173,1.44e-09,2;UBERON:0002186,1.44e-09,2;UBERON:0005911,1.54e-09,82;UBERON:0002365,6.33e-09,31;UBERON:0002330,6.33e-09,31;UBERON:0002368,6.21e-08,35;UBERON:0003929,9.56e-08,54;UBERON:0004821,8.62e-07,3;UBERON:0003215,8.62e-07,3;UBERON:0010368,8.62e-07,3;UBERON:0009911,8.62e-07,3;UBERON:0002299,8.62e-07,3;UBERON:0006524,8.62e-07,3;UBERON:0008874,8.62e-07,3;UBERON:0002169,8.62e-07,3;UBERON:0004894,8.62e-07,3 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.313454721478088,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251248665256743,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393419540227666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327447688744282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.312160076830321,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0.116193942869518,0.207322110030741,0,0.36497735907583,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47008711385542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343143423810856,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.362578348774867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0.165018999841176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121360521749513,0,1.98895302764489,0,0,0,0,0.422008249231538,0,0,0,1.79323189425963,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,1.93866549219044,0.0927680981618513,0,0,0.174919999992391,0.724999575434793,0,0,0,0,0,0.173624994933292,0,0.120596438625408,0,0.331737779793674,0.591095237907095,0.219385397153973,0,0,0.307801034015188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.16388639742091,0,0.0884575645033392,0,0,0,0,0.337005664903385,0,0.937057782901357,0,0,0,0,0,0,0.31593289814244,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.290967049465258,0,0.677942222341597,0,0,0.126621591911757,0,0,0.426905989478705,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,10.8720791583969,9.64265543059648,11.3911989113572,0,0,0,0.136203406111576,0,0,0,0,0,0.182248669974074,0,0.0788057072991982,0.157363764404994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.387848869084652,0.52893040697076,0,0,0,0.157204305099666,0.414239055347196,0,0,0,0,0,0,0,0,2.19875734750328,0.886068179966986,0.122026264901963,0.250381861413,0,0.554645257684261,0.372578417648301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.260994291965212,0,0,0,0,0,0,0.176689145945881,0.192914038270915,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192687675289379,0,0,0.205116364240755,0,0,0.484426936895553,0,0.196295437002051,0,0,0,0,0,0.198916222116275,0,0,0,0,0,0.295712172434091,0,0,0,0.253663240775627,1.09394961803644,0,0,0,0,0,0.336283722218824,0,0,0.0887023701626388,0,0,0.203909198930495,0.0657727735628491,0,0,0,0.157115589916002,0,0.913158720509496,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0.846774100381858,0,0,0,0,0,0,0,0,0,0,0,13.7276034861344,0,6.32498059418176,0,0,0,0.874238242015829,0,0.245148321753905,0,0.588925401344836,0,0.4226557275834,0,0,0,0,0,0,0,0.730336388246517,0,0.430018749454354,0.157771562193185,0.135982980381829,0.872701380680755,0,0,0,0,0,0,0.760191006068622,0,0,0,0,0,0.267964130156178,0.829169439458779,0,0,0.476128862927481,0,0.0620747142958579,0,0,0,0,0.342233301085281,0,0.0717222053926763,0,0,0,0,0,0,0.366724332548599,0,0.665756774185513,0.201273793591026,0 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|phase1_expression=0.181678379270557,0.214100523890983,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.313454721478088,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251248665256743,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393419540227666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327447688744282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.312160076830321,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0.116193942869518,0.207322110030741,0,0.36497735907583,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47008711385542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343143423810856,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.362578348774867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0.165018999841176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121360521749513,0,1.98895302764489,0,0,0,0,0.422008249231538,0,0,0,1.79323189425963,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,1.93866549219044,0.0927680981618513,0,0,0.174919999992391,0.724999575434793,0,0,0,0,0,0.173624994933292,0,0.120596438625408,0,0.331737779793674,0.591095237907095,0.219385397153973,0,0,0.307801034015188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.16388639742091,0,0.0884575645033392,0,0,0,0,0.337005664903385,0,0.937057782901357,0,0,0,0,0,0,0.31593289814244,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.290967049465258,0,0.677942222341597,0,0,0.126621591911757,0,0,0.426905989478705,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,10.8720791583969,9.64265543059648,11.3911989113572,0,0,0,0.136203406111576,0,0,0,0,0,0.182248669974074,0,0.0788057072991982,0.157363764404994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.387848869084652,0.52893040697076,0,0,0,0.157204305099666,0.414239055347196,0,0,0,0,0,0,0,0,2.19875734750328,0.886068179966986,0.122026264901963,0.250381861413,0,0.554645257684261,0.372578417648301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.260994291965212,0,0,0,0,0,0,0.176689145945881,0.192914038270915,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192687675289379,0,0,0.205116364240755,0,0,0.484426936895553,0,0.196295437002051,0,0,0,0,0,0.198916222116275,0,0,0,0,0,0.295712172434091,0,0,0,0.253663240775627,1.09394961803644,0,0,0,0,0,0.336283722218824,0,0,0.0887023701626388,0,0,0.203909198930495,0.0657727735628491,0,0,0,0.157115589916002,0,0.913158720509496,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0.846774100381858,0,0,0,0,0,0,0,0,0,0,0,13.7276034861344,0,6.32498059418176,0,0,0,0.874238242015829,0,0.245148321753905,0,0.588925401344836,0,0.4226557275834,0,0,0,0,0,0,0,0.730336388246517,0,0.430018749454354,0.157771562193185,0.135982980381829,0.872701380680755,0,0,0,0,0,0,0.760191006068622,0,0,0,0,0,0.267964130156178,0.829169439458779,0,0,0.476128862927481,0,0.0620747142958579,0,0,0,0,0.342233301085281,0,0.0717222053926763,0,0,0,0,0,0,0.366724332548599,0,0.665756774185513,0.201273793591026,0 | ||
|short_description=p@chr16:50667686..50667701,- | |||
}} | }} |
Latest revision as of 09:33, 25 July 2015
Short description: | p@chr16:50667686..50667701, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:50667686..50667701, - |
Coexpression cluster: | C101_small_cerebellum_maxillary_colon_parietal_epididymis_merkel |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 3.00e-13 | 12 |
epithelial cell of large intestine | 1.33e-09 | 2 |
endodermal cell | 3.16e-07 | 58 |
pneumocyte | 8.62e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
maxillary sinus | 6.23e-18 | 1 |
paranasal sinus | 6.23e-18 | 1 |
epithelial sac | 1.12e-16 | 25 |
sac | 4.87e-16 | 26 |
liver | 2.28e-14 | 19 |
digestive gland | 2.28e-14 | 19 |
liver bud | 2.28e-14 | 19 |
hepatic diverticulum | 1.87e-12 | 22 |
liver primordium | 1.87e-12 | 22 |
digestive tract diverticulum | 6.29e-12 | 23 |
epithelium of foregut-midgut junction | 5.34e-11 | 25 |
anatomical boundary | 5.34e-11 | 25 |
hepatobiliary system | 5.34e-11 | 25 |
foregut-midgut junction | 5.34e-11 | 25 |
septum transversum | 5.34e-11 | 25 |
bronchoalveolar duct junction | 1.44e-09 | 2 |
alveolar duct | 1.44e-09 | 2 |
bronchiole | 1.44e-09 | 2 |
endo-epithelium | 1.54e-09 | 82 |
exocrine gland | 6.33e-09 | 31 |
exocrine system | 6.33e-09 | 31 |
endocrine gland | 6.21e-08 | 35 |
gut epithelium | 9.56e-08 | 54 |
pulmonary alveolus epithelium | 8.62e-07 | 3 |
alveolus | 8.62e-07 | 3 |
pulmonary lobule | 8.62e-07 | 3 |
lobule | 8.62e-07 | 3 |
alveolus of lung | 8.62e-07 | 3 |
alveolar system | 8.62e-07 | 3 |
pulmonary acinus | 8.62e-07 | 3 |
alveolar sac | 8.62e-07 | 3 |
alveolar wall | 8.62e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
paranasal sinus cancer | 6.23e-18 | 1 |
maxillary sinus cancer | 6.23e-18 | 1 |
bronchus cancer | 1.94e-10 | 7 |
bronchogenic carcinoma | 1.94e-10 | 7 |
respiratory system cancer | 5.90e-10 | 16 |
lung adenocarcinoma | 1.44e-09 | 2 |
lung carcinoma | 2.55e-08 | 9 |
carcinoma | 2.56e-07 | 106 |