FFCP PHASE1:Hg19::chr6:152126790..152126828,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2099 | |EntrezGene=2099 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3467 | |HGNC=3467 | ||
|TSSclassifier=strong | |||
|UniProt=E7EVR3,P03372 | |UniProt=E7EVR3,P03372 | ||
|association_with_transcript=0bp_to_ENST00000431219,ENST00000456483,NM_001122741,uc010kin.2,uc010kio.2,uc010kip.2_5end | |association_with_transcript=0bp_to_ENST00000431219,ENST00000456483,NM_001122741,uc010kin.2,uc010kio.2,uc010kip.2_5end | ||
|cluster_id=chr6:152126790..152126828,+ | |||
|coexpression_cluster_id=C233 | |||
|description=CAGE_peak_3_at_ESR1_5end | |description=CAGE_peak_3_at_ESR1_5end | ||
|id=chr6:152126790..152126828,+ | |id=chr6:152126790..152126828,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002149;2.66e-13;6!CL:0002255;2.66e-13;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002149,2.30e-13,6;CL:0002255,2.30e-13,6 | |||
|ontology_enrichment_development_v019=UBERON:0005795;1.59e-30;10!UBERON:0006603;8.92e-16;65!UBERON:0007297;2.40e-11;2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3001;2.66e-13;6!DOID:0060084;3.45e-07;3!DOID:127;3.45e-07;3 | |||
|ontology_enrichment_disease_v019_2=DOID:3001,2.30e-13,6;DOID:0060084,3.34e-07,3;DOID:127,3.34e-07,3 | |||
|ontology_enrichment_uberon=UBERON:0007023!4.97e-30!115;UBERON:0004175!6.45e-13!25;UBERON:0005156!4.36e-12!59;UBERON:0000990!4.36e-12!59;UBERON:0003133!3.70e-11!48;UBERON:0005795!7.55e-11!22;UBERON:0003975!8.30e-11!22;UBERON:0000995!1.80e-09!21;UBERON:0003134!2.99e-07!37;UBERON:0000474!2.99e-07!37 | |ontology_enrichment_uberon=UBERON:0007023!4.97e-30!115;UBERON:0004175!6.45e-13!25;UBERON:0005156!4.36e-12!59;UBERON:0000990!4.36e-12!59;UBERON:0003133!3.70e-11!48;UBERON:0005795!7.55e-11!22;UBERON:0003975!8.30e-11!22;UBERON:0000995!1.80e-09!21;UBERON:0003134!2.99e-07!37;UBERON:0000474!2.99e-07!37 | ||
|ontology_enrichment_uberon_v019=UBERON:0004175;7.81e-32;21!UBERON:0003975;8.52e-26;18!UBERON:0000995;4.06e-22;17!UBERON:0003133;1.74e-15;44!UBERON:0003134;7.07e-15;33!UBERON:0000474;1.23e-12;37!UBERON:0000007;1.47e-11;2!UBERON:0005156;2.31e-10;59!UBERON:0000990;2.31e-10;59!UBERON:0003100;3.44e-09;41!UBERON:0006947;7.76e-08;3!UBERON:0004054;7.76e-08;3!UBERON:0001723;1.35e-07;3!UBERON:0001033;1.35e-07;3!UBERON:0003135;1.59e-07;11!UBERON:0006834;9.91e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004175,2.36e-26,25;UBERON:0005795,6.94e-21,22;UBERON:0003975,8.62e-21,22;UBERON:0003133,3.70e-20,48;UBERON:0005156,4.77e-18,59;UBERON:0000990,4.77e-18,59;UBERON:0000995,1.24e-17,21;UBERON:0007023,1.50e-14,114;UBERON:0003134,3.43e-14,37;UBERON:0000474,3.43e-14,37;UBERON:0003100,1.35e-12,41;UBERON:0000007,1.55e-11,2;UBERON:0006947,8.17e-08,3;UBERON:0004054,8.17e-08,3;UBERON:0001723,1.39e-07,3;UBERON:0001033,1.39e-07,3;UBERON:0010056,1.39e-07,3;UBERON:0003135,1.58e-07,11;UBERON:0006834,9.91e-07,1 | |||
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| ||
|short_description=p3@ESR1 | |short_description=p3@ESR1 | ||
}} | }} |
Latest revision as of 05:43, 16 September 2015
Short description: | p3@ESR1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ESR1_5end |
Coexpression cluster: | C233_uterus_cervix_ovary_epididymis_colon_rectum_MCF7 |
Association with transcript: | 0bp_to_ENST00000431219, ENST00000456483, NM_001122741, uc010kin.2, uc010kio.2, uc010kip.2_5end |
EntrezGene: | ESR1 |
HGNC: | 3467 |
UniProt: | E7EVR3P03372 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of uterus | 2.30e-13 | 6 |
stromal cell of endometrium | 2.30e-13 | 6 |
Ontology term | p-value | n |
---|---|---|
internal genitalia | 2.36e-26 | 25 |
embryonic uterus | 6.94e-21 | 22 |
internal female genitalia | 8.62e-21 | 22 |
reproductive organ | 3.70e-20 | 48 |
reproductive structure | 4.77e-18 | 59 |
reproductive system | 4.77e-18 | 59 |
uterus | 1.24e-17 | 21 |
adult organism | 1.50e-14 | 114 |
female reproductive organ | 3.43e-14 | 37 |
female reproductive system | 3.43e-14 | 37 |
female organism | 1.35e-12 | 41 |
pituitary gland | 1.55e-11 | 2 |
male genital duct | 8.17e-08 | 3 |
internal male genitalia | 8.17e-08 | 3 |
tongue | 1.39e-07 | 3 |
gustatory system | 1.39e-07 | 3 |
future tongue | 1.39e-07 | 3 |
male reproductive organ | 1.58e-07 | 11 |
uterus or analog | 9.91e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
female reproductive endometrioid cancer | 2.30e-13 | 6 |
cell type benign neoplasm | 3.34e-07 | 3 |
leiomyoma | 3.34e-07 | 3 |