FFCP PHASE1:Hg19::chr6:151392051..151392059,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr6:151392051..151392059,+ | |||
|description=CAGE_peak_at_chr6:151392051..151392059,+ | |description=CAGE_peak_at_chr6:151392051..151392059,+ | ||
|id=chr6:151392051..151392059,+ | |id=chr6:151392051..151392059,+ | ||
|ontology_enrichment_celltype=CL:0000680!4.90e-08!57;CL:0000056!4.90e-08!57;CL:0000355!4.90e-08!57;CL:0000515!9.84e-08!4;CL:0000222!1.21e-07!119;CL:0000136!2.96e-07!15;CL:0000359!6.22e-07!32 | |ontology_enrichment_celltype=CL:0000680!4.90e-08!57;CL:0000056!4.90e-08!57;CL:0000355!4.90e-08!57;CL:0000515!9.84e-08!4;CL:0000222!1.21e-07!119;CL:0000136!2.96e-07!15;CL:0000359!6.22e-07!32 | ||
|ontology_enrichment_celltype_v019=CL:0000228;7.62e-26;1!CL:0002372;7.62e-26;1!CL:0002589;1.21e-13;2!CL:0002596;1.21e-13;2!CL:0002521;1.14e-09;3!CL:1000306;1.31e-07;4!CL:0002547;1.31e-07;4!CL:0000056;1.80e-07;4!CL:0000737;1.80e-07;4!CL:0000359;2.52e-07;32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000228,9.79e-26,1;CL:0002372,9.79e-26,1;CL:0002589,9.40e-14,2;CL:0002596,1.21e-13,2;CL:0002521,1.10e-09,3;CL:0000359,1.18e-07,32;CL:0000187,1.26e-07,55;CL:1000306,1.31e-07,4;CL:0002547,1.31e-07,4;CL:0000737,1.92e-07,4;CL:0000515,1.92e-07,4;CL:0000680,3.00e-07,58;CL:0000056,3.00e-07,58;CL:0000355,3.00e-07,58;CL:0000393,6.57e-07,61;CL:0000211,6.57e-07,61 | |||
|ontology_enrichment_development_v019=CL:0000515;1.80e-07;4 | |||
|ontology_enrichment_disease=DOID:2394!4.60e-13!14 | |ontology_enrichment_disease=DOID:2394!4.60e-13!14 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001134!1.43e-08!61;UBERON:0002036!1.43e-08!61;UBERON:0003082!1.43e-08!61;UBERON:0002385!3.42e-08!63;UBERON:0001015!3.42e-08!63;UBERON:0000383!3.42e-08!63;UBERON:0000486!1.89e-07!82;UBERON:0000914!3.01e-07!83;UBERON:0002329!3.01e-07!83;UBERON:0003077!3.01e-07!83;UBERON:0003059!3.01e-07!83;UBERON:0007282!3.01e-07!83;UBERON:0009618!3.01e-07!83;UBERON:0007285!3.01e-07!83;UBERON:0004290!4.85e-07!70 | |ontology_enrichment_uberon=UBERON:0001134!1.43e-08!61;UBERON:0002036!1.43e-08!61;UBERON:0003082!1.43e-08!61;UBERON:0002385!3.42e-08!63;UBERON:0001015!3.42e-08!63;UBERON:0000383!3.42e-08!63;UBERON:0000486!1.89e-07!82;UBERON:0000914!3.01e-07!83;UBERON:0002329!3.01e-07!83;UBERON:0003077!3.01e-07!83;UBERON:0003059!3.01e-07!83;UBERON:0007282!3.01e-07!83;UBERON:0009618!3.01e-07!83;UBERON:0007285!3.01e-07!83;UBERON:0004290!4.85e-07!70 | ||
|ontology_enrichment_uberon_v019=UBERON:0001529;1.21e-13;2!UBERON:0005396;1.21e-13;2!UBERON:0007204;1.21e-13;2!UBERON:0004573;8.36e-12;33!UBERON:0004571;8.36e-12;33!UBERON:0002190;1.14e-09;3!UBERON:0004797;1.31e-07;4!UBERON:0000415;1.31e-07;4!UBERON:0007240;1.31e-07;4!UBERON:0005742;1.31e-07;4!UBERON:0005734;1.31e-07;4!UBERON:0004664;1.31e-07;4!UBERON:0004663;1.31e-07;4!UBERON:0001637;9.93e-07;42!UBERON:0003509;9.93e-07;42!UBERON:0004572;9.93e-07;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001529,9.40e-14,2;UBERON:0007204,9.40e-14,2;UBERON:0005396,1.21e-13,2;UBERON:0004573,1.62e-12,33;UBERON:0004571,1.62e-12,33;UBERON:0001637,6.28e-10,42;UBERON:0003509,6.28e-10,42;UBERON:0004572,6.28e-10,42;UBERON:0002190,1.10e-09,3;UBERON:0000415,1.31e-07,4;UBERON:0007240,1.31e-07,4;UBERON:0005742,1.31e-07,4;UBERON:0005734,1.31e-07,4;UBERON:0004664,1.31e-07,4;UBERON:0004663,1.31e-07,4;UBERON:0007500,3.56e-07,59;UBERON:0001981,3.56e-07,59;UBERON:0004537,3.56e-07,59;UBERON:0006965,3.56e-07,59;UBERON:0001134,8.39e-07,62;UBERON:0002036,8.39e-07,62;UBERON:0003082,8.39e-07,62 | |||
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|phase1_expression=0.181678379270557,0,0.140954404095971,0,0.446961094427288,0,2.53299878168311,0,0,0,0,0,0,0,0,0.672325146451775,0,0,0,0,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0,0,0,0,0,0,5.16395805171553,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0.179389635688862,0,0,0,0,1.28820270022815,0,0.506328996723799,0,0,0,0.161646056818812,0.355009592516614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.428933980974443,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42636905040718,0.144781306667579,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.623912584592421,0,0.157702415033935,0,0,0,0,0,0.184369168541703,0,0,0,0,0,0,0,0,0,0,0.306923946576125,0,0,0,0,0,0,0,0.410635780069046,0,0.348631135379878,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215915916102139,0,0.270946437543853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275673144969061,0,0,0,0,0,0,0,0,0,2.20368642781448,0,0,0,0,0,1.86062352764589,0.372158369359667,0,0,0,0,0,1.56989728039846,0,0,0,0.202182481573316,0,0,0,0.243713489631284,0,0,0,0,0,0,0.438450885253763,0,0,0.811641507850816,0,0,0,0,0,0,0.422215270595328,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496166021811951,0,0,0,0,0,0.306345576763462,0.655745261419609,0,0,0,0,0,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0,0,1.77962244319307,0,0.302461847526478,0,0.73927574994817,0.159296767163702,0,0.310525913752519,0,0.265841714557995,0,0.150257608997218,0.761610424337591,0,0.181848659202559,0.107410557042488,0.464033759878494,0,0,0,0,0,0,0,0,0,0,0.244736704506468,0.895444205407437,0,0.219284049578707,0,0,0,0,0.345430341731199,0,0,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352675943690684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.647428837187895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr6:151392051..151392059,+ | |short_description=p@chr6:151392051..151392059,+ | ||
}} | }} |
Latest revision as of 20:56, 30 July 2015
Short description: | p@chr6:151392051..151392059, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:151392051..151392059, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multinucleate cell | 9.79e-26 | 1 |
myotube | 9.79e-26 | 1 |
smooth muscle cell of the brachiocephalic vasculature | 9.40e-14 | 2 |
smooth muscle cell of the carotid artery | 1.21e-13 | 2 |
subcutaneous fat cell | 1.10e-09 | 3 |
vascular associated smooth muscle cell | 1.18e-07 | 32 |
muscle cell | 1.26e-07 | 55 |
fibroblast of tunica adventitia of artery | 1.31e-07 | 4 |
fibroblast of the aortic adventitia | 1.31e-07 | 4 |
striated muscle cell | 1.92e-07 | 4 |
skeletal muscle myoblast | 1.92e-07 | 4 |
muscle precursor cell | 3.00e-07 | 58 |
myoblast | 3.00e-07 | 58 |
multi-potent skeletal muscle stem cell | 3.00e-07 | 58 |
electrically responsive cell | 6.57e-07 | 61 |
electrically active cell | 6.57e-07 | 61 |
Ontology term | p-value | n |
---|---|---|
brachiocephalic artery | 9.40e-14 | 2 |
brachiocephalic vasculature | 9.40e-14 | 2 |
carotid artery segment | 1.21e-13 | 2 |
systemic artery | 1.62e-12 | 33 |
systemic arterial system | 1.62e-12 | 33 |
artery | 6.28e-10 | 42 |
arterial blood vessel | 6.28e-10 | 42 |
arterial system | 6.28e-10 | 42 |
subcutaneous adipose tissue | 1.10e-09 | 3 |
artery wall | 1.31e-07 | 4 |
tunica adventitia of artery | 1.31e-07 | 4 |
adventitia | 1.31e-07 | 4 |
tunica adventitia of blood vessel | 1.31e-07 | 4 |
aorta tunica adventitia | 1.31e-07 | 4 |
aorta wall | 1.31e-07 | 4 |
epithelial tube open at both ends | 3.56e-07 | 59 |
blood vessel | 3.56e-07 | 59 |
blood vasculature | 3.56e-07 | 59 |
vascular cord | 3.56e-07 | 59 |
skeletal muscle tissue | 8.39e-07 | 62 |
striated muscle tissue | 8.39e-07 | 62 |
myotome | 8.39e-07 | 62 |