FFCP PHASE1:Hg19::chr6:138428938..138428953,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=64065 | |EntrezGene=64065 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17637 | |HGNC=17637 | ||
|TSSclassifier=strong | |||
|UniProt=Q96FX8 | |UniProt=Q96FX8 | ||
|association_with_transcript=-278bp_to_NM_022121,uc003qht.2_5end | |association_with_transcript=-278bp_to_NM_022121,uc003qht.2_5end | ||
|cluster_id=chr6:138428938..138428953,- | |||
|coexpression_cluster_id=C127 | |||
|description=CAGE_peak_8_at_PERP_5end | |description=CAGE_peak_8_at_PERP_5end | ||
|id=chr6:138428938..138428953,- | |id=chr6:138428938..138428953,- | ||
|ontology_enrichment_celltype=CL:0000223!5.50e-17!59;CL:0002076!1.56e-13!43;CL:0002251!3.12e-12!21;CL:0000066!1.31e-11!254 | |ontology_enrichment_celltype=CL:0000223!5.50e-17!59;CL:0002076!1.56e-13!43;CL:0002251!3.12e-12!21;CL:0000066!1.31e-11!254 | ||
|ontology_enrichment_celltype_v019=CL:0002553;5.49e-14;1!CL:0002253;1.05e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002553,5.15e-14,1;CL:0002253,1.05e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0009143;1.18e-13;1!UBERON:0008814;1.81e-07;2!UBERON:0010056;1.81e-07;2!UBERON:0001041;6.47e-07;30 | |||
|ontology_enrichment_disease=DOID:305!1.50e-14!106;DOID:0050687!5.68e-14!143;DOID:1749!1.94e-07!14;DOID:162!3.65e-07!235;DOID:0050615!8.78e-07!16;DOID:14566!8.87e-07!239 | |ontology_enrichment_disease=DOID:305!1.50e-14!106;DOID:0050687!5.68e-14!143;DOID:1749!1.94e-07!14;DOID:162!3.65e-07!235;DOID:0050615!8.78e-07!16;DOID:14566!8.87e-07!239 | ||
|ontology_enrichment_disease_v019=DOID:0050619;3.08e-14;1!DOID:1357;3.08e-14;1!DOID:1799;1.18e-13;1!DOID:10165;1.18e-13;1!DOID:1798;1.18e-13;1!DOID:5409;1.57e-13;4!DOID:0050615;6.35e-13;16!DOID:1324;3.92e-08;15!DOID:1325;4.05e-08;7!DOID:3904;4.05e-08;7 | |||
|ontology_enrichment_disease_v019_2=DOID:0050619,3.08e-14,1;DOID:1357,3.08e-14,1;DOID:1799,9.73e-14,1;DOID:10165,9.73e-14,1;DOID:1798,9.73e-14,1;DOID:5409,2.08e-13,4;DOID:0050615,7.19e-13,16;DOID:1324,4.32e-08,15;DOID:1325,4.75e-08,7;DOID:3904,4.75e-08,7 | |||
|ontology_enrichment_uberon=UBERON:0004119!1.28e-13!169;UBERON:0000925!1.28e-13!169;UBERON:0006595!1.28e-13!169;UBERON:0001007!1.63e-13!155;UBERON:0001555!1.63e-13!155;UBERON:0007026!1.63e-13!155;UBERON:0004921!5.79e-13!129;UBERON:0004185!5.79e-13!129;UBERON:0000077!2.38e-10!130;UBERON:0001041!5.33e-09!98;UBERON:0000002!4.81e-08!6;UBERON:0001560!4.81e-08!6;UBERON:0005911!1.27e-07!82;UBERON:0000344!2.99e-07!12;UBERON:0001004!6.03e-07!72 | |ontology_enrichment_uberon=UBERON:0004119!1.28e-13!169;UBERON:0000925!1.28e-13!169;UBERON:0006595!1.28e-13!169;UBERON:0001007!1.63e-13!155;UBERON:0001555!1.63e-13!155;UBERON:0007026!1.63e-13!155;UBERON:0004921!5.79e-13!129;UBERON:0004185!5.79e-13!129;UBERON:0000077!2.38e-10!130;UBERON:0001041!5.33e-09!98;UBERON:0000002!4.81e-08!6;UBERON:0001560!4.81e-08!6;UBERON:0005911!1.27e-07!82;UBERON:0000344!2.99e-07!12;UBERON:0001004!6.03e-07!72 | ||
|ontology_enrichment_uberon_v019=UBERON:0001764;3.08e-14;1!UBERON:0001825;3.08e-14;1!UBERON:0001052;1.14e-13;4!UBERON:0004907;4.01e-11;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001764,3.08e-14,1;UBERON:0001825,3.08e-14,1;UBERON:0001052,1.18e-13,4;UBERON:0004907,4.12e-11,5;UBERON:0004921,1.87e-07,118 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426730222566507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0,0,0.132529768321485,0.232387885739037,0.310983165046111,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,0,0,0.614942192715568,0,0.219500570817251,0,0,0.277765335475589,0,0,0,0,0,0,0,0,0.790204397959275,0,0,0,0,0.93733833986777,0.335964256397719,0,0.268675568108545,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.69203229428271,0.200506470303285,0.460404944679482,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0.574265537996172,0,0,0,0,0,0,0,0,0,0,0.495854746082934,0,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0.764637207142375,0,0,0,0,0,0,0.213648142254946,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47748896947538,0.296964680832639,1.22864280839693,0,0,0,0,0,0,0,0.503865495708552,0,0,0,0.0898683511473268,0,0,0,0,0,0,0,0,0.260427761085233,0,0,0,0.254253650292766,0.709163045303809,0.344743373241465,0,0,0,0,0,0.331737779793674,0,0.219385397153973,0.10893846351899,0.83654246567162,0.307801034015188,0,0.69169171316418,1.07709173291727,0.325942115766024,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,5.08871057162187,0,0,0.176915129006678,0,0,0,0,0,0,0,0,0.19566461893209,0,0,0,0,0,0,0.207376382794494,0,0,0,0,0,0,0,0.195984794828755,0,0,0,0,0.0730893170861856,0,1.06687918137261,0.529536760149002,0.451961481561065,0,0,0,0.195551382734803,0,0,0.19980960958213,0.432271251462318,0,0.171594997861965,0,0,3.29971648463514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.315132729228895,0.0824158583811665,0.674035438541849,0,0,0,0,0.482259445395058,0.275078873194468,0,0,0,0,0.670869375198532,0,0.0524545881349981,0,0.179287339332845,0,0,0,0,0,0,0,0,0,0,0,0.732761168390412,1.32506888912221,0,0,0,0,0,0,0,0,0,0,1.27668251554036,0,0,0,0,21.6734652825323,0,0,0,0,0.110929051536852,0,0,0,0,0,0,0,0.28984205722165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163565394255844,0,0,0,0,0,0,0,0,0.419638523158333,0.622077260032973,0,0,0,0,0,0,0,0,0,0,2.40171224485641,0,0,0,0,0,0,0,0,0,0,0.687034029507179,0.471878893390961,0,0,0,0,0,0,0,0,1.30953347240711,0,0,0,0,0,0,0,0,0,0,0.255524855279191,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0,0,2.24217730651031,0,0,0,0,0,1.51113852978563,0,0,0.414432328326074,0.17071847709395,0.691259661814092,0,0,0,0,0.22910686854405,0,0,0,0.098150233615243,0.243835849964539,0,0,0,0.485710993059139,0.701818390386317,0,0,12.6499611883635,0,1.05673990496671,0.385870790539723,0.218559560503957,0,0,0.235676547101626,0,0,0,0,0,0,0,0.357107877211315,0.352894871715692,0.160482733378337,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203977659483963,0,0,0,0,0.267964130156178,0,0,0.426467963801962,0,0,0.0620747142958579,0,0.12729431655633,0,1.30630048738177,0,0.336760265072938,0.215166616178029,0.332660356546013,0.244209805832924,0,0,0.179650404213174,0,0,0.813792356631477,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426730222566507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0,0,0.132529768321485,0.232387885739037,0.310983165046111,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,0,0,0.614942192715568,0,0.219500570817251,0,0,0.277765335475589,0,0,0,0,0,0,0,0,0.790204397959275,0,0,0,0,0.93733833986777,0.335964256397719,0,0.268675568108545,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.69203229428271,0.200506470303285,0.460404944679482,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0.574265537996172,0,0,0,0,0,0,0,0,0,0,0.495854746082934,0,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0.764637207142375,0,0,0,0,0,0,0.213648142254946,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47748896947538,0.296964680832639,1.22864280839693,0,0,0,0,0,0,0,0.503865495708552,0,0,0,0.0898683511473268,0,0,0,0,0,0,0,0,0.260427761085233,0,0,0,0.254253650292766,0.709163045303809,0.344743373241465,0,0,0,0,0,0.331737779793674,0,0.219385397153973,0.10893846351899,0.83654246567162,0.307801034015188,0,0.69169171316418,1.07709173291727,0.325942115766024,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,5.08871057162187,0,0,0.176915129006678,0,0,0,0,0,0,0,0,0.19566461893209,0,0,0,0,0,0,0.207376382794494,0,0,0,0,0,0,0,0.195984794828755,0,0,0,0,0.0730893170861856,0,1.06687918137261,0.529536760149002,0.451961481561065,0,0,0,0.195551382734803,0,0,0.19980960958213,0.432271251462318,0,0.171594997861965,0,0,3.29971648463514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.315132729228895,0.0824158583811665,0.674035438541849,0,0,0,0,0.482259445395058,0.275078873194468,0,0,0,0,0.670869375198532,0,0.0524545881349981,0,0.179287339332845,0,0,0,0,0,0,0,0,0,0,0,0.732761168390412,1.32506888912221,0,0,0,0,0,0,0,0,0,0,1.27668251554036,0,0,0,0,21.6734652825323,0,0,0,0,0.110929051536852,0,0,0,0,0,0,0,0.28984205722165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163565394255844,0,0,0,0,0,0,0,0,0.419638523158333,0.622077260032973,0,0,0,0,0,0,0,0,0,0,2.40171224485641,0,0,0,0,0,0,0,0,0,0,0.687034029507179,0.471878893390961,0,0,0,0,0,0,0,0,1.30953347240711,0,0,0,0,0,0,0,0,0,0,0.255524855279191,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0,0,2.24217730651031,0,0,0,0,0,1.51113852978563,0,0,0.414432328326074,0.17071847709395,0.691259661814092,0,0,0,0,0.22910686854405,0,0,0,0.098150233615243,0.243835849964539,0,0,0,0.485710993059139,0.701818390386317,0,0,12.6499611883635,0,1.05673990496671,0.385870790539723,0.218559560503957,0,0,0.235676547101626,0,0,0,0,0,0,0,0.357107877211315,0.352894871715692,0.160482733378337,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203977659483963,0,0,0,0,0.267964130156178,0,0,0.426467963801962,0,0,0.0620747142958579,0,0.12729431655633,0,1.30630048738177,0,0.336760265072938,0.215166616178029,0.332660356546013,0.244209805832924,0,0,0.179650404213174,0,0,0.813792356631477,0,0,0 | ||
|short_description=p8@PERP | |short_description=p8@PERP | ||
}} | }} |
Latest revision as of 04:41, 25 September 2015
Short description: | p8@PERP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_PERP_5end |
Coexpression cluster: | C127_maxillary_small_hepatoblastoma_hepatocellular_alveolar_colon_argyrophil |
Association with transcript: | -278bp_to_NM_022121, uc003qht.2_5end |
EntrezGene: | PERP |
HGNC: | 17637 |
UniProt: | Q96FX8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lung fibroblast | 5.15e-14 | 1 |
epithelial cell of large intestine | 1.05e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
maxillary sinus | 3.08e-14 | 1 |
paranasal sinus | 3.08e-14 | 1 |
rectum | 1.18e-13 | 4 |
lower digestive tract | 4.12e-11 | 5 |
subdivision of digestive tract | 1.87e-07 | 118 |
Ontology term | p-value | n |
---|---|---|
paranasal sinus cancer | 3.08e-14 | 1 |
maxillary sinus cancer | 3.08e-14 | 1 |
islet cell tumor | 9.73e-14 | 1 |
endocrine pancreas cancer | 9.73e-14 | 1 |
pancreatic endocrine carcinoma | 9.73e-14 | 1 |
lung small cell carcinoma | 2.08e-13 | 4 |
respiratory system cancer | 7.19e-13 | 16 |
lung cancer | 4.32e-08 | 15 |
bronchus cancer | 4.75e-08 | 7 |
bronchogenic carcinoma | 4.75e-08 | 7 |