FFCP PHASE1:Hg19::chr6:135526382..135526388,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr6:135526382..135526388,+ | |||
|coexpression_cluster_id=C1970 | |||
|description=CAGE_peak_at_chr6:135526382..135526388,+ | |description=CAGE_peak_at_chr6:135526382..135526388,+ | ||
|id=chr6:135526382..135526388,+ | |id=chr6:135526382..135526388,+ | ||
|ontology_enrichment_celltype=CL:0000988!2.70e-21!182;CL:0000037!2.30e-20!172;CL:0000566!2.30e-20!172;CL:0002032!3.73e-17!165;CL:0000837!3.73e-17!165;CL:0000763!4.59e-10!112;CL:0000049!4.59e-10!112;CL:0000542!1.60e-07!53;CL:0000051!1.60e-07!53;CL:0000080!3.17e-07!6;CL:0000838!7.46e-07!52 | |ontology_enrichment_celltype=CL:0000988!2.70e-21!182;CL:0000037!2.30e-20!172;CL:0000566!2.30e-20!172;CL:0002032!3.73e-17!165;CL:0000837!3.73e-17!165;CL:0000763!4.59e-10!112;CL:0000049!4.59e-10!112;CL:0000542!1.60e-07!53;CL:0000051!1.60e-07!53;CL:0000080!3.17e-07!6;CL:0000838!7.46e-07!52 | ||
|ontology_enrichment_celltype_v019=CL:0000763;8.26e-08;100!CL:0000037;6.12e-07;1!CL:0001024;6.12e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,1.02e-21,177;CL:0000037,7.89e-18,168;CL:0002032,1.34e-15,161;CL:0000837,1.34e-15,161;CL:0000763,3.00e-15,108;CL:0000049,3.00e-15,108;CL:0001024,7.73e-07,1 | |||
|ontology_enrichment_development_v019=CL:0000049;3.91e-07;108 | |||
|ontology_enrichment_disease=DOID:2531!2.38e-58!51;DOID:0060083!2.38e-58!51;DOID:1240!1.01e-53!39;DOID:8692!4.57e-45!31;DOID:0050686!2.92e-22!137;DOID:162!3.77e-16!235;DOID:14566!2.10e-15!239;DOID:1036!1.65e-13!8;DOID:0060058!1.98e-09!10 | |ontology_enrichment_disease=DOID:2531!2.38e-58!51;DOID:0060083!2.38e-58!51;DOID:1240!1.01e-53!39;DOID:8692!4.57e-45!31;DOID:0050686!2.92e-22!137;DOID:162!3.77e-16!235;DOID:14566!2.10e-15!239;DOID:1036!1.65e-13!8;DOID:0060058!1.98e-09!10 | ||
|ontology_enrichment_disease_v019=DOID:8692;2.21e-62;31!DOID:1240;3.79e-53;39!DOID:2531;7.94e-38;51!DOID:0060083;7.94e-38;51!DOID:1036;1.03e-17;8!DOID:225;2.30e-07;1!DOID:8552;6.12e-07;1!DOID:0050686;7.93e-07;137 | |||
|ontology_enrichment_disease_v019_2=DOID:1240,1.38e-67,39;DOID:8692,6.58e-64,31;DOID:2531,1.55e-60,51;DOID:0060083,1.55e-60,51;DOID:0050686,3.26e-19,137;DOID:1036,5.49e-18,8;DOID:162,3.67e-10,235;DOID:14566,7.64e-10,239;DOID:225,2.37e-07,1;DOID:8552,3.40e-07,1 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.376627918784408,0.152826811495903,0.0821005894499457,0.157421562627358,0,0,0,0,0,0,0.232401601740905,0.853015394924529,1.17440175733939,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0.790152254325231,0,0,0.205601498999509,0,0,0,0,0,0.589211814949674,0,0,0,0.260118695119756,0.493313713811028,0,0.289803085735052,0.14828656316206,0,1.04535523804977,0.113309342697566,0,0.34362744548263,0,0,0,0,0,0,1.24930726552346,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132957960518865,0.953962497221368,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.72995471815166,0,0,0,0,0,0,0.168584690078102,0,0,0,0,0,0,0.38474715694639,0,0,0,0,0,0,0,1.7658523976586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.790204397959275,0,0,0,0,0,0,0,0,0,0,0,0.352193736052904,0,0.432359860250884,0,0.063497894292169,0,0,0,0.102827492703324,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.431428401637234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114814448164607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0.261435451024901,0,0,0,0,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255897791311334,0,0,0,0,0,0,0,0,0,0,0.243713489631284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.557409525377156,0.721346064882224,1.13826949357463,1.4348364545594,0.997896857164083,0.191505370132367,5.08016598537319,6.16781686521655,3.36956613736151,2.28234679033192,2.35019843659535,0,0.169291777801603,3.85411380248879,5.44859209415828,1.70338495076131,3.09154810280188,0.921722292925374,1.11838053946208,0.834245708559542,2.14926904942244,0.835218521685727,1.23087398947712,0.270455678475983,0.99921590399346,1.4098700508785,0.18714054040822,0,0,0.557216921387392,0,0,0,0,0,0,0,1.15362711958732,0,0,0.552567831062295,0,0,0.123084805461069,0,0,0,7.67358555340308,0,0,0,0,0,0,0.260427761085233,0.0874599999961957,0,0,0,0,0.689486746482929,0.291604613383254,0,0,0.361789315876224,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.10966490978682,1.8837630767403,1.99454018280188,0.225595660617181,0.784250137270958,1.51039428278258,1.3282761290693,1.90723894776454,0,0,0,0,0.995261931078505,0.0884575645033392,0,2.37216902944498,1.97702302314405,1.77517314159274,0,0,0,0.729819156862664,0,0,0,1.20990716048664,0,0,0,0.103688191397247,0,0,0,0,0,0,0,0,0.0870592065804026,0,0.171986032471617,0,0.0730893170861856,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0.525774708558629,0,0,0,0,0,0,0,0,1.16495949527454,0,0,0.0674035438541849,0,0,0,0,0.160753148465019,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.903017728242729,0,0,0,0,0,0,0,0,0,0.157204305099666,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124980407962107,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176689145945881,0,0,0,0,0,0,0,0,0,0,0,0,0.39997479170986,3.09406016113009,0.172214979660816,0,0,0,0,0.127894371303652,0,0,0,0.169732529954025,0.212574920101683,0.123935764259002,0,0,4.25853423006768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.345701962667338,0,0,0,0,0,0,0.157115589916002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.098150233615243,0,0,0,0,0.485710993059139,0.701818390386317,0.994753875806841,0,0.33883824611688,0,0,0,0.218559560503957,0,0,0,0.196308467114945,0,0,0,0,0.0644578879735772,0.199882311849858,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253397002022874,0,0.26721740526556,0.0918948995348449,0,0,0,0,0,0.213233981900981,0,0.322944549180031,1.11734485732544,0,0,0,0,0,0.0673520530145875,0,0,0.0814032686109745,0,0,0,0,0.122241444182866,0,0,0.201273793591026,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.376627918784408,0.152826811495903,0.0821005894499457,0.157421562627358,0,0,0,0,0,0,0.232401601740905,0.853015394924529,1.17440175733939,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0.790152254325231,0,0,0.205601498999509,0,0,0,0,0,0.589211814949674,0,0,0,0.260118695119756,0.493313713811028,0,0.289803085735052,0.14828656316206,0,1.04535523804977,0.113309342697566,0,0.34362744548263,0,0,0,0,0,0,1.24930726552346,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132957960518865,0.953962497221368,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.72995471815166,0,0,0,0,0,0,0.168584690078102,0,0,0,0,0,0,0.38474715694639,0,0,0,0,0,0,0,1.7658523976586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.790204397959275,0,0,0,0,0,0,0,0,0,0,0,0.352193736052904,0,0.432359860250884,0,0.063497894292169,0,0,0,0.102827492703324,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.431428401637234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114814448164607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0.261435451024901,0,0,0,0,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255897791311334,0,0,0,0,0,0,0,0,0,0,0.243713489631284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.557409525377156,0.721346064882224,1.13826949357463,1.4348364545594,0.997896857164083,0.191505370132367,5.08016598537319,6.16781686521655,3.36956613736151,2.28234679033192,2.35019843659535,0,0.169291777801603,3.85411380248879,5.44859209415828,1.70338495076131,3.09154810280188,0.921722292925374,1.11838053946208,0.834245708559542,2.14926904942244,0.835218521685727,1.23087398947712,0.270455678475983,0.99921590399346,1.4098700508785,0.18714054040822,0,0,0.557216921387392,0,0,0,0,0,0,0,1.15362711958732,0,0,0.552567831062295,0,0,0.123084805461069,0,0,0,7.67358555340308,0,0,0,0,0,0,0.260427761085233,0.0874599999961957,0,0,0,0,0.689486746482929,0.291604613383254,0,0,0.361789315876224,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.10966490978682,1.8837630767403,1.99454018280188,0.225595660617181,0.784250137270958,1.51039428278258,1.3282761290693,1.90723894776454,0,0,0,0,0.995261931078505,0.0884575645033392,0,2.37216902944498,1.97702302314405,1.77517314159274,0,0,0,0.729819156862664,0,0,0,1.20990716048664,0,0,0,0.103688191397247,0,0,0,0,0,0,0,0,0.0870592065804026,0,0.171986032471617,0,0.0730893170861856,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0.525774708558629,0,0,0,0,0,0,0,0,1.16495949527454,0,0,0.0674035438541849,0,0,0,0,0.160753148465019,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.903017728242729,0,0,0,0,0,0,0,0,0,0.157204305099666,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124980407962107,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176689145945881,0,0,0,0,0,0,0,0,0,0,0,0,0.39997479170986,3.09406016113009,0.172214979660816,0,0,0,0,0.127894371303652,0,0,0,0.169732529954025,0.212574920101683,0.123935764259002,0,0,4.25853423006768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.345701962667338,0,0,0,0,0,0,0.157115589916002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.098150233615243,0,0,0,0,0.485710993059139,0.701818390386317,0.994753875806841,0,0.33883824611688,0,0,0,0.218559560503957,0,0,0,0.196308467114945,0,0,0,0,0.0644578879735772,0.199882311849858,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253397002022874,0,0.26721740526556,0.0918948995348449,0,0,0,0,0,0.213233981900981,0,0.322944549180031,1.11734485732544,0,0,0,0,0,0.0673520530145875,0,0,0.0814032686109745,0,0,0,0,0.122241444182866,0,0,0.201273793591026,0 | ||
|short_description=p@chr6:135526382..135526388,+ | |short_description=p@chr6:135526382..135526388,+ | ||
}} | }} |
Latest revision as of 19:47, 30 July 2015
Short description: | p@chr6:135526382..135526388, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:135526382..135526388, + |
Coexpression cluster: | C1970_biphenotypic_acute_non_chronic_myelodysplastic_cord_Hodgkin |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 1.02e-21 | 177 |
hematopoietic stem cell | 7.89e-18 | 168 |
hematopoietic oligopotent progenitor cell | 1.34e-15 | 161 |
hematopoietic multipotent progenitor cell | 1.34e-15 | 161 |
myeloid cell | 3.00e-15 | 108 |
common myeloid progenitor | 3.00e-15 | 108 |
CD34-positive, CD38-negative hematopoietic stem cell | 7.73e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
leukemia | 1.38e-67 | 39 |
myeloid leukemia | 6.58e-64 | 31 |
hematologic cancer | 1.55e-60 | 51 |
immune system cancer | 1.55e-60 | 51 |
organ system cancer | 3.26e-19 | 137 |
chronic leukemia | 5.49e-18 | 8 |
cancer | 3.67e-10 | 235 |
disease of cellular proliferation | 7.64e-10 | 239 |
syndrome | 2.37e-07 | 1 |
chronic myeloid leukemia | 3.40e-07 | 1 |