FFCP PHASE1:Hg19::chr6:130687599..130687610,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=114801 | |EntrezGene=114801 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=21075 | |HGNC=21075 | ||
|TSSclassifier=strong | |||
|UniProt=Q86VY9 | |UniProt=Q86VY9 | ||
|association_with_transcript=0bp_to_BC044246_5end | |association_with_transcript=0bp_to_BC044246_5end | ||
|cluster_id=chr6:130687599..130687610,+ | |||
|coexpression_cluster_id=C714 | |||
|description=CAGE_peak_9_at_TMEM200A_5end | |description=CAGE_peak_9_at_TMEM200A_5end | ||
|id=chr6:130687599..130687610,+ | |id=chr6:130687599..130687610,+ | ||
|ontology_enrichment_celltype=CL:0000055!3.97e-31!180;CL:0000187!1.58e-20!54;CL:0000680!2.29e-20!57;CL:0000056!2.29e-20!57;CL:0000355!2.29e-20!57;CL:0000192!5.36e-19!42;CL:0000514!5.36e-19!42;CL:0000393!1.30e-18!60;CL:0000211!1.30e-18!60;CL:0000183!2.44e-17!59;CL:0000359!2.48e-17!32;CL:0000057!2.09e-12!75;CL:0002620!8.69e-09!23;CL:0002539!1.71e-08!10;CL:0000034!8.34e-08!444;CL:0000723!3.63e-07!436;CL:0000048!6.57e-07!430;CL:0002334!7.15e-07!12 | |ontology_enrichment_celltype=CL:0000055!3.97e-31!180;CL:0000187!1.58e-20!54;CL:0000680!2.29e-20!57;CL:0000056!2.29e-20!57;CL:0000355!2.29e-20!57;CL:0000192!5.36e-19!42;CL:0000514!5.36e-19!42;CL:0000393!1.30e-18!60;CL:0000211!1.30e-18!60;CL:0000183!2.44e-17!59;CL:0000359!2.48e-17!32;CL:0000057!2.09e-12!75;CL:0002620!8.69e-09!23;CL:0002539!1.71e-08!10;CL:0000034!8.34e-08!444;CL:0000723!3.63e-07!436;CL:0000048!6.57e-07!430;CL:0002334!7.15e-07!12 | ||
|ontology_enrichment_celltype_v019=CL:0000359;2.90e-23;32!CL:0000192;1.64e-17;43!CL:0002334;2.68e-12;12!CL:1000306;3.04e-10;4!CL:0002547;3.04e-10;4!CL:0002539;5.10e-10;10!CL:0000187;6.09e-10;55!CL:0002594;1.28e-09;4!CL:0000393;9.71e-09;61!CL:0000211;9.71e-09;61!CL:0002595;2.32e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,1.46e-25,32;CL:0000192,1.47e-23,43;CL:0000514,1.47e-23,43;CL:0000187,1.17e-18,55;CL:0000680,2.54e-17,58;CL:0000056,2.54e-17,58;CL:0000355,2.54e-17,58;CL:0000393,4.05e-16,61;CL:0000211,4.05e-16,61;CL:0002334,8.30e-13,12;CL:1000306,2.29e-10,4;CL:0002547,2.29e-10,4;CL:0000034,4.00e-10,441;CL:0002539,4.39e-10,10;CL:0002594,6.27e-10,4;CL:0000048,6.32e-10,427;CL:0000723,1.52e-09,433;CL:0000222,1.45e-07,121;CL:0002595,2.54e-07,5;CL:0000057,3.88e-07,76 | |||
|ontology_enrichment_development_v019=CL:0000514;1.64e-17;43!CL:0000355;2.70e-08;58 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002385!3.71e-19!63;UBERON:0001015!3.71e-19!63;UBERON:0000383!3.71e-19!63;UBERON:0001134!1.29e-18!61;UBERON:0002036!1.29e-18!61;UBERON:0003082!1.29e-18!61;UBERON:0004290!1.33e-16!70;UBERON:0000914!2.45e-16!83;UBERON:0002329!2.45e-16!83;UBERON:0003077!2.45e-16!83;UBERON:0003059!2.45e-16!83;UBERON:0007282!2.45e-16!83;UBERON:0009618!2.45e-16!83;UBERON:0007285!2.45e-16!83;UBERON:0000486!6.88e-14!82;UBERON:0001637!3.41e-13!42;UBERON:0003509!3.41e-13!42;UBERON:0004572!3.41e-13!42;UBERON:0004573!1.69e-12!33;UBERON:0004571!1.69e-12!33;UBERON:0001135!3.98e-10!15;UBERON:0000475!7.23e-09!365;UBERON:0001981!8.63e-09!60;UBERON:0007500!8.63e-09!60;UBERON:0004537!8.63e-09!60;UBERON:0006965!8.63e-09!60;UBERON:0004237!1.71e-08!10;UBERON:0004695!1.71e-08!10;UBERON:0002111!1.71e-08!10;UBERON:0004178!1.71e-08!10;UBERON:0002049!3.75e-08!79;UBERON:0007798!3.75e-08!79;UBERON:0005256!6.08e-08!143;UBERON:0004872!2.82e-07!84;UBERON:0000055!9.68e-07!69 | |ontology_enrichment_uberon=UBERON:0002385!3.71e-19!63;UBERON:0001015!3.71e-19!63;UBERON:0000383!3.71e-19!63;UBERON:0001134!1.29e-18!61;UBERON:0002036!1.29e-18!61;UBERON:0003082!1.29e-18!61;UBERON:0004290!1.33e-16!70;UBERON:0000914!2.45e-16!83;UBERON:0002329!2.45e-16!83;UBERON:0003077!2.45e-16!83;UBERON:0003059!2.45e-16!83;UBERON:0007282!2.45e-16!83;UBERON:0009618!2.45e-16!83;UBERON:0007285!2.45e-16!83;UBERON:0000486!6.88e-14!82;UBERON:0001637!3.41e-13!42;UBERON:0003509!3.41e-13!42;UBERON:0004572!3.41e-13!42;UBERON:0004573!1.69e-12!33;UBERON:0004571!1.69e-12!33;UBERON:0001135!3.98e-10!15;UBERON:0000475!7.23e-09!365;UBERON:0001981!8.63e-09!60;UBERON:0007500!8.63e-09!60;UBERON:0004537!8.63e-09!60;UBERON:0006965!8.63e-09!60;UBERON:0004237!1.71e-08!10;UBERON:0004695!1.71e-08!10;UBERON:0002111!1.71e-08!10;UBERON:0004178!1.71e-08!10;UBERON:0002049!3.75e-08!79;UBERON:0007798!3.75e-08!79;UBERON:0005256!6.08e-08!143;UBERON:0004872!2.82e-07!84;UBERON:0000055!9.68e-07!69 | ||
|ontology_enrichment_uberon_v019=UBERON:0004573;3.12e-17;33!UBERON:0004571;3.12e-17;33!UBERON:0001637;4.83e-15;42!UBERON:0003509;4.83e-15;42!UBERON:0004572;4.83e-15;42!UBERON:0000947;6.31e-11;21!UBERON:0010191;6.31e-11;21!UBERON:0007500;2.69e-10;56!UBERON:0001981;2.69e-10;56!UBERON:0004537;2.69e-10;56!UBERON:0004797;3.04e-10;4!UBERON:0000415;3.04e-10;4!UBERON:0007240;3.04e-10;4!UBERON:0005742;3.04e-10;4!UBERON:0005734;3.04e-10;4!UBERON:0004664;3.04e-10;4!UBERON:0004663;3.04e-10;4!UBERON:0004237;5.10e-10;10!UBERON:0004695;5.10e-10;10!UBERON:0002111;5.10e-10;10!UBERON:0004178;5.10e-10;10!UBERON:0001310;1.28e-09;4!UBERON:0010260;1.18e-08;9!UBERON:0003688;2.77e-08;6!UBERON:0002358;2.77e-08;6!UBERON:0003684;2.77e-08;6!UBERON:0001178;2.77e-08;6!UBERON:0000055;1.27e-07;65!UBERON:0003834;2.32e-07;5!UBERON:0001533;2.32e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001637,9.17e-23,42;UBERON:0003509,9.17e-23,42;UBERON:0004572,9.17e-23,42;UBERON:0004573,4.54e-20,33;UBERON:0004571,4.54e-20,33;UBERON:0007500,2.83e-17,59;UBERON:0001981,2.83e-17,59;UBERON:0004537,2.83e-17,59;UBERON:0006965,2.83e-17,59;UBERON:0001134,9.59e-16,62;UBERON:0002036,9.59e-16,62;UBERON:0003082,9.59e-16,62;UBERON:0002385,4.94e-15,64;UBERON:0001015,4.94e-15,64;UBERON:0000383,4.94e-15,64;UBERON:0007524,8.64e-15,73;UBERON:0002329,4.00e-14,71;UBERON:0003059,4.00e-14,71;UBERON:0007282,4.00e-14,71;UBERON:0004290,4.00e-14,71;UBERON:0009618,4.00e-14,71;UBERON:0000055,4.78e-14,68;UBERON:0003077,7.91e-14,72;UBERON:0007285,7.91e-14,72;UBERON:0002049,1.97e-12,78;UBERON:0007798,1.97e-12,78;UBERON:0004872,2.03e-12,83;UBERON:0007503,3.21e-12,78;UBERON:0000486,4.58e-11,83;UBERON:0000947,4.97e-11,21;UBERON:0010191,4.97e-11,21;UBERON:0000415,2.29e-10,4;UBERON:0007240,2.29e-10,4;UBERON:0005742,2.29e-10,4;UBERON:0005734,2.29e-10,4;UBERON:0004664,2.29e-10,4;UBERON:0004663,2.29e-10,4;UBERON:0004237,4.39e-10,10;UBERON:0004695,4.39e-10,10;UBERON:0002111,4.39e-10,10;UBERON:0004178,4.39e-10,10;UBERON:0001310,6.27e-10,4;UBERON:0010260,1.02e-08,9;UBERON:0004535,1.55e-08,109;UBERON:0001009,4.02e-08,112;UBERON:0003688,5.37e-08,6;UBERON:0002358,5.37e-08,6;UBERON:0003684,5.37e-08,6;UBERON:0001178,5.37e-08,6;UBERON:0003834,2.54e-07,5;UBERON:0001533,2.54e-07,5;UBERON:0003914,8.01e-07,117;UBERON:0005256,9.85e-07,122 | |||
|phase1_expression=1.63510541343501,0.856402095563933,1.26858963686374,1.0007329835313,0.446961094427288,0.872338524100369,0,0,0,0,0,0,0,0.123766352960047,0,1.34465029290355,0.602694528023977,1.46062018077475,0.487932798790507,0.123121058076788,0,0,0,0.136874425072884,0.125542639594803,0,0.0821005894499457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,1.12101712596307,0,0,0,0,0,0,0,0,0.222820913770347,0,0,0,0,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,0,1.50401373190767,0.144846518960824,0,0,0.472674085820339,0.886917589850256,0.966182642624386,0.916853528483988,0,0,0,0.174129737299267,0,0,0,0,0,0,0,0,0,0,0,0,0.35576626268671,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0,1.49091585508596,3.92554586160197,3.44263870114369,5.16305917347865,2.83734705758686,0.560677600142307,0,0.49333509683432,0,0,0.163461903113459,0.151357427644931,0.576175924479999,0.468642863667593,0.312160076830321,0,1.49448680551801,0.23486899728753,0,0,0,0.245668634623536,0,0,0.494533858557114,0,0,0,0.250237039743928,0,0.438977620880838,0,0.45071417671979,0.226864366320042,2.51145489964407,1.70845911054854,0.423863802319124,0.900273288253207,0.515262646192195,0.257640540045629,1.30281799432113,3.03797398034279,0.974370051611986,0.504867548488229,0.828449087780694,0.969876340912871,1.06502877754984,0.906768884048762,0.508681776931463,0.966304265816484,0.545492241181669,0,0,0,0.116193942869518,0.10366105501537,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,1.20097467208968,0.329250856225877,0,0.804231779293047,0.277765335475589,0,0,0,0.463721619900307,2.23076519048061,0,0,0,0,0,0,0,0,0,0.335964256397719,0.425325291727159,0.447792613514241,0,0.383382679165211,0,0,0.414656231081544,0,0,0,0,0,0,0.102827492703324,0,0,0.112131084345361,0.43596006883328,1.3200891447771,7.88557466122444,0,0,4.5209479819428,3.12022310734098,0,1.41849132023278,0.266422179016099,0,0,0,0,0,0,2.1100756394171,0.871533458600294,1.3996218765488,0,0,0,0.239624855491583,0,2.85273810081437,0.144781306667579,0,0.358121926479791,0,0,0,0,0.76228387266739,0,0,0.167516265334349,0.637938751653163,0,0,0,0.24538298343828,0,0.542530047399471,0.415941723061614,0.178428988797162,0,0.117141414992713,0.601892199455438,6.82222512167955,0,2.65690239414175,3.68738337083406,0.955719759148911,0,0,0,0,0,0,0,0,1.48864684691266,2.455391572609,0,1.28139149255701,1.02341449813341,1.93024705372329,0,1.69630663182921,1.9531789784444,0.657017248110473,1.55776328755086,1.62694529843943,0.604297247958111,0,0,1.26295892981067,1.45672934405374,0.786746489756545,0,0.231046011313244,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0.256450125116389,0.328014645699706,0,0.103041011647722,0,0,0,0,0,0.773365746336976,0.308097234229289,0.15350367472613,0.137836572484531,0.107420244868274,0.145016693914229,0.0852266274161009,0.356128142586949,0,0,0,0,1.85938219718914,9.12955805808856,2.7881490806424,0.616067160352178,1.06461206063404,4.34966496037536,4.633105477598,0.429374660225974,0,0,0.38126038784765,0,0.855877976067841,2.54562598340749,0,0.359744915166629,0.823611089208164,0.706874414074119,1.61745985258653,1.58510321173008,0.421258456238981,0,4.38684281336312,1.05650146756755,1.9109987597118,1.1312434556297,0,2.2054613741845,0.66343897524122,1.75380354101505,0,0.655894752046633,3.44947640836597,2.478587984798,1.97186921772569,3.29846110069318,1.08073945114433,3.5667105148125,4.25713276884717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191505370132367,0,0,0,0,0,0,0.338583555603207,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422008249231538,0.556543525114529,0,0,0,0,0.503865495708552,3.37486652257111,0,2.17727711363265,0,0,0,0.394573622547734,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0.384751292518985,0.455768223388005,0,0,0,0,1.19076871422421,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0.424059214301822,0,0,0.0884575645033392,0.611030144933625,0,0,0,0,0,0,0,0,0,0,0,0,0.31593289814244,0,0,0,0,0,0,0,0,0,0,0,0.698906672968121,0,0,0,0,0,0,0.677942222341597,1.09633539717401,0.993573058514948,0,0,0.240476460754601,0,0.39961921916426,0,0,0,0,1.36677789121976,0,0.135904206073614,0,0,0.288950589901519,0,0,0,1.71906176567983,0,0,0,0,0,0,0,0,0.720599767084807,0,0,0,0,0,0,0.795229689809303,0.272406812223151,0,0,0,0.2249738915515,0,0.242998226632099,0,0.551639951094387,0.681909645754975,1.47840471127169,0,0.575745591958336,0,0,0,2.17199840701485,4.32110745600634,0.979762080328227,0,0.246277562248017,2.3854323049959,0.453248366080503,0,0,0,0,0,0,0.213574825135389,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0.597019211547496,0.233713309847224,2.21922344601045,0.947015026375446,1.25783950876288,0.889811221596536,0.228840068396924,3.17584939902802,1.08806040407946,0.591420599958536,2.54874827461924,0,1.08684069813382,0.829412415681711,7.44356800762386,3.65221543268214,0.6010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| ||
|short_description=p9@TMEM200A | |short_description=p9@TMEM200A | ||
}} | }} |
Latest revision as of 17:38, 24 September 2015
Short description: | p9@TMEM200A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_TMEM200A_5end |
Coexpression cluster: | C714_Smooth_Fibroblast_Mesenchymal_mesenchymal_Myoblast_leiomyoma_Preadipocyte |
Association with transcript: | 0bp_to_BC044246_5end |
EntrezGene: | TMEM200A |
HGNC: | 21075 |
UniProt: | Q86VY9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 1.46e-25 | 32 |
smooth muscle cell | 1.47e-23 | 43 |
smooth muscle myoblast | 1.47e-23 | 43 |
muscle cell | 1.17e-18 | 55 |
muscle precursor cell | 2.54e-17 | 58 |
myoblast | 2.54e-17 | 58 |
multi-potent skeletal muscle stem cell | 2.54e-17 | 58 |
electrically responsive cell | 4.05e-16 | 61 |
electrically active cell | 4.05e-16 | 61 |
preadipocyte | 8.30e-13 | 12 |
fibroblast of tunica adventitia of artery | 2.29e-10 | 4 |
fibroblast of the aortic adventitia | 2.29e-10 | 4 |
stem cell | 4.00e-10 | 441 |
aortic smooth muscle cell | 4.39e-10 | 10 |
smooth muscle cell of the umbilical artery | 6.27e-10 | 4 |
multi fate stem cell | 6.32e-10 | 427 |
somatic stem cell | 1.52e-09 | 433 |
mesodermal cell | 1.45e-07 | 121 |
smooth muscle cell of the subclavian artery | 2.54e-07 | 5 |
fibroblast | 3.88e-07 | 76 |