FFCP PHASE1:Hg19::chr6:118869482..118869497,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5350 | |EntrezGene=5350 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9080 | |HGNC=9080 | ||
|TSSclassifier=strong | |||
|UniProt=P26678 | |UniProt=P26678 | ||
|association_with_transcript=21bp_to_ENST00000357525_5end | |association_with_transcript=21bp_to_ENST00000357525_5end | ||
|cluster_id=chr6:118869482..118869497,+ | |||
|coexpression_cluster_id=C188 | |||
|description=CAGE_peak_2_at_PLN_5end | |description=CAGE_peak_2_at_PLN_5end | ||
|id=chr6:118869482..118869497,+ | |id=chr6:118869482..118869497,+ | ||
|ontology_enrichment_celltype=CL:0000136!1.07e-08!15 | |ontology_enrichment_celltype=CL:0000136!1.07e-08!15 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006603;1.71e-10;65 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.99e-52!115;UBERON:0001049!1.24e-14!57;UBERON:0005068!1.24e-14!57;UBERON:0006241!1.24e-14!57;UBERON:0007135!1.24e-14!57;UBERON:0003075!1.31e-12!86;UBERON:0007284!1.31e-12!86;UBERON:0001017!7.26e-12!82;UBERON:0002346!1.81e-11!90;UBERON:0005743!2.18e-11!86;UBERON:0002616!7.62e-11!59;UBERON:0000955!1.09e-10!69;UBERON:0006238!1.09e-10!69;UBERON:0003080!4.12e-10!42;UBERON:0000073!1.07e-09!94;UBERON:0001016!1.07e-09!94;UBERON:0002780!2.12e-09!41;UBERON:0001890!2.12e-09!41;UBERON:0006240!2.12e-09!41;UBERON:0001893!2.17e-09!34;UBERON:0000025!3.22e-09!194;UBERON:0004111!3.50e-09!241;UBERON:0000062!6.61e-09!511;UBERON:0000477!6.68e-09!286;UBERON:0002791!6.84e-09!33;UBERON:0007100!6.87e-09!27;UBERON:0002020!1.86e-08!34;UBERON:0003528!1.86e-08!34;UBERON:0001869!2.00e-08!32;UBERON:0000468!2.32e-08!659;UBERON:0000475!3.80e-08!365;UBERON:0000153!1.97e-07!129;UBERON:0007811!1.97e-07!129;UBERON:0000481!2.36e-07!347;UBERON:0000467!2.37e-07!625;UBERON:0000480!2.83e-07!626;UBERON:0003103!3.82e-07!69;UBERON:0003056!6.51e-07!61 | |ontology_enrichment_uberon=UBERON:0007023!2.99e-52!115;UBERON:0001049!1.24e-14!57;UBERON:0005068!1.24e-14!57;UBERON:0006241!1.24e-14!57;UBERON:0007135!1.24e-14!57;UBERON:0003075!1.31e-12!86;UBERON:0007284!1.31e-12!86;UBERON:0001017!7.26e-12!82;UBERON:0002346!1.81e-11!90;UBERON:0005743!2.18e-11!86;UBERON:0002616!7.62e-11!59;UBERON:0000955!1.09e-10!69;UBERON:0006238!1.09e-10!69;UBERON:0003080!4.12e-10!42;UBERON:0000073!1.07e-09!94;UBERON:0001016!1.07e-09!94;UBERON:0002780!2.12e-09!41;UBERON:0001890!2.12e-09!41;UBERON:0006240!2.12e-09!41;UBERON:0001893!2.17e-09!34;UBERON:0000025!3.22e-09!194;UBERON:0004111!3.50e-09!241;UBERON:0000062!6.61e-09!511;UBERON:0000477!6.68e-09!286;UBERON:0002791!6.84e-09!33;UBERON:0007100!6.87e-09!27;UBERON:0002020!1.86e-08!34;UBERON:0003528!1.86e-08!34;UBERON:0001869!2.00e-08!32;UBERON:0000468!2.32e-08!659;UBERON:0000475!3.80e-08!365;UBERON:0000153!1.97e-07!129;UBERON:0007811!1.97e-07!129;UBERON:0000481!2.36e-07!347;UBERON:0000467!2.37e-07!625;UBERON:0000480!2.83e-07!626;UBERON:0003103!3.82e-07!69;UBERON:0003056!6.51e-07!61 | ||
|ontology_enrichment_uberon_v019=UBERON:0007023;7.01e-12;114!UBERON:0007100;4.77e-11;25!UBERON:0004151;1.80e-07;3!UBERON:0003978;2.08e-07;3!UBERON:0000946;2.08e-07;3!UBERON:0000948;2.46e-07;22!UBERON:0006947;8.74e-07;3!UBERON:0004054;8.74e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,4.66e-46,114;UBERON:0003103,3.56e-10,68;UBERON:0007100,5.40e-10,27;UBERON:0004151,1.80e-07,3;UBERON:0003978,2.08e-07,3;UBERON:0009751,2.08e-07,3;UBERON:0000946,2.08e-07,3;UBERON:0002523,2.08e-07,3;UBERON:0005983,2.08e-07,3;UBERON:0002165,2.08e-07,3;UBERON:0002062,2.08e-07,3;UBERON:0007280,2.08e-07,3;UBERON:0006947,8.84e-07,3;UBERON:0004054,8.84e-07,3 | |||
|phase1_expression=0.181678379270557,0.214100523890983,1.69145284915165,3.00219895059391,3.12872766099101,1.74467704820074,17.7309914717817,0,0,0,0,0,0,0,0,0,0,0,0.487932798790507,0.369363174230364,0,1.25381888591235,0.572471974262113,0,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393010762749165,0,0,0,0,0,0,0,0,0,0,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,0,0,0,0,0,0.0945348171640679,0.221729397462564,0.263504357079378,4.25681995367566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0.286836620748814,0,66.7206344169345,0,1.48000529050296,20.2287173009848,0.134710672069688,0.326923806226917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600182192168805,0,0,0.18611685633159,0,0.68205903612839,0,0.184099797284599,0,0,0.302256294682921,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.761974731506028,0,0,0,0,0,0,0.112131084345361,0,0,0,0,0,0.797814349754612,0,0,0,0,0,0,0,0,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0.128139149255701,3.58195074346692,0.160853921143607,0,0,0,0.164254312027618,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270946437543853,0,0,0,0,0,0,0,0,0,8.3463219434655,0,0,0,0,0,0.096670718292122,0,0,0,0,0,0,0.534192213880424,0,0,0,0,0,0,0,0.308033580176089,0,0,3.33583594387056,1.28812398067792,0,0,0,0,0,0,0,0.539617372749944,0,0,0.202182481573316,1.58510321173008,0,0,0.731140468893853,0,0.9554993798559,0,0,0,0,0.438450885253763,0,0,3.85529716229138,1.239293992399,0.281695602532241,0,0,1.426684205925,0.709522128141196,0,0,0,0,0,0,0,7.81393546447267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,26.224964089669,0,0,0,0,0,0,0.994147647766298,0.140669416410513,0,0,0,132.898408163464,7.73594963487214,0,11.9654358527521,0,1.86623752597084,0,0,0,66.2883685880194,0,0,0.969332746095218,2.13366625772258,0,0,0,15.9499906595655,0,0,0,0,0,0,0,0.241192877250816,0,0.221158519862449,0,13.3825092263923,0,0.139423744278603,50.4793695784909,0,0,0,0,0,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0,0,0,12.9384051040206,41.3096826230594,31.1625373916149,0,0,0,0.269604531922708,16.0515529459758,0,0,0,0,21.3075577538671,7.25944296291983,0,10.362599059072,0,0,0,0,0,0,0,0,0,0,0,62.2026938941627,0,0,0,0,46.3607498814645,0,5.87549926029384,0,0,1.83601308272048,0,0,111.209010259203,0,0,0,0.857974989309823,0,0,0,0,0,0,0.288950589901519,1.80126086612937,0.136905378891993,0,0.859530882839914,0,363.904968857747,637.524299600504,58.1477149907219,28.3544180708567,101.297347360231,629.120338528639,934.858019652796,5.76479813667846,0,0,0,0,0,0.0846733320657845,0,0.953423842781029,0,0,0,0,0,0.364497339948148,0,18.67695262991,2.57027481861491,0,0,0,1342.19782292918,680.630545535664,0,4.3439968140297,3.45688596480507,8.49127136284464,0,0.082092520749339,0,0,0.732761168390412,0,0.258565912723101,0,0,0,19.6488839124558,43.0739795973085,4.14239055347196,2.48083010905975,0,0,0,0.544017803369474,1.5041393641362,0.612691153526923,1.31149052283922,0,0,0.244052529803926,0.3755727921195,3.44045517414043,1.22021956690538,1.4903136705932,0,0,373.66342562262,0,0,0,0,0,0,0,0,0.50313580350515,0,0,0,0,0,0.955780602982214,0,2.32894435314389,0,0.53168342911599,2.60872530905867,0,0,0.406870733204662,1.63663793282303,0,0,3.18476710958893,0,1.03018711554838,0.336749488765919,169.087763626392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19998739585493,0,0,0,0,0,0,0,0,0,0.109209638192014,0,0,0,0,0,0,0,0,0,1.22035527683273,1.41696576325585,0,0.205116364240755,0,0.207471757392654,3.87541549516443,0,0,0,0,0,0,0,0,46.4047725914917,0,0,0,0,0,0.472763092328763,0,0,0.443910671357348,0.546974809018219,2.74128883428591,120.083105170209,0,0,1.07140367175657,6.38939072215766,0,0,0.620916591138472,0,0,1.01954599465248,0.197318320688547,0,0,31.4757302330561,0.314231179832004,0,19.1763331306994,0,0,0.214429632529969,0,0,0,0,0,0,0,0.860454717640555,0,0,11.854837405346,0,0,0,0,0,0,65.3903125559774,82.4382339055663,3.4794432940146,10.1999308542419,0,0,0,0,0,0,32.9533655120924,7.6495846176385,0,50.7457026030584,0,4.12247780941385,1.78227840196252,0.8453114551668,0,1.03382309777839,0.773494655682926,0,0,0,0,6.57302749421866,3.66983426723633,0.573358332605805,0.631086248772738,0.203974470572744,0.436350690340377,7.40637576721561,0,0,0,0,0,0,0,0,0,0,42.1329562093411,1.33982065078089,0,0.310298987585686,50.5364537105325,5.23741749220229,0.322944549180031,0.682821857254437,0,5.34636129536585,2.62752345645685,41.1484653525257,10.2669990325584,1.34704106029175,16.0657740079595,6.98586748746628,0,0,0,0,35.1961413605181,43.2734712407347,15.8689509543138,9.32059483859718,23.146486262968,0 | |phase1_expression=0.181678379270557,0.214100523890983,1.69145284915165,3.00219895059391,3.12872766099101,1.74467704820074,17.7309914717817,0,0,0,0,0,0,0,0,0,0,0,0.487932798790507,0.369363174230364,0,1.25381888591235,0.572471974262113,0,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393010762749165,0,0,0,0,0,0,0,0,0,0,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,0,0,0,0,0,0.0945348171640679,0.221729397462564,0.263504357079378,4.25681995367566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0.286836620748814,0,66.7206344169345,0,1.48000529050296,20.2287173009848,0.134710672069688,0.326923806226917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600182192168805,0,0,0.18611685633159,0,0.68205903612839,0,0.184099797284599,0,0,0.302256294682921,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.761974731506028,0,0,0,0,0,0,0.112131084345361,0,0,0,0,0,0.797814349754612,0,0,0,0,0,0,0,0,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0.128139149255701,3.58195074346692,0.160853921143607,0,0,0,0.164254312027618,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270946437543853,0,0,0,0,0,0,0,0,0,8.3463219434655,0,0,0,0,0,0.096670718292122,0,0,0,0,0,0,0.534192213880424,0,0,0,0,0,0,0,0.308033580176089,0,0,3.33583594387056,1.28812398067792,0,0,0,0,0,0,0,0.539617372749944,0,0,0.202182481573316,1.58510321173008,0,0,0.731140468893853,0,0.9554993798559,0,0,0,0,0.438450885253763,0,0,3.85529716229138,1.239293992399,0.281695602532241,0,0,1.426684205925,0.709522128141196,0,0,0,0,0,0,0,7.81393546447267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,26.224964089669,0,0,0,0,0,0,0.994147647766298,0.140669416410513,0,0,0,132.898408163464,7.73594963487214,0,11.9654358527521,0,1.86623752597084,0,0,0,66.2883685880194,0,0,0.969332746095218,2.13366625772258,0,0,0,15.9499906595655,0,0,0,0,0,0,0,0.241192877250816,0,0.221158519862449,0,13.3825092263923,0,0.139423744278603,50.4793695784909,0,0,0,0,0,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0,0,0,12.9384051040206,41.3096826230594,31.1625373916149,0,0,0,0.269604531922708,16.0515529459758,0,0,0,0,21.3075577538671,7.25944296291983,0,10.362599059072,0,0,0,0,0,0,0,0,0,0,0,62.2026938941627,0,0,0,0,46.3607498814645,0,5.87549926029384,0,0,1.83601308272048,0,0,111.209010259203,0,0,0,0.857974989309823,0,0,0,0,0,0,0.288950589901519,1.80126086612937,0.136905378891993,0,0.859530882839914,0,363.904968857747,637.524299600504,58.1477149907219,28.3544180708567,101.297347360231,629.120338528639,934.858019652796,5.76479813667846,0,0,0,0,0,0.0846733320657845,0,0.953423842781029,0,0,0,0,0,0.364497339948148,0,18.67695262991,2.57027481861491,0,0,0,1342.19782292918,680.630545535664,0,4.3439968140297,3.45688596480507,8.49127136284464,0,0.082092520749339,0,0,0.732761168390412,0,0.258565912723101,0,0,0,19.6488839124558,43.0739795973085,4.14239055347196,2.48083010905975,0,0,0,0.544017803369474,1.5041393641362,0.612691153526923,1.31149052283922,0,0,0.244052529803926,0.3755727921195,3.44045517414043,1.22021956690538,1.4903136705932,0,0,373.66342562262,0,0,0,0,0,0,0,0,0.50313580350515,0,0,0,0,0,0.955780602982214,0,2.32894435314389,0,0.53168342911599,2.60872530905867,0,0,0.406870733204662,1.63663793282303,0,0,3.18476710958893,0,1.03018711554838,0.336749488765919,169.087763626392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19998739585493,0,0,0,0,0,0,0,0,0,0.109209638192014,0,0,0,0,0,0,0,0,0,1.22035527683273,1.41696576325585,0,0.205116364240755,0,0.207471757392654,3.87541549516443,0,0,0,0,0,0,0,0,46.4047725914917,0,0,0,0,0,0.472763092328763,0,0,0.443910671357348,0.546974809018219,2.74128883428591,120.083105170209,0,0,1.07140367175657,6.38939072215766,0,0,0.620916591138472,0,0,1.01954599465248,0.197318320688547,0,0,31.4757302330561,0.314231179832004,0,19.1763331306994,0,0,0.214429632529969,0,0,0,0,0,0,0,0.860454717640555,0,0,11.854837405346,0,0,0,0,0,0,65.3903125559774,82.4382339055663,3.4794432940146,10.1999308542419,0,0,0,0,0,0,32.9533655120924,7.6495846176385,0,50.7457026030584,0,4.12247780941385,1.78227840196252,0.8453114551668,0,1.03382309777839,0.773494655682926,0,0,0,0,6.57302749421866,3.66983426723633,0.573358332605805,0.631086248772738,0.203974470572744,0.436350690340377,7.40637576721561,0,0,0,0,0,0,0,0,0,0,42.1329562093411,1.33982065078089,0,0.310298987585686,50.5364537105325,5.23741749220229,0.322944549180031,0.682821857254437,0,5.34636129536585,2.62752345645685,41.1484653525257,10.2669990325584,1.34704106029175,16.0657740079595,6.98586748746628,0,0,0,0,35.1961413605181,43.2734712407347,15.8689509543138,9.32059483859718,23.146486262968,0 | ||
|short_description=p2@PLN | |short_description=p2@PLN | ||
}} | }} |
Latest revision as of 02:37, 20 September 2015
Short description: | p2@PLN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_PLN_5end |
Coexpression cluster: | C188_left_heart_tongue_skeletal_Skeletal_diaphragm_throat |
Association with transcript: | 21bp_to_ENST00000357525_5end |
EntrezGene: | PLN |
HGNC: | 9080 |
UniProt: | P26678 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 4.66e-46 | 114 |
compound organ | 3.56e-10 | 68 |
primary circulatory organ | 5.40e-10 | 27 |
cardiac chamber | 1.80e-07 | 3 |
valve | 2.08e-07 | 3 |
cardiac mesenchyme | 2.08e-07 | 3 |
cardial valve | 2.08e-07 | 3 |
tunica intima | 2.08e-07 | 3 |
heart layer | 2.08e-07 | 3 |
endocardium | 2.08e-07 | 3 |
endocardial cushion | 2.08e-07 | 3 |
presumptive endocardium | 2.08e-07 | 3 |
male genital duct | 8.84e-07 | 3 |
internal male genitalia | 8.84e-07 | 3 |