FFCP PHASE1:Hg19::chr6:112194622..112194662,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2534 | |EntrezGene=2534 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4037 | |HGNC=4037 | ||
|TSSclassifier=strong | |||
|UniProt=Q5R3A8,P06241,E5RFM0 | |UniProt=Q5R3A8,P06241,E5RFM0 | ||
|association_with_transcript=0bp_to_ENST00000229470,ENST00000354650,ENST00000356013,ENST00000368678,ENST00000523238,NM_002037,uc003pvk.2_5end | |association_with_transcript=0bp_to_ENST00000229470,ENST00000354650,ENST00000356013,ENST00000368678,ENST00000523238,NM_002037,uc003pvk.2_5end | ||
|cluster_id=chr6:112194622..112194662,- | |||
|description=CAGE_peak_1_at_FYN_5end | |description=CAGE_peak_1_at_FYN_5end | ||
|id=chr6:112194622..112194662,- | |id=chr6:112194622..112194662,- | ||
|ontology_enrichment_celltype=CL:0002057!3.88e-15!42;CL:0000860!2.19e-13!45;CL:0000791!2.39e-12!18;CL:0000789!2.39e-12!18;CL:0002420!2.39e-12!18;CL:0002419!2.39e-12!18;CL:0000790!2.39e-12!18;CL:0000738!3.34e-10!140;CL:0002031!4.22e-09!124;CL:0002087!1.11e-08!119;CL:0000625!4.62e-08!11;CL:0000084!5.61e-08!25;CL:0000827!5.61e-08!25 | |ontology_enrichment_celltype=CL:0002057!3.88e-15!42;CL:0000860!2.19e-13!45;CL:0000791!2.39e-12!18;CL:0000789!2.39e-12!18;CL:0002420!2.39e-12!18;CL:0002419!2.39e-12!18;CL:0000790!2.39e-12!18;CL:0000738!3.34e-10!140;CL:0002031!4.22e-09!124;CL:0002087!1.11e-08!119;CL:0000625!4.62e-08!11;CL:0000084!5.61e-08!25;CL:0000827!5.61e-08!25 | ||
|ontology_enrichment_celltype_v019=CL:0000791;2.37e-12;18!CL:0000789;2.37e-12;18!CL:0002419;2.37e-12;18!CL:0000860;1.19e-09;33!CL:0002057;1.19e-09;33!CL:0000625;4.58e-08;11!CL:0000084;5.35e-08;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,3.87e-15,42;CL:0002057,3.87e-15,42;CL:0000791,2.39e-12,18;CL:0000789,2.39e-12,18;CL:0002420,2.39e-12,18;CL:0002419,2.39e-12,18;CL:0000790,2.39e-12,18;CL:0000738,7.76e-11,136;CL:0002031,9.82e-10,120;CL:0000473,1.09e-09,48;CL:0000234,1.09e-09,48;CL:0002087,2.61e-09,115;CL:0000625,4.62e-08,11;CL:0000084,5.47e-08,25;CL:0000827,5.47e-08,25;CL:0000557,5.78e-07,67 | |||
|ontology_enrichment_development_v019=CL:0000790;2.37e-12;18!CL:0002057;5.50e-11;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.35e-16!57;UBERON:0005068!1.35e-16!57;UBERON:0006241!1.35e-16!57;UBERON:0007135!1.35e-16!57;UBERON:0002616!9.96e-15!59;UBERON:0000073!1.76e-14!94;UBERON:0001016!1.76e-14!94;UBERON:0001017!2.06e-14!82;UBERON:0005743!8.11e-14!86;UBERON:0002780!1.71e-12!41;UBERON:0001890!1.71e-12!41;UBERON:0006240!1.71e-12!41;UBERON:0001893!2.18e-12!34;UBERON:0003080!2.57e-12!42;UBERON:0002020!3.43e-12!34;UBERON:0003528!3.43e-12!34;UBERON:0000955!3.85e-12!69;UBERON:0006238!3.85e-12!69;UBERON:0002193!4.32e-12!112;UBERON:0002791!5.24e-12!33;UBERON:0001869!1.72e-11!32;UBERON:0007023!2.52e-11!115;UBERON:0003075!3.27e-11!86;UBERON:0007284!3.27e-11!86;UBERON:0002390!5.77e-11!102;UBERON:0003061!5.77e-11!102;UBERON:0002346!3.13e-10!90;UBERON:0000956!6.34e-09!25;UBERON:0000203!6.34e-09!25;UBERON:0002619!4.62e-08!22;UBERON:0003056!7.76e-08!61;UBERON:0003081!1.22e-07!216;UBERON:0001950!3.08e-07!20;UBERON:0004121!8.20e-07!169 | |ontology_enrichment_uberon=UBERON:0001049!1.35e-16!57;UBERON:0005068!1.35e-16!57;UBERON:0006241!1.35e-16!57;UBERON:0007135!1.35e-16!57;UBERON:0002616!9.96e-15!59;UBERON:0000073!1.76e-14!94;UBERON:0001016!1.76e-14!94;UBERON:0001017!2.06e-14!82;UBERON:0005743!8.11e-14!86;UBERON:0002780!1.71e-12!41;UBERON:0001890!1.71e-12!41;UBERON:0006240!1.71e-12!41;UBERON:0001893!2.18e-12!34;UBERON:0003080!2.57e-12!42;UBERON:0002020!3.43e-12!34;UBERON:0003528!3.43e-12!34;UBERON:0000955!3.85e-12!69;UBERON:0006238!3.85e-12!69;UBERON:0002193!4.32e-12!112;UBERON:0002791!5.24e-12!33;UBERON:0001869!1.72e-11!32;UBERON:0007023!2.52e-11!115;UBERON:0003075!3.27e-11!86;UBERON:0007284!3.27e-11!86;UBERON:0002390!5.77e-11!102;UBERON:0003061!5.77e-11!102;UBERON:0002346!3.13e-10!90;UBERON:0000956!6.34e-09!25;UBERON:0000203!6.34e-09!25;UBERON:0002619!4.62e-08!22;UBERON:0003056!7.76e-08!61;UBERON:0003081!1.22e-07!216;UBERON:0001950!3.08e-07!20;UBERON:0004121!8.20e-07!169 | ||
|ontology_enrichment_uberon_v019=UBERON:0001893;7.59e-11;34!UBERON:0003528;1.52e-10;34!UBERON:0002020;1.52e-10;34!UBERON:0002791;1.80e-10;32!UBERON:0001869;2.08e-10;32!UBERON:0000073;1.36e-09;53!UBERON:0002616;1.36e-09;53!UBERON:0002780;1.97e-09;41!UBERON:0001890;1.97e-09;41!UBERON:0000956;6.41e-09;25!UBERON:0000203;6.41e-09;25!UBERON:0002619;4.60e-08;22!UBERON:0001950;3.06e-07;20!UBERON:0001017;3.98e-07;75 | |||
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| ||
|short_description=p1@FYN | |short_description=p1@FYN | ||
}} | }} |
Latest revision as of 21:41, 19 September 2015
Short description: | p1@FYN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_FYN_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000229470, ENST00000354650, ENST00000356013, ENST00000368678, ENST00000523238, NM_002037, uc003pvk.2_5end |
EntrezGene: | FYN |
HGNC: | 4037 |
UniProt: | Q5R3A8P06241E5RFM0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 3.87e-15 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.87e-15 | 42 |
mature alpha-beta T cell | 2.39e-12 | 18 |
alpha-beta T cell | 2.39e-12 | 18 |
immature T cell | 2.39e-12 | 18 |
mature T cell | 2.39e-12 | 18 |
immature alpha-beta T cell | 2.39e-12 | 18 |
leukocyte | 7.76e-11 | 136 |
hematopoietic lineage restricted progenitor cell | 9.82e-10 | 120 |
defensive cell | 1.09e-09 | 48 |
phagocyte | 1.09e-09 | 48 |
nongranular leukocyte | 2.61e-09 | 115 |
CD8-positive, alpha-beta T cell | 4.62e-08 | 11 |
T cell | 5.47e-08 | 25 |
pro-T cell | 5.47e-08 | 25 |
granulocyte monocyte progenitor cell | 5.78e-07 | 67 |