FFCP PHASE1:Hg19::chr5:88178983..88179012,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4208 | |EntrezGene=4208 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6996 | |HGNC=6996 | ||
|TSSclassifier=strong | |||
|UniProt=D6RJG6 | |UniProt=D6RJG6 | ||
|association_with_transcript=0bp_to_ENST00000506554,ENST00000510942,ENST00000511086_5end | |association_with_transcript=0bp_to_ENST00000506554,ENST00000510942,ENST00000511086_5end | ||
|cluster_id=chr5:88178983..88179012,- | |||
|coexpression_cluster_id=C1165 | |||
|description=CAGE_peak_1_at_MEF2C_5end | |description=CAGE_peak_1_at_MEF2C_5end | ||
|id=chr5:88178983..88179012,- | |id=chr5:88178983..88179012,- | ||
|ontology_enrichment_celltype=CL:0000037!2.80e-21!172;CL:0000566!2.80e-21!172;CL:0002032!7.90e-20!165;CL:0000837!7.90e-20!165;CL:0000763!1.30e-19!112;CL:0000049!1.30e-19!112;CL:0000988!1.89e-19!182;CL:0002057!8.26e-16!42;CL:0000738!2.60e-14!140;CL:0002087!5.28e-14!119;CL:0002009!7.84e-14!65;CL:0002194!8.46e-14!63;CL:0000576!8.46e-14!63;CL:0000040!8.46e-14!63;CL:0000559!8.46e-14!63;CL:0000945!3.98e-13!24;CL:0000826!3.98e-13!24;CL:0000766!5.83e-13!76;CL:0000860!6.35e-13!45;CL:0000557!1.88e-11!71;CL:0002031!6.58e-11!124;CL:0000839!1.37e-10!70;CL:0000236!1.69e-09!14 | |ontology_enrichment_celltype=CL:0000037!2.80e-21!172;CL:0000566!2.80e-21!172;CL:0002032!7.90e-20!165;CL:0000837!7.90e-20!165;CL:0000763!1.30e-19!112;CL:0000049!1.30e-19!112;CL:0000988!1.89e-19!182;CL:0002057!8.26e-16!42;CL:0000738!2.60e-14!140;CL:0002087!5.28e-14!119;CL:0002009!7.84e-14!65;CL:0002194!8.46e-14!63;CL:0000576!8.46e-14!63;CL:0000040!8.46e-14!63;CL:0000559!8.46e-14!63;CL:0000945!3.98e-13!24;CL:0000826!3.98e-13!24;CL:0000766!5.83e-13!76;CL:0000860!6.35e-13!45;CL:0000557!1.88e-11!71;CL:0002031!6.58e-11!124;CL:0000839!1.37e-10!70;CL:0000236!1.69e-09!14 | ||
|ontology_enrichment_celltype_v019=CL:0000945;2.55e-13;24!CL:0000576;7.78e-12;48!CL:0000860;9.14e-12;33!CL:0002057;9.14e-12;33!CL:0000473;1.49e-10;39!CL:0000234;1.49e-10;39!CL:0000236;4.94e-09;13!CL:0000763;5.53e-09;100!CL:0000766;4.91e-08;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,9.06e-24,168;CL:0000763,2.47e-22,108;CL:0000049,2.47e-22,108;CL:0002032,3.45e-22,161;CL:0000837,3.45e-22,161;CL:0000988,1.17e-21,177;CL:0000473,1.12e-16,48;CL:0000234,1.12e-16,48;CL:0002194,1.46e-16,59;CL:0000576,1.46e-16,59;CL:0000040,1.46e-16,59;CL:0000559,1.46e-16,59;CL:0002009,1.52e-16,61;CL:0000738,2.26e-16,136;CL:0002087,4.94e-16,115;CL:0000860,5.07e-16,42;CL:0002057,5.07e-16,42;CL:0000766,1.90e-15,72;CL:0000557,7.90e-14,67;CL:0000945,2.68e-13,24;CL:0000826,2.68e-13,24;CL:0000839,7.43e-13,66;CL:0002031,1.11e-12,120;CL:0000236,1.29e-09,14 | |||
|ontology_enrichment_development_v019=CL:0002057;1.18e-11;42!CL:0000049;3.39e-08;108 | |||
|ontology_enrichment_disease=DOID:8692!3.62e-09!31;DOID:2531!1.79e-07!51;DOID:0060083!1.79e-07!51 | |ontology_enrichment_disease=DOID:8692!3.62e-09!31;DOID:2531!1.79e-07!51;DOID:0060083!1.79e-07!51 | ||
|ontology_enrichment_disease_v019=DOID:8692;3.94e-09;31 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,2.30e-09,31;DOID:2531,1.27e-07,51;DOID:0060083,1.27e-07,51;DOID:1240,4.23e-07,39 | |||
|ontology_enrichment_uberon=UBERON:0007023!7.38e-34!115;UBERON:0003080!1.58e-17!42;UBERON:0002780!2.86e-17!41;UBERON:0001890!2.86e-17!41;UBERON:0006240!2.86e-17!41;UBERON:0001049!3.49e-17!57;UBERON:0005068!3.49e-17!57;UBERON:0006241!3.49e-17!57;UBERON:0007135!3.49e-17!57;UBERON:0001893!1.72e-15!34;UBERON:0001869!4.83e-15!32;UBERON:0002791!6.97e-15!33;UBERON:0001017!7.25e-15!82;UBERON:0002616!1.03e-14!59;UBERON:0002193!1.03e-14!112;UBERON:0002619!1.14e-14!22;UBERON:0002020!1.17e-14!34;UBERON:0003528!1.17e-14!34;UBERON:0001950!3.88e-14!20;UBERON:0002390!6.65e-14!102;UBERON:0003061!6.65e-14!102;UBERON:0000956!1.26e-13!25;UBERON:0000203!1.26e-13!25;UBERON:0005743!1.98e-13!86;UBERON:0000955!8.57e-13!69;UBERON:0006238!8.57e-13!69;UBERON:0001474!4.60e-11!86;UBERON:0000479!7.08e-11!787;UBERON:0002371!9.41e-11!80;UBERON:0000073!1.35e-10!94;UBERON:0001016!1.35e-10!94;UBERON:0002405!2.04e-08!115;UBERON:0003075!2.22e-08!86;UBERON:0007284!2.22e-08!86;UBERON:0002346!8.78e-08!90;UBERON:0003081!1.03e-07!216;UBERON:0004765!1.25e-07!101;UBERON:0001434!1.25e-07!101;UBERON:0003056!1.38e-07!61 | |ontology_enrichment_uberon=UBERON:0007023!7.38e-34!115;UBERON:0003080!1.58e-17!42;UBERON:0002780!2.86e-17!41;UBERON:0001890!2.86e-17!41;UBERON:0006240!2.86e-17!41;UBERON:0001049!3.49e-17!57;UBERON:0005068!3.49e-17!57;UBERON:0006241!3.49e-17!57;UBERON:0007135!3.49e-17!57;UBERON:0001893!1.72e-15!34;UBERON:0001869!4.83e-15!32;UBERON:0002791!6.97e-15!33;UBERON:0001017!7.25e-15!82;UBERON:0002616!1.03e-14!59;UBERON:0002193!1.03e-14!112;UBERON:0002619!1.14e-14!22;UBERON:0002020!1.17e-14!34;UBERON:0003528!1.17e-14!34;UBERON:0001950!3.88e-14!20;UBERON:0002390!6.65e-14!102;UBERON:0003061!6.65e-14!102;UBERON:0000956!1.26e-13!25;UBERON:0000203!1.26e-13!25;UBERON:0005743!1.98e-13!86;UBERON:0000955!8.57e-13!69;UBERON:0006238!8.57e-13!69;UBERON:0001474!4.60e-11!86;UBERON:0000479!7.08e-11!787;UBERON:0002371!9.41e-11!80;UBERON:0000073!1.35e-10!94;UBERON:0001016!1.35e-10!94;UBERON:0002405!2.04e-08!115;UBERON:0003075!2.22e-08!86;UBERON:0007284!2.22e-08!86;UBERON:0002346!8.78e-08!90;UBERON:0003081!1.03e-07!216;UBERON:0004765!1.25e-07!101;UBERON:0001434!1.25e-07!101;UBERON:0003056!1.38e-07!61 | ||
|ontology_enrichment_uberon_v019=UBERON:0002619;7.02e-15;22!UBERON:0001950;2.45e-14;20!UBERON:0001869;7.52e-14;32!UBERON:0000956;7.72e-14;25!UBERON:0000203;7.72e-14;25!UBERON:0001893;1.14e-13;34!UBERON:0002791;2.27e-13;32!UBERON:0003528;6.04e-13;34!UBERON:0002020;6.04e-13;34!UBERON:0002780;8.50e-13;41!UBERON:0001890;8.50e-13;41!UBERON:0000073;6.08e-10;53!UBERON:0002616;6.08e-10;53!UBERON:0007023;3.98e-09;114!UBERON:0001017;5.53e-07;75 | |||
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| ||
|short_description=p1@MEF2C | |short_description=p1@MEF2C | ||
}} | }} |
Latest revision as of 03:48, 19 September 2015
Short description: | p1@MEF2C |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_MEF2C_5end |
Coexpression cluster: | C1165_occipital_parietal_duodenum_temporal_brain_medial_frontal |
Association with transcript: | 0bp_to_ENST00000506554, ENST00000510942, ENST00000511086_5end |
EntrezGene: | MEF2C |
HGNC: | 6996 |
UniProt: | D6RJG6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 9.06e-24 | 168 |
myeloid cell | 2.47e-22 | 108 |
common myeloid progenitor | 2.47e-22 | 108 |
hematopoietic oligopotent progenitor cell | 3.45e-22 | 161 |
hematopoietic multipotent progenitor cell | 3.45e-22 | 161 |
hematopoietic cell | 1.17e-21 | 177 |
defensive cell | 1.12e-16 | 48 |
phagocyte | 1.12e-16 | 48 |
monopoietic cell | 1.46e-16 | 59 |
monocyte | 1.46e-16 | 59 |
monoblast | 1.46e-16 | 59 |
promonocyte | 1.46e-16 | 59 |
macrophage dendritic cell progenitor | 1.52e-16 | 61 |
leukocyte | 2.26e-16 | 136 |
nongranular leukocyte | 4.94e-16 | 115 |
classical monocyte | 5.07e-16 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.07e-16 | 42 |
myeloid leukocyte | 1.90e-15 | 72 |
granulocyte monocyte progenitor cell | 7.90e-14 | 67 |
lymphocyte of B lineage | 2.68e-13 | 24 |
pro-B cell | 2.68e-13 | 24 |
myeloid lineage restricted progenitor cell | 7.43e-13 | 66 |
hematopoietic lineage restricted progenitor cell | 1.11e-12 | 120 |
B cell | 1.29e-09 | 14 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 2.30e-09 | 31 |
hematologic cancer | 1.27e-07 | 51 |
immune system cancer | 1.27e-07 | 51 |
leukemia | 4.23e-07 | 39 |