FFCP PHASE1:Hg19::chr5:82833713..82833727,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr5:82833713..82833727,+ | |||
|coexpression_cluster_id=C456 | |||
|description=CAGE_peak_at_chr5:82833713..82833727,+ | |description=CAGE_peak_at_chr5:82833713..82833727,+ | ||
|id=chr5:82833713..82833727,+ | |id=chr5:82833713..82833727,+ | ||
|ontology_enrichment_celltype=CL:0002057!2.82e-17!42;CL:0000860!2.73e-15!45;CL:0000048!5.00e-12!430;CL:0000034!1.71e-11!444;CL:0000723!2.83e-11!436;CL:0000055!5.66e-11!180;CL:0000057!7.84e-09!75;CL:0002194!2.98e-08!63;CL:0000576!2.98e-08!63;CL:0000040!2.98e-08!63;CL:0000559!2.98e-08!63;CL:0002009!1.09e-07!65;CL:0000134!3.79e-07!358;CL:0002320!8.16e-07!365 | |ontology_enrichment_celltype=CL:0002057!2.82e-17!42;CL:0000860!2.73e-15!45;CL:0000048!5.00e-12!430;CL:0000034!1.71e-11!444;CL:0000723!2.83e-11!436;CL:0000055!5.66e-11!180;CL:0000057!7.84e-09!75;CL:0002194!2.98e-08!63;CL:0000576!2.98e-08!63;CL:0000040!2.98e-08!63;CL:0000559!2.98e-08!63;CL:0002009!1.09e-07!65;CL:0000134!3.79e-07!358;CL:0002320!8.16e-07!365 | ||
|ontology_enrichment_celltype_v019=CL:0000860;3.25e-14;33!CL:0002057;3.25e-14;33!CL:0000473;1.22e-10;39!CL:0000234;1.22e-10;39!CL:0000576;2.50e-10;48!CL:1000306;3.56e-09;4!CL:0002547;3.56e-09;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.18e-17,42;CL:0002057,2.18e-17,42;CL:0000473,9.15e-15,48;CL:0000234,9.15e-15,48;CL:0002194,4.15e-11,59;CL:0000576,4.15e-11,59;CL:0000040,4.15e-11,59;CL:0000559,4.15e-11,59;CL:0002009,1.22e-10,61;CL:0000839,1.37e-09,66;CL:0000557,2.12e-09,67;CL:0000048,2.16e-09,427;CL:0000134,2.82e-09,354;CL:0000723,4.04e-09,433;CL:1000306,5.30e-09,4;CL:0002547,5.30e-09,4;CL:0002320,6.45e-09,361;CL:0000034,9.06e-09,441;CL:0000766,1.58e-08,72;CL:0000219,1.18e-07,386;CL:0000057,2.41e-07,76 | |||
|ontology_enrichment_development_v019=CL:0002057;8.46e-13;42 | |||
|ontology_enrichment_disease=DOID:2394!1.60e-10!14 | |ontology_enrichment_disease=DOID:2394!1.60e-10!14 | ||
|ontology_enrichment_disease_v019=DOID:2394;2.21e-09;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,2.73e-09,14 | |||
|ontology_enrichment_uberon=UBERON:0002204!3.99e-11!167;UBERON:0000468!5.41e-09!659;UBERON:0000467!2.42e-07!625;UBERON:0000480!2.99e-07!626;UBERON:0003081!5.29e-07!216;UBERON:0002384!8.76e-07!375 | |ontology_enrichment_uberon=UBERON:0002204!3.99e-11!167;UBERON:0000468!5.41e-09!659;UBERON:0000467!2.42e-07!625;UBERON:0000480!2.99e-07!626;UBERON:0003081!5.29e-07!216;UBERON:0002384!8.76e-07!375 | ||
|ontology_enrichment_uberon_v019=UBERON:0004797;3.56e-09;4!UBERON:0000415;3.56e-09;4!UBERON:0007240;3.56e-09;4!UBERON:0005742;3.56e-09;4!UBERON:0005734;3.56e-09;4!UBERON:0004664;3.56e-09;4!UBERON:0004663;3.56e-09;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,3.63e-09,371;UBERON:0002371,3.64e-09,76;UBERON:0000415,5.30e-09,4;UBERON:0007240,5.30e-09,4;UBERON:0005742,5.30e-09,4;UBERON:0005734,5.30e-09,4;UBERON:0004664,5.30e-09,4;UBERON:0004663,5.30e-09,4;UBERON:0003081,1.04e-08,203;UBERON:0002390,2.26e-08,98;UBERON:0003061,2.26e-08,98;UBERON:0001474,3.04e-08,82;UBERON:0000926,6.31e-08,315;UBERON:0004120,6.31e-08,315;UBERON:0006603,6.31e-08,315;UBERON:0002193,3.08e-07,108;UBERON:0004765,3.28e-07,90;UBERON:0002405,7.18e-07,93 | |||
|phase1_expression=0.363356758541113,1.2846031433459,0.563817616383885,0,0,3.48935409640147,0,0,0,0,0,0,0,0,0.662794751455832,0.672325146451775,0.602694528023977,0,1.46379839637152,0.123121058076788,0,0,0.286235987131057,0.136874425072884,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,1.66198622559563,1.20326668482085,0.868043482863407,0,0,0,2.03557534291391,0.377875943688809,0.242584061187816,1.85943229524548,0.411167888021826,0.929119112685311,2.3015391385772,0.256160706529101,0.945928919554341,0.689491361473237,0.645484683583826,0,2.25890807451126,1.09162460023138,1.12361742222542,3.36692281607993,0.962787081228281,0.639337125799041,2.63881040149373,0.797854630486527,0,5.22376629531451,0,0,3.01498398308092,3.65038042894141,0.434377689410233,3.63239701580021,0.368277635987565,0,0,0,0.209658645508376,0.898629049171961,0.901061357049038,1.44653028027372,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34140171940727,0.12786256184353,0,0.50133791063589,0.289693037921647,0.795285947051099,0.486634870302636,0.189069634328136,0.443458794925128,0.351339142772504,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.48485975847659,1.01304409331664,0.926864265692532,3.44203944898576,1.41867352879343,0.560677600142307,1.06748995729705,0.24666754841716,0,0.269421344139376,0.163461903113459,0,0,0,0.312160076830321,0,0.149448680551801,0,0,0,0,0.122834317311768,0,1.18800285728205,0.494533858557114,0,0,0,0,0,0,0.612975591598039,0.300476117813194,0.113432183160021,1.07633781413317,0.427114777637135,0,0.600182192168805,0,0.257640540045629,0,0.168776332241266,0.292311015483596,0,0.276149695926898,0.161646056818812,1.06502877754984,0.201504196455281,0,0,0,0,0.121973706129595,0.530119073285941,0.464775771478074,0,0,0,1.56449532329816,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.939269553886573,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.904902010304444,0,0,0.26593811658487,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0.199945982364114,0,0,0,0,0,0,0.289562613335158,0,0.179060963239896,0,0,0,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0.415941723061614,0.892144943985809,0.157702415033935,0.234282829985426,0,0,0,0,0,0,0,0,0.206768026122887,0.862856803274467,0.213455115606889,0,0,0,0.744323423456331,1.07423381301644,1.12264037773229,0.512556597022804,1.53512174720011,1.44768529029247,0,0.925258162815933,0.355123450626254,0.328508624055237,0,0.116210378459959,0,0.200506470303285,0,0.114814448164607,0,0,0,0.0770153371044148,0,0,0.211103257785751,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0,0,0,0,0.193341436584244,0,0,0.137836572484531,0.214840489736547,0.580066775656914,0.255679882248303,0.356128142586949,0,0.384380134730212,0.127612712494584,0,0,4.09256050879832,0,0,0.532306030317022,0,0.18532421910392,0.286249773483982,0,0.316379424718726,0.190630193923825,0,0,0,0,0.359744915166629,0.274537029736055,0,0,0,0.421258456238981,0,0,1.05650146756755,0.272999822815972,0.424216295861138,2.26016233240486,0.551365343546124,0,0.876901770507525,0,0,0.202910376962704,0,0.281695602532241,0.143411352204052,0.0982490410131212,0,0,0.633322905892992,0.987884678879706,0,0,0,0,0,0,0,0,0,0,0,1.52927441428475,0.569647187174163,0,0.411362273086194,0,0,1.58625035258854,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0.140669416410513,0.111308705022906,0.16480387422676,0,0.19924798825107,0,0,0,0,0.622079175323615,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0.0769502585037971,0.341826167541004,0,0,0,0,0.549585560411174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0.702793337176017,0,0,0,0,0,0.30607276163049,0.31593289814244,0,0.103688191397247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189932387867636,0,0,0,0,0,0,0,0,0,0,0.135904206073614,0,0,0,0,0.136905378891993,0,1.71906176567983,0,0.558564802544508,0.458320848023367,0,0,0,0,0.0671834724867263,1.08089965062721,0,0,0,0.0674035438541849,0.0984274815147488,0,0,0.408610218334727,0.321506296930038,0.137539436597234,0.83088067605837,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,1.72844298240254,0.326587360109409,0,0,0.170388021785422,0,0,0,0.129282956361551,0.26446520348538,0,0,0.106787412567695,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0.110929051536852,0,0,0.124980407962107,0,0,0,0,0,1.34329322598187,0,0.554805861502613,0.189403005275089,0.50313580350515,1.77962244319307,0.915360273587694,0.151230923763239,3.41961841282117,1.03498604992744,0.477890301491107,0,0.621051827505038,2.48823724704513,3.19010057469594,0.521745061811734,0.901545653983311,1.14241563650639,1.22061219961398,0.545545977607678,0.644463342254931,0.464033759878494,1.19428766609585,0.400027764663154,0.686791410365586,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,1.79369063011563,0,0,0.138258436151731,0,0,0,0.655219697692825,0,0,0,0,0,0,0.184105950251841,0,0,0,0,0.157265941855896,0.109209638192014,0,0,0,0,0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| ||
|short_description=p@chr5:82833713..82833727,+ | |short_description=p@chr5:82833713..82833727,+ | ||
}} | }} |
Latest revision as of 16:56, 30 July 2015
Short description: | p@chr5:82833713..82833727, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:82833713..82833727, + |
Coexpression cluster: | C456_Fibroblast_Smooth_CD14_Preadipocyte_Lens_mesenchymal_serous |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 2.18e-17 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.18e-17 | 42 |
defensive cell | 9.15e-15 | 48 |
phagocyte | 9.15e-15 | 48 |
monopoietic cell | 4.15e-11 | 59 |
monocyte | 4.15e-11 | 59 |
monoblast | 4.15e-11 | 59 |
promonocyte | 4.15e-11 | 59 |
macrophage dendritic cell progenitor | 1.22e-10 | 61 |
myeloid lineage restricted progenitor cell | 1.37e-09 | 66 |
granulocyte monocyte progenitor cell | 2.12e-09 | 67 |
multi fate stem cell | 2.16e-09 | 427 |
mesenchymal cell | 2.82e-09 | 354 |
somatic stem cell | 4.04e-09 | 433 |
fibroblast of tunica adventitia of artery | 5.30e-09 | 4 |
fibroblast of the aortic adventitia | 5.30e-09 | 4 |
connective tissue cell | 6.45e-09 | 361 |
stem cell | 9.06e-09 | 441 |
myeloid leukocyte | 1.58e-08 | 72 |
motile cell | 1.18e-07 | 386 |
fibroblast | 2.41e-07 | 76 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 3.63e-09 | 371 |
bone marrow | 3.64e-09 | 76 |
artery wall | 5.30e-09 | 4 |
tunica adventitia of artery | 5.30e-09 | 4 |
adventitia | 5.30e-09 | 4 |
tunica adventitia of blood vessel | 5.30e-09 | 4 |
aorta tunica adventitia | 5.30e-09 | 4 |
aorta wall | 5.30e-09 | 4 |
lateral plate mesoderm | 1.04e-08 | 203 |
hematopoietic system | 2.26e-08 | 98 |
blood island | 2.26e-08 | 98 |
bone element | 3.04e-08 | 82 |
mesoderm | 6.31e-08 | 315 |
mesoderm-derived structure | 6.31e-08 | 315 |
presumptive mesoderm | 6.31e-08 | 315 |
hemolymphoid system | 3.08e-07 | 108 |
skeletal element | 3.28e-07 | 90 |
immune system | 7.18e-07 | 93 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 2.73e-09 | 14 |