FFCP PHASE1:Hg19::chr5:31855176..31855226,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23037 | |EntrezGene=23037 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18486 | |HGNC=18486 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=133bp_to_ENST00000502489,uc011cnx.1_5end | |association_with_transcript=133bp_to_ENST00000502489,uc011cnx.1_5end | ||
|cluster_id=chr5:31855176..31855226,+ | |||
|coexpression_cluster_id=C40 | |||
|description=CAGE_peak_6_at_PDZD2_5end | |description=CAGE_peak_6_at_PDZD2_5end | ||
|id=chr5:31855176..31855226,+ | |id=chr5:31855176..31855226,+ | ||
|ontology_enrichment_celltype=CL:0000039!2.17e-09!7;CL:0000586!2.17e-09!7 | |ontology_enrichment_celltype=CL:0000039!2.17e-09!7;CL:0000586!2.17e-09!7 | ||
|ontology_enrichment_celltype_v019=CL:0000039;2.22e-21;7!CL:0000586;2.22e-21;7!CL:0000540;9.65e-07;6!CL:0000404;9.65e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,6.67e-22,7;CL:0000586,6.67e-22,7 | |||
|ontology_enrichment_development_v019=UBERON:0009117;1.12e-14;10!UBERON:0005564;1.12e-14;10!UBERON:0003056;9.46e-14;3!CL:0000031;9.65e-07;6 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3095;6.17e-11;22!DOID:2994;6.17e-11;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,4.25e-11,22;DOID:2994,4.25e-11,22 | |||
|ontology_enrichment_uberon=UBERON:0007023!4.01e-21!115;UBERON:0000073!2.55e-17!94;UBERON:0001016!2.55e-17!94;UBERON:0005743!1.41e-16!86;UBERON:0003075!5.20e-16!86;UBERON:0007284!5.20e-16!86;UBERON:0001017!7.08e-16!82;UBERON:0002346!1.28e-14!90;UBERON:0001049!2.69e-14!57;UBERON:0005068!2.69e-14!57;UBERON:0006241!2.69e-14!57;UBERON:0007135!2.69e-14!57;UBERON:0000153!3.31e-14!129;UBERON:0007811!3.31e-14!129;UBERON:0000955!6.02e-14!69;UBERON:0006238!6.02e-14!69;UBERON:0002616!1.81e-13!59;UBERON:0000033!3.63e-13!123;UBERON:0004121!4.16e-12!169;UBERON:0003056!5.31e-12!61;UBERON:0000924!2.23e-11!173;UBERON:0006601!2.23e-11!173;UBERON:0003080!2.29e-10!42;UBERON:0003135!1.03e-09!11;UBERON:0002780!1.28e-09!41;UBERON:0001890!1.28e-09!41;UBERON:0006240!1.28e-09!41;UBERON:0002298!1.54e-08!8;UBERON:0000064!2.84e-08!219;UBERON:0002020!1.18e-07!34;UBERON:0003528!1.18e-07!34;UBERON:0000473!1.78e-07!8;UBERON:0001893!1.83e-07!34;UBERON:0003133!2.10e-07!48;UBERON:0000062!2.14e-07!511;UBERON:0002791!4.38e-07!33;UBERON:0004176!5.03e-07!22;UBERON:0000468!7.11e-07!659;UBERON:0004732!9.85e-07!13 | |ontology_enrichment_uberon=UBERON:0007023!4.01e-21!115;UBERON:0000073!2.55e-17!94;UBERON:0001016!2.55e-17!94;UBERON:0005743!1.41e-16!86;UBERON:0003075!5.20e-16!86;UBERON:0007284!5.20e-16!86;UBERON:0001017!7.08e-16!82;UBERON:0002346!1.28e-14!90;UBERON:0001049!2.69e-14!57;UBERON:0005068!2.69e-14!57;UBERON:0006241!2.69e-14!57;UBERON:0007135!2.69e-14!57;UBERON:0000153!3.31e-14!129;UBERON:0007811!3.31e-14!129;UBERON:0000955!6.02e-14!69;UBERON:0006238!6.02e-14!69;UBERON:0002616!1.81e-13!59;UBERON:0000033!3.63e-13!123;UBERON:0004121!4.16e-12!169;UBERON:0003056!5.31e-12!61;UBERON:0000924!2.23e-11!173;UBERON:0006601!2.23e-11!173;UBERON:0003080!2.29e-10!42;UBERON:0003135!1.03e-09!11;UBERON:0002780!1.28e-09!41;UBERON:0001890!1.28e-09!41;UBERON:0006240!1.28e-09!41;UBERON:0002298!1.54e-08!8;UBERON:0000064!2.84e-08!219;UBERON:0002020!1.18e-07!34;UBERON:0003528!1.18e-07!34;UBERON:0000473!1.78e-07!8;UBERON:0001893!1.83e-07!34;UBERON:0003133!2.10e-07!48;UBERON:0000062!2.14e-07!511;UBERON:0002791!4.38e-07!33;UBERON:0004176!5.03e-07!22;UBERON:0000468!7.11e-07!659;UBERON:0004732!9.85e-07!13 | ||
|ontology_enrichment_uberon_v019=UBERON:0000473;6.21e-13;8!UBERON:0001905;3.98e-10;2!UBERON:0002757;3.98e-10;2!UBERON:0010134;3.98e-10;2!UBERON:0005408;3.98e-10;2!UBERON:0001899;3.98e-10;2!UBERON:0003135;2.51e-09;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,4.28e-13,8;UBERON:0001905,4.00e-10,2;UBERON:0002757,4.00e-10,2;UBERON:0010134,4.00e-10,2;UBERON:0005408,4.00e-10,2;UBERON:0001899,4.00e-10,2;UBERON:0003135,1.93e-09,11;UBERON:0000966,4.04e-07,6;UBERON:0005388,4.04e-07,6;UBERON:0001802,4.04e-07,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246242116153576,0.204000691244253,0.626909442956176,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0,0,0,0,0,0,0.378139268656271,1.10864698731282,0.351339142772504,0.523916301990851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.516833518338658,1.06729878806013,0,0,0,1.22031028774085,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134710672069688,0,0.454072282934794,0,0,0,0,0,0,0,0.140450806702248,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.70763188581434,1.19276791489337,0.464775771478074,0.518305275076852,0.756962552626885,1.82488679537915,0,0,0,0,0,0,0,0.241011029883482,0.110293972732394,0.217879444092406,0,0,0.196221465125346,0,0,0,0.4115740113314,0,0,0,0,0,0,0,0.109750285408626,0,0,0.462942225792648,0,0,0,0.811512834825538,0.117408694235822,0.288732895522148,0,0,0,0,0,0,0,0,0.16798212819886,0.283550194484773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299918973546171,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0,0,0,0,0,0.167516265334349,0,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0,0,0,0,0.200506470303285,0,0,0,0,0,0,0,0,0.316654886678627,0,0,0.215915916102139,0,0,0.501689773854853,0.254876273045038,0,0.447749509444357,0,0.261435451024901,0.769350375349168,0,0,0.103041011647722,0,0,0,0,0,0,0.308097234229289,0.15350367472613,0,0,0,0,0,0,0.384380134730212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.349934720244983,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,1.38871292465715,0,0,0,0,0,0,0,0,0,0,0,0,0,2.50634477090067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17206543417515,0,0,0.284136146806413,0,0,0,0,0.140669416410513,0,0,0,0.19924798825107,0,0.251932747854276,0,0,0,0.179736702294654,0,0,0,0,0,0,0.0927680981618513,0,0,0,1.44999915086959,0,0,0.236387681767936,0,0,0,0,0.844175070377856,0,0,0,0.438770794307945,0,3.20674611840788,0.307801034015188,0,5.30296980092538,5.65473159781564,1.73835795075213,0.31900115973192,0.183195186803725,1.06606955203727,0,0,0,0,0,0,0,0,0,0.489698424477443,0,0,0,0.353830258013357,0,0,0,0,0.539209063845416,0,0.234264445725339,0,0.19566461893209,0,0.394584402849391,1.20990716048664,0.30607276163049,0.189559738885464,0.150323419414493,0,0,0,0,0,0,0,0,0.489961987071888,0.261177619741208,0.34945333648406,0,0.387025325156341,0.0730893170861856,0.328461828212837,0.0969890164884194,0,14.2367866691735,0,0,0.253243183823515,0.195551382734803,0.0801588202515337,0.213452994739353,0,0,0,0,0,0,0.471388069233591,0,0.209205692624666,0,0,1.20084057741958,0,0,0,0,0.279282401272254,0,0,0.399358000997982,0,0.223171457441873,0.470284307407084,0,0,0,0,0,0,0,0,0.681017030557878,2.08979093004525,1.10031549277787,1.24632101408756,0,0,0.242998226632099,1.0063040627978,0.0788057072991982,0.83927341015997,0,0,0.191915197319445,0,0,0,0,0,0,0,0,0,0.79318464064088,0,0,0.775697738169303,0.39669780522807,0,0,0.320362237703084,0.471612915298998,1.24271716604159,0,0,0,0,1.08803560673895,0,0,1.63936315354902,0,0,0,0.1251909307065,1.14681839138014,0.887432412294818,0.745156835296601,4.42715631795939,0.249960815924213,0,0,0,0.468334905806882,0,0,0,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0,0.521745061811734,0,0,0,0,0.214821114084977,0,0.398095888698616,0,0,0,0,0,12.8664954824955,0.260994291965212,0,0.231522474323834,0,0,1.54400723580486,0.438568099157414,0,0.771656153083659,0.168942440653073,0,0,0,0.138258436151731,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0,0,1.27894371303652,1.07824811396682,0.157265941855896,0,0,0,0,0,0,0,0,0,0,0.385375350578757,0,0.798169295285756,0,0.252071696221718,0.276629009856872,0,1.42769420259154,0,0.11796972334774,1.10057159113007,1.03973099535304,0,0,0,0.300841313397029,0,0,1.83334686136996,0,0.295712172434091,0.135075169236789,0,0.206686796501184,0.253663240775627,0,0,0.496211178389294,0,0,16.0710550763486,9.07966049990825,0,0.455324382702595,0.443511850813194,0,0,0.203909198930495,0.131545547125698,0,0.111231401892069,0,0,0,1.82631744101899,1.07963795609311,0,25.0882670060064,5.21444918717998,0,0,0,0,0,0,0.430227358820278,0,0,0.423387050190929,0.68732060563215,0,0,3.69122924932715,0,0,0,0.102662806856247,0,0,0,0.397901550322736,0,0,11.5437542582701,0,0.0771741581079447,0,0,0,0,0.392616934229891,0,0,0,0.0939839179798536,0.128915775947154,0,0,0,0,0,0,0.573358332605805,0,0.0679914901909147,0.436350690340377,0,0,0,0,0.252332849670158,0.437062287854782,0.126698501011437,1.73381010561369,0.801652215796681,7.99485625953151,1.50424523575425,1.13668047327359,2.14371304124943,0,0.103432995861895,0.639701945702943,0.23806443146374,0.0645889098360061,0.0620747142958579,0,0.12729431655633,0.404234377916439,0.217716747896961,0.342233301085281,0.404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| ||
|short_description=p6@PDZD2 | |short_description=p6@PDZD2 | ||
}} | }} |
Latest revision as of 15:08, 17 September 2015
Short description: | p6@PDZD2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_PDZD2_5end |
Coexpression cluster: | C40_eye_retina_Lens_pineal_tongue_retinoblastoma_small |
Association with transcript: | 133bp_to_ENST00000502489, uc011cnx.1_5end |
EntrezGene: | PDZD2 |
HGNC: | 18486 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 6.67e-22 | 7 |
germ cell | 6.67e-22 | 7 |
Ontology term | p-value | n |
---|---|---|
testis | 4.28e-13 | 8 |
pineal body | 4.00e-10 | 2 |
regional part of epithalamus | 4.00e-10 | 2 |
secretory circumventricular organ | 4.00e-10 | 2 |
circumventricular organ | 4.00e-10 | 2 |
epithalamus | 4.00e-10 | 2 |
male reproductive organ | 1.93e-09 | 11 |
retina | 4.04e-07 | 6 |
photoreceptor array | 4.04e-07 | 6 |
posterior segment of eyeball | 4.04e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 4.25e-11 | 22 |
germ cell cancer | 4.25e-11 | 22 |