FFCP PHASE1:Hg19::chr5:180018601..180018622,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=92304 | |EntrezGene=92304 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18384 | |HGNC=18384 | ||
|TSSclassifier=strong | |||
|UniProt=Q96QR1 | |UniProt=Q96QR1 | ||
|association_with_transcript=-61bp_to_ENST00000292641_5end | |association_with_transcript=-61bp_to_ENST00000292641_5end | ||
|cluster_id=chr5:180018601..180018622,- | |||
|coexpression_cluster_id=C4490 | |||
|description=CAGE_peak_5_at_SCGB3A1_5end | |description=CAGE_peak_5_at_SCGB3A1_5end | ||
|id=chr5:180018601..180018622,- | |id=chr5:180018601..180018622,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000875;6.92e-20;3!CL:0002396;6.92e-20;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000875,6.94e-20,3;CL:0002396,6.94e-20,3;CL:0002393,5.78e-07,9;CL:0002397,5.78e-07,9 | |||
|ontology_enrichment_development_v019=UBERON:0006298;2.79e-08;1!UBERON:0008801;3.20e-08;1!UBERON:0006242;6.10e-08;1!UBERON:0010227;1.26e-07;1!UBERON:0005425;1.26e-07;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.49e-21!115;UBERON:0000153!8.30e-09!129;UBERON:0007811!8.30e-09!129;UBERON:0003887!4.48e-08!21;UBERON:0006555!3.71e-07!17;UBERON:0005103!3.71e-07!17;UBERON:0000083!3.71e-07!17;UBERON:0009201!3.71e-07!17;UBERON:0004819!3.71e-07!17;UBERON:0006553!3.71e-07!17;UBERON:0003074!3.71e-07!17;UBERON:0003060!3.71e-07!17;UBERON:0004876!4.60e-07!20 | |ontology_enrichment_uberon=UBERON:0007023!4.49e-21!115;UBERON:0000153!8.30e-09!129;UBERON:0007811!8.30e-09!129;UBERON:0003887!4.48e-08!21;UBERON:0006555!3.71e-07!17;UBERON:0005103!3.71e-07!17;UBERON:0000083!3.71e-07!17;UBERON:0009201!3.71e-07!17;UBERON:0004819!3.71e-07!17;UBERON:0006553!3.71e-07!17;UBERON:0003074!3.71e-07!17;UBERON:0003060!3.71e-07!17;UBERON:0004876!4.60e-07!20 | ||
|ontology_enrichment_uberon_v019=UBERON:0001829;8.41e-15;2!UBERON:0003127;1.14e-14;2!UBERON:0000341;7.06e-14;2!UBERON:0000007;7.06e-14;2!UBERON:0001044;6.69e-11;6!UBERON:0003293;6.69e-11;6!UBERON:0003294;6.69e-11;6!UBERON:0010047;6.69e-11;6!UBERON:0003408;6.69e-11;6!UBERON:0000167;6.69e-11;6!UBERON:0002110;1.50e-09;3!UBERON:0001736;2.79e-08;1!UBERON:0001831;3.20e-08;1!UBERON:0001567;3.20e-08;1!UBERON:0002171;4.07e-08;1!UBERON:0006518;4.07e-08;1!UBERON:0008949;4.07e-08;1!UBERON:0000101;4.07e-08;1!UBERON:0002167;4.07e-08;1!UBERON:0001301;6.10e-08;1!UBERON:0002079;1.26e-07;1!UBERON:0000941;1.26e-07;1!UBERON:0001785;1.26e-07;1!UBERON:0002464;1.26e-07;1!UBERON:0004904;1.26e-07;1!UBERON:0001021;1.26e-07;1!UBERON:0003296;2.27e-07;4!UBERON:0010133;2.27e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001829,7.88e-15,2;UBERON:0003127,1.18e-14,2;UBERON:0000341,5.44e-14,2;UBERON:0000007,7.07e-14,2;UBERON:0001044,6.59e-11,6;UBERON:0003293,6.59e-11,6;UBERON:0003294,6.59e-11,6;UBERON:0010047,6.59e-11,6;UBERON:0000167,6.59e-11,6;UBERON:0007023,5.67e-10,114;UBERON:0002110,1.06e-09,3;UBERON:0006242,1.06e-09,3;UBERON:0001736,2.70e-08,1;UBERON:0006298,2.70e-08,1;UBERON:0001831,3.10e-08,1;UBERON:0001567,3.10e-08,1;UBERON:0008801,3.10e-08,1;UBERON:0002171,4.07e-08,1;UBERON:0006518,4.07e-08,1;UBERON:0008949,4.07e-08,1;UBERON:0000101,4.07e-08,1;UBERON:0002167,4.07e-08,1;UBERON:0001301,6.10e-08,1;UBERON:0002079,1.35e-07,1;UBERON:0000941,1.44e-07,1;UBERON:0001785,1.44e-07,1;UBERON:0002464,1.44e-07,1;UBERON:0004904,1.44e-07,1;UBERON:0001021,1.44e-07,1;UBERON:0003902,1.44e-07,1;UBERON:0005425,1.44e-07,1;UBERON:0003296,2.27e-07,4;UBERON:0010133,2.27e-07,4 | |||
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| ||
|short_description=p5@SCGB3A1 | |short_description=p5@SCGB3A1 | ||
}} | }} |
Latest revision as of 10:45, 17 September 2015
Short description: | p5@SCGB3A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_SCGB3A1_5end |
Coexpression cluster: | C4490_trachea_parotid_submaxillary_salivary_throat_aorta_lung |
Association with transcript: | -61bp_to_ENST00000292641_5end |
EntrezGene: | SCGB3A1 |
HGNC: | 18384 |
UniProt: | Q96QR1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
non-classical monocyte | 6.94e-20 | 3 |
CD14-low, CD16-positive monocyte | 6.94e-20 | 3 |
intermediate monocyte | 5.78e-07 | 9 |
CD14-positive, CD16-positive monocyte | 5.78e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
major salivary gland | 7.88e-15 | 2 |
open tracheal system trachea | 1.18e-14 | 2 |
throat | 5.44e-14 | 2 |
pituitary gland | 7.07e-14 | 2 |
saliva-secreting gland | 6.59e-11 | 6 |
gland of oral region | 6.59e-11 | 6 |
gland of foregut | 6.59e-11 | 6 |
oral gland | 6.59e-11 | 6 |
oral cavity | 6.59e-11 | 6 |
adult organism | 5.67e-10 | 114 |
gallbladder | 1.06e-09 | 3 |
gall bladder primordium | 1.06e-09 | 3 |
submandibular gland | 2.70e-08 | 1 |
submandibular gland primordium | 2.70e-08 | 1 |
parotid gland | 3.10e-08 | 1 |
cheek | 3.10e-08 | 1 |
parotid gland primordium | 3.10e-08 | 1 |
lower lobe of right lung | 4.07e-08 | 1 |
right lung lobe | 4.07e-08 | 1 |
lower lobe of lung | 4.07e-08 | 1 |
lobe of lung | 4.07e-08 | 1 |
right lung | 4.07e-08 | 1 |
epididymis | 6.10e-08 | 1 |
left cardiac atrium | 1.35e-07 | 1 |
cranial nerve II | 1.44e-07 | 1 |
cranial nerve | 1.44e-07 | 1 |
nerve trunk | 1.44e-07 | 1 |
nerve connecting eye with brain | 1.44e-07 | 1 |
nerve | 1.44e-07 | 1 |
retinal neural layer | 1.44e-07 | 1 |
presumptive neural retina | 1.44e-07 | 1 |
gland of diencephalon | 2.27e-07 | 4 |
neuroendocrine gland | 2.27e-07 | 4 |