FFCP PHASE1:Hg19::chr5:176735063..176735088,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=83463 | |EntrezGene=83463 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14008 | |HGNC=14008 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000509339_5end | |association_with_transcript=0bp_to_ENST00000509339_5end | ||
|cluster_id=chr5:176735063..176735088,- | |||
|coexpression_cluster_id=C299 | |||
|description=CAGE_peak_2_at_MXD3_5end | |description=CAGE_peak_2_at_MXD3_5end | ||
|id=chr5:176735063..176735088,- | |id=chr5:176735063..176735088,- | ||
|ontology_enrichment_celltype=CL:0002057!2.84e-61!42;CL:0000860!3.67e-56!45;CL:0000037!2.22e-46!172;CL:0000566!2.22e-46!172;CL:0000766!8.05e-46!76;CL:0000738!1.98e-45!140;CL:0000988!2.09e-42!182;CL:0002032!6.84e-41!165;CL:0000837!6.84e-41!165;CL:0002087!4.17e-39!119;CL:0000763!5.25e-39!112;CL:0000049!5.25e-39!112;CL:0002194!1.56e-38!63;CL:0000576!1.56e-38!63;CL:0000040!1.56e-38!63;CL:0000559!1.56e-38!63;CL:0002009!6.68e-37!65;CL:0000557!2.47e-34!71;CL:0000839!3.09e-33!70;CL:0002031!2.90e-32!124;CL:0002393!7.44e-16!9;CL:0002397!7.44e-16!9;CL:0000094!2.11e-14!8;CL:0000134!8.46e-11!358;CL:0002320!3.58e-10!365;CL:0000081!6.74e-10!11;CL:0000219!5.11e-08!390 | |ontology_enrichment_celltype=CL:0002057!2.84e-61!42;CL:0000860!3.67e-56!45;CL:0000037!2.22e-46!172;CL:0000566!2.22e-46!172;CL:0000766!8.05e-46!76;CL:0000738!1.98e-45!140;CL:0000988!2.09e-42!182;CL:0002032!6.84e-41!165;CL:0000837!6.84e-41!165;CL:0002087!4.17e-39!119;CL:0000763!5.25e-39!112;CL:0000049!5.25e-39!112;CL:0002194!1.56e-38!63;CL:0000576!1.56e-38!63;CL:0000040!1.56e-38!63;CL:0000559!1.56e-38!63;CL:0002009!6.68e-37!65;CL:0000557!2.47e-34!71;CL:0000839!3.09e-33!70;CL:0002031!2.90e-32!124;CL:0002393!7.44e-16!9;CL:0002397!7.44e-16!9;CL:0000094!2.11e-14!8;CL:0000134!8.46e-11!358;CL:0002320!3.58e-10!365;CL:0000081!6.74e-10!11;CL:0000219!5.11e-08!390 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.27e-68;33!CL:0002057;1.27e-68;33!CL:0000576;6.24e-55;48!CL:0000473;1.53e-47;39!CL:0000234;1.53e-47;39!CL:0000766;1.67e-38;69!CL:0000094;4.24e-24;8!CL:0000763;7.02e-19;100!CL:0002087;9.93e-19;104!CL:0002393;5.49e-18;6!CL:0002397;5.49e-18;6!CL:0000081;4.39e-17;11!CL:0000738;1.66e-12;136!CL:0000875;2.22e-10;3!CL:0000775;2.22e-10;3!CL:0002396;2.22e-10;3!CL:0000767;1.02e-09;3!CL:0000988;1.12e-09;177!CL:0000226;7.35e-09;3!CL:0000842;7.35e-09;3!CL:0000771;1.99e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,4.58e-102,42;CL:0002057,4.58e-102,42;CL:0000473,6.74e-88,48;CL:0000234,6.74e-88,48;CL:0000766,3.12e-82,72;CL:0002194,4.56e-68,59;CL:0000576,4.56e-68,59;CL:0000040,4.56e-68,59;CL:0000559,4.56e-68,59;CL:0002009,1.65e-65,61;CL:0000557,9.01e-62,67;CL:0000839,8.74e-60,66;CL:0000738,1.55e-58,136;CL:0000763,1.63e-55,108;CL:0000049,1.63e-55,108;CL:0002087,6.27e-50,115;CL:0000037,2.07e-48,168;CL:0002032,3.07e-45,161;CL:0000837,3.07e-45,161;CL:0000988,3.14e-45,177;CL:0002031,5.38e-41,120;CL:0002393,1.16e-26,9;CL:0002397,1.16e-26,9;CL:0000094,4.19e-24,8;CL:0000081,4.35e-17,11;CL:0000134,1.73e-15,354;CL:0002320,6.53e-15,361;CL:0000219,6.90e-13,386;CL:0000048,2.00e-10,427;CL:0000875,2.22e-10,3;CL:0000775,2.22e-10,3;CL:0002396,2.22e-10,3;CL:0000723,4.36e-10,433;CL:0000767,1.01e-09,3;CL:0000034,1.19e-09,441;CL:0000226,7.56e-09,3;CL:0000842,7.56e-09,3;CL:0000771,1.99e-07,2 | |||
|ontology_enrichment_development_v019=CL:0002057;2.05e-71;42!CL:0000049;2.23e-16;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.10e-45!102;UBERON:0003061!2.10e-45!102;UBERON:0002193!6.17e-41!112;UBERON:0002371!3.03e-30!80;UBERON:0001474!4.17e-27!86;UBERON:0002405!9.64e-24!115;UBERON:0004765!6.15e-21!101;UBERON:0001434!6.15e-21!101;UBERON:0000178!4.29e-15!15;UBERON:0000179!4.29e-15!15;UBERON:0000463!4.29e-15!15;UBERON:0003081!2.02e-13!216;UBERON:0002384!2.50e-09!375;UBERON:0007023!3.97e-09!115;UBERON:0002204!1.41e-08!167 | |ontology_enrichment_uberon=UBERON:0002390!2.10e-45!102;UBERON:0003061!2.10e-45!102;UBERON:0002193!6.17e-41!112;UBERON:0002371!3.03e-30!80;UBERON:0001474!4.17e-27!86;UBERON:0002405!9.64e-24!115;UBERON:0004765!6.15e-21!101;UBERON:0001434!6.15e-21!101;UBERON:0000178!4.29e-15!15;UBERON:0000179!4.29e-15!15;UBERON:0000463!4.29e-15!15;UBERON:0003081!2.02e-13!216;UBERON:0002384!2.50e-09!375;UBERON:0007023!3.97e-09!115;UBERON:0002204!1.41e-08!167 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.52e-26;15!UBERON:0000179;2.52e-26;15!UBERON:0000463;2.52e-26;15!UBERON:0002390;3.97e-16;32!UBERON:0002193;1.20e-08;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,8.24e-77,98;UBERON:0003061,8.24e-77,98;UBERON:0002193,1.72e-68,108;UBERON:0002371,3.20e-53,76;UBERON:0001474,1.49e-48,82;UBERON:0002405,4.92e-46,93;UBERON:0004765,2.72e-43,90;UBERON:0001434,6.85e-38,100;UBERON:0003081,3.76e-30,203;UBERON:0000178,2.65e-26,15;UBERON:0000179,2.65e-26,15;UBERON:0000463,2.65e-26,15;UBERON:0002204,2.10e-18,167;UBERON:0000926,1.20e-14,315;UBERON:0004120,1.20e-14,315;UBERON:0006603,1.20e-14,315;UBERON:0002384,3.97e-14,371 | |||
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|short_description=p2@MXD3 | |short_description=p2@MXD3 | ||
}} | }} |
Latest revision as of 05:56, 17 September 2015
Short description: | p2@MXD3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_MXD3_5end |
Coexpression cluster: | C299_CD14CD16_Eosinophils_Neutrophils_CD14_Whole_Basophils_blood |
Association with transcript: | 0bp_to_ENST00000509339_5end |
EntrezGene: | MXD3 |
HGNC: | 14008 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 8.24e-77 | 98 |
blood island | 8.24e-77 | 98 |
hemolymphoid system | 1.72e-68 | 108 |
bone marrow | 3.20e-53 | 76 |
bone element | 1.49e-48 | 82 |
immune system | 4.92e-46 | 93 |
skeletal element | 2.72e-43 | 90 |
skeletal system | 6.85e-38 | 100 |
lateral plate mesoderm | 3.76e-30 | 203 |
blood | 2.65e-26 | 15 |
haemolymphatic fluid | 2.65e-26 | 15 |
organism substance | 2.65e-26 | 15 |
musculoskeletal system | 2.10e-18 | 167 |
mesoderm | 1.20e-14 | 315 |
mesoderm-derived structure | 1.20e-14 | 315 |
presumptive mesoderm | 1.20e-14 | 315 |
connective tissue | 3.97e-14 | 371 |