FFCP PHASE1:Hg19::chr5:17221493..17221497,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr5:17221493..17221497,+ | |||
|coexpression_cluster_id=C3218 | |||
|description=CAGE_peak_at_chr5:17221493..17221497,+ | |description=CAGE_peak_at_chr5:17221493..17221497,+ | ||
|id=chr5:17221493..17221497,+ | |id=chr5:17221493..17221497,+ | ||
|ontology_enrichment_celltype=CL:0000766!3.18e-31!76;CL:0000860!3.43e-28!45;CL:0002057!1.07e-26!42;CL:0002194!8.15e-26!63;CL:0000576!8.15e-26!63;CL:0000040!8.15e-26!63;CL:0000559!8.15e-26!63;CL:0002009!4.89e-25!65;CL:0000738!9.10e-25!140;CL:0000557!1.98e-24!71;CL:0000839!3.12e-24!70;CL:0002087!1.73e-21!119;CL:0002031!4.12e-19!124;CL:0000763!7.68e-14!112;CL:0000049!7.68e-14!112;CL:0002032!1.47e-13!165;CL:0000837!1.47e-13!165;CL:0000037!3.29e-13!172;CL:0000566!3.29e-13!172;CL:0000988!2.17e-12!182 | |ontology_enrichment_celltype=CL:0000766!3.18e-31!76;CL:0000860!3.43e-28!45;CL:0002057!1.07e-26!42;CL:0002194!8.15e-26!63;CL:0000576!8.15e-26!63;CL:0000040!8.15e-26!63;CL:0000559!8.15e-26!63;CL:0002009!4.89e-25!65;CL:0000738!9.10e-25!140;CL:0000557!1.98e-24!71;CL:0000839!3.12e-24!70;CL:0002087!1.73e-21!119;CL:0002031!4.12e-19!124;CL:0000763!7.68e-14!112;CL:0000049!7.68e-14!112;CL:0002032!1.47e-13!165;CL:0000837!1.47e-13!165;CL:0000037!3.29e-13!172;CL:0000566!3.29e-13!172;CL:0000988!2.17e-12!182 | ||
|ontology_enrichment_celltype_v019=CL:0000860;6.00e-36;33!CL:0002057;6.00e-36;33!CL:0000576;1.86e-30;48!CL:0000473;7.98e-27;39!CL:0000234;7.98e-27;39!CL:0000766;3.56e-22;69!CL:0002087;2.14e-12;104!CL:0000094;4.08e-11;8!CL:0000081;1.36e-09;11!CL:0000763;1.87e-09;100!CL:0000738;9.08e-09;136!CL:0002393;2.16e-08;6!CL:0002397;2.16e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.58e-49,42;CL:0002057,2.58e-49,42;CL:0000766,1.06e-48,72;CL:0000473,9.53e-46,48;CL:0000234,9.53e-46,48;CL:0002194,2.24e-42,59;CL:0000576,2.24e-42,59;CL:0000040,2.24e-42,59;CL:0000559,2.24e-42,59;CL:0002009,2.08e-40,61;CL:0000839,1.73e-37,66;CL:0000557,1.15e-36,67;CL:0000738,2.02e-36,136;CL:0002087,9.32e-34,115;CL:0002031,8.95e-29,120;CL:0000763,1.10e-25,108;CL:0000049,1.10e-25,108;CL:0000988,4.79e-25,177;CL:0000037,1.10e-24,168;CL:0002032,7.07e-24,161;CL:0000837,7.07e-24,161;CL:0000094,3.29e-11,8;CL:0002393,1.06e-10,9;CL:0002397,1.06e-10,9;CL:0000081,1.16e-09,11 | |||
|ontology_enrichment_development_v019=CL:0002057;3.33e-35;42!CL:0000049;3.91e-08;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.26e-23!102;UBERON:0003061!1.26e-23!102;UBERON:0001474!4.65e-21!86;UBERON:0002371!5.05e-21!80;UBERON:0004765!1.39e-19!101;UBERON:0001434!1.39e-19!101;UBERON:0002193!4.06e-19!112;UBERON:0002405!1.72e-10!115;UBERON:0002204!2.23e-09!167 | |ontology_enrichment_uberon=UBERON:0002390!1.26e-23!102;UBERON:0003061!1.26e-23!102;UBERON:0001474!4.65e-21!86;UBERON:0002371!5.05e-21!80;UBERON:0004765!1.39e-19!101;UBERON:0001434!1.39e-19!101;UBERON:0002193!4.06e-19!112;UBERON:0002405!1.72e-10!115;UBERON:0002204!2.23e-09!167 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.25e-35,98;UBERON:0003061,1.25e-35,98;UBERON:0001474,1.06e-31,82;UBERON:0002371,1.75e-31,76;UBERON:0002193,2.37e-30,108;UBERON:0004765,2.99e-27,90;UBERON:0001434,5.52e-25,100;UBERON:0002405,1.16e-24,93;UBERON:0002204,4.91e-12,167;UBERON:0003081,2.67e-10,203 | |||
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|short_description=p@chr5:17221493..17221497,+ | |short_description=p@chr5:17221493..17221497,+ | ||
}} | }} |
Latest revision as of 13:09, 30 July 2015
Short description: | p@chr5:17221493..17221497, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:17221493..17221497, + |
Coexpression cluster: | C3218_CD14_Neutrophils_Eosinophils_Peripheral_Monocytederived_CD19_parietal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 2.58e-49 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.58e-49 | 42 |
myeloid leukocyte | 1.06e-48 | 72 |
defensive cell | 9.53e-46 | 48 |
phagocyte | 9.53e-46 | 48 |
monopoietic cell | 2.24e-42 | 59 |
monocyte | 2.24e-42 | 59 |
monoblast | 2.24e-42 | 59 |
promonocyte | 2.24e-42 | 59 |
macrophage dendritic cell progenitor | 2.08e-40 | 61 |
myeloid lineage restricted progenitor cell | 1.73e-37 | 66 |
granulocyte monocyte progenitor cell | 1.15e-36 | 67 |
leukocyte | 2.02e-36 | 136 |
nongranular leukocyte | 9.32e-34 | 115 |
hematopoietic lineage restricted progenitor cell | 8.95e-29 | 120 |
myeloid cell | 1.10e-25 | 108 |
common myeloid progenitor | 1.10e-25 | 108 |
hematopoietic cell | 4.79e-25 | 177 |
hematopoietic stem cell | 1.10e-24 | 168 |
hematopoietic oligopotent progenitor cell | 7.07e-24 | 161 |
hematopoietic multipotent progenitor cell | 7.07e-24 | 161 |
granulocyte | 3.29e-11 | 8 |
intermediate monocyte | 1.06e-10 | 9 |
CD14-positive, CD16-positive monocyte | 1.06e-10 | 9 |
blood cell | 1.16e-09 | 11 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.25e-35 | 98 |
blood island | 1.25e-35 | 98 |
bone element | 1.06e-31 | 82 |
bone marrow | 1.75e-31 | 76 |
hemolymphoid system | 2.37e-30 | 108 |
skeletal element | 2.99e-27 | 90 |
skeletal system | 5.52e-25 | 100 |
immune system | 1.16e-24 | 93 |
musculoskeletal system | 4.91e-12 | 167 |
lateral plate mesoderm | 2.67e-10 | 203 |